Corynebacterium pseudotuberculosis 3/99-5: Cp3995_0227
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Entry
Cp3995_0227 CDS
T01689
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cpl
Corynebacterium pseudotuberculosis 3/99-5
Brite
KEGG Orthology (KO) [BR:
cpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpl03032
]
Cp3995_0227 (topA)
03400 DNA repair and recombination proteins [BR:
cpl03400
]
Cp3995_0227 (topA)
Enzymes [BR:
cpl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Cp3995_0227 (topA)
DNA replication proteins [BR:
cpl03032
]
Prokaryotic type
DNA Topoisomerases
Cp3995_0227 (topA)
DNA repair and recombination proteins [BR:
cpl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Cp3995_0227 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AEX38700
LinkDB
All DBs
Position
232879..235941
Genome browser
AA seq
1020 aa
AA seq
DB search
MPFPALLVFLDACVGQRCVVDPYYKVPTHFYRAFCELRFSPFMAEKSGPKRLVIVESATK
AKKIAPYLGDDYIVEASVGHIRDLPRGAADVPTKYKKEPWARLGVNTENGFAPLYVVSPD
KKKKVADLKQKLKLVDELLLATDPDREGEAIAWHLLEVLKPKVPVKRMVFNEITKPAILA
AAENTRELDANLVDAQETRRILDRLYGYEVSPVLWKKVMPRLSAGRVQSVATRVIVERER
ERMAFVSAEYWDIEAEFDTGKPDTDGNPHQFTGRLTSVDGKRVATGRDFNDRGELKGDAV
VVNKQRAEALVAELTGAPMNVAKVEEKPYTRRPYAPFMTSTLQQEAGRKLHFTSERTMRI
AQRLYENGHITYMRTDSTTLSEQGLKAAREQAISLYGNDYVAEGPRRYDRKVKNSQEAHE
AIRPAGEHFATPGELHAQLDAEEFKLYELIWQRTVASQMADAKGTSMKVTIAGKNAEFSA
TGRTITFPGFLRAYVEITKLSDGRDLADNAERHLPRLAEGDALDVNKLEVDEHSTNPPAR
YTEASLVKKMEELGIGRPSTYASIIKTIQDRGYVYSRGNALVPSWVAFAVVGLLEKSFSA
LVDYDFTSSMEDELDDIAAGREDGTEWLTGFYFGDAAASDATAESIARHGGLKALVGDNL
EHIDARLVNSLELFQDSEGRAVNVRVGRYGPYIERQIGVSADGEAEYQRANLSDTTTPDE
LTLDVAEKLFATPQSGRELGRNPKNDRMIVAKEGRFGPYVTELVNDDERAQVEAKAEEIV
ASERKAEDEQRAAEGKRAKNWETKTAVKQKEKRIAEIVDETLKPGTASLFKDMEPATVTL
EQALQLLSLPREVGVDPSDNAPITAQNGRYGPYLKKGNDSRSLASEEQIFTITLDEARRI
YAEPKRRGRGATSQSVIKELGDNDVSGKPMSVRDGRFGPYVTDGTTNASLRRGDDPTELT
DARANELLSERRAKEAADGGAEKKATKKAAKKSTKKTTAKKAVKKPAKTTKRVVKAGRKK
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgccttttcctgccttattagtgtttttggatgcttgcgttggacaaaggtgcgtagta
gacccgtactataaggtgccaacgcatttttatcgtgctttttgtgaattgaggttttca
ccttttatggctgaaaagagcggacctaagcgccttgtgatcgtcgagtctgcgacgaag
gctaagaaaattgccccttacttaggcgacgactacatagtcgaggcctccgtggggcac
attcgcgatctcccgcgaggcgctgcagatgttcccactaagtacaaaaaggagccgtgg
gcccggcttggtgtgaacacagagaacggctttgcgcctttgtatgtggttagcccggac
aagaagaagaaagtcgccgatctcaagcaaaagcttaagcttgtcgacgaactcctactg
gccacagaccccgaccgcgagggggaagccatcgcgtggcacttgcttgaggttctcaag
cctaaagtgcccgtgaagcgcatggtgttcaatgagatcactaaaccggcgattctggct
gctgcggagaacactcgtgagttggacgcgaacctggtcgacgcgcaggagactcgtcgt
atcctcgatcgtctctatggctatgaggtctcccctgtgctgtggaagaaagtcatgccg
cggctttctgctggccgcgttcagtcggtggctacccgcgtgatcgttgagcgggagcgt
gagcgtatggcttttgtatccgccgaatactgggacattgaggcggaatttgatacgggt
aagcctgatacggatggcaatccacatcaattcactggccgtcttacctctgtcgacggc
aaacgcgtggctacgggccgcgattttaacgaccgtggcgagcttaaaggcgacgcggtg
gtcgtgaataagcaacgcgctgaggcattggttgcggagctgacaggcgctccaatgaac
gtggccaaggtagaagaaaagccttacactcgtcgcccttatgcgccgtttatgacttca
actttgcagcaagaagctggacgcaagctgcactttacctctgagcgcacgatgcgtatc
gcgcaacgtctgtatgaaaacggccatatcacttatatgcgtacggattccacgacgctg
tcggagcaaggcttaaaagcggctcgggaacaagctatttcgctttacgggaatgattat
gtggcagaagggccgcgtcgttatgaccgaaaagtaaagaactcacaggaggctcacgag
gctatccgtccggcaggagagcattttgctacccctggagagctgcacgcccagctcgat
gccgaggaatttaaactctacgagctcatctggcagcgcaccgtagcttcccaaatggca
gacgccaagggcacatccatgaaggtgaccattgcgggaaagaacgctgagttctccgct
actggacgaacaatcacgttccccggcttcctgcgcgcatacgtggaaatcaccaagctt
tccgacggccgcgaccttgccgataacgccgagcgtcacctgcctcgtctcgctgagggc
gatgccttagacgtgaacaagctggaagtcgacgagcactccaccaatccgcctgcgcgc
tatacagaggcgtcgttggtgaaaaaaatggaggagctgggcatcggacgcccatcgacg
tatgcctcgatcatcaagaccattcaagatcgcggatacgtttactcccgcggtaatgct
ctggtcccaagctgggtagcttttgcggttgtcggtcttttagagaagagcttctctgct
cttgtcgactacgatttcacctcgtcgatggaagatgagctggatgatatcgccgcagga
cgagaagacggtactgagtggctcactggcttctattttggagatgccgcagcctccgat
gccaccgcagaatctattgcacgtcacggcgggcttaaagcacttgtcggcgacaacctc
gagcatattgacgcgcgtttggttaactccttagaactcttccaagactcagaaggccgt
gccgttaatgtccgcgttggtcggtacggcccctatatcgaacggcagatcggcgtcagt
gctgatggcgaggccgagtatcagcgcgccaatctctcagacaccaccaccccagacgag
ctgaccctcgatgtggcggagaaactgtttgcgactccgcaatctggccgtgagctgggc
agaaaccccaagaacgatcgcatgattgtggccaaggaagggcgttttgggccttacgtc
accgagttggttaacgatgatgagcgtgctcaggtggaagccaaagcagaggagatcgtc
gcctctgagcgcaaagctgaggatgagcagcgtgctgccgaaggcaaacgcgccaagaac
tgggagactaaaactgcagttaagcagaaagaaaagcggatcgctgagatcgtcgatgag
actctgaagccaggcaccgcctcactgttcaaggatatggagccagccacagttacgctt
gagcaagccctccagcttttgtccttgccacgcgaggtgggagttgatcctagcgataat
gcacccattaccgcgcagaacggtcgctatggcccctacctgaaaaagggtaatgactcg
cgctcgctggccagcgaagagcaaatctttactatcactctggatgaggcccgccgaatt
tacgctgagcctaaacgacgcggccgaggcgctacctcccagtctgtgattaaagaacta
ggcgataatgacgtctccggcaagccaatgtccgtgcgtgatggacgttttgggccttat
gtaaccgatggcactaccaatgcttctttgcgacgaggcgacgaccccacggagcttaca
gacgctcgtgctaacgagctactttcggaacgccgtgccaaggaggctgcggacggtggc
gcagaaaagaaagctacgaaaaaagctgcgaagaagtccaccaagaaaaccacggcgaaa
aaagccgtgaaaaaacctgcaaagactacaaaacgagtggtcaaagctggacgtaagaaa
tag
DBGET
integrated database retrieval system
