Chiloscyllium plagiosum (whitespotted bambooshark): 122539257
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Entry
122539257 CDS
T08871
Symbol
wrn
Name
(RefSeq) Werner syndrome ATP-dependent helicase homolog
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpla03032
]
122539257 (wrn)
03400 DNA repair and recombination proteins [BR:
cpla03400
]
122539257 (wrn)
Enzymes [BR:
cpla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
122539257 (wrn)
DNA replication proteins [BR:
cpla03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
122539257 (wrn)
DNA repair and recombination proteins [BR:
cpla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
122539257 (wrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
122539257
NCBI-ProteinID:
XP_043529893
LinkDB
All DBs
Position
32:complement(29342784..29425853)
Genome browser
AA seq
1328 aa
AA seq
DB search
MFPLSDEQQRYAATDAYAGFLIYEKLNTLDVNRGKLIISNDDQKLHPSIYLRSNLISLAC
EMQKLAEIVPVSYASGVQRAADIFNMISENVSALRTILLESTPGSGAEEEKEIKSEICTN
NRAEKVHFENDLESNQNTSGSYQEVKHEDRLTESPLDLQIGKQVCEPCSESHGNDPNESR
VSKECNQNKREDYLMSLAITEYELQMLEQQAEAEDAVENTISSLPIKSPNAAEEADLSYV
IESDEELENEMLEALQNLDSSSELETEASLKNLPDEVDGTEEFCGVEDEEDESIKEEEDK
WDASIPEPNAKQIKCLKTYFGHSNFKPVQWKVIYSVLQERRDNLVVMATGYGKSLCYQFP
AIYTGGITVVISPLISLMEDQVLQLNMSNVAACFLGSSQSKNLSHELTKGHFKVVYMTPE
FCSGSVSLLKKLDDSVGITLVAVDEAHCISEWGHDFRNSYRKLGTLKDFLPQTPVVALTA
TASPSIRCDIIESLRLKNPRIVCTTFDRPNLYLEVGSKSSDIQQDLKPFLIKRDTFTFEF
EGPTIVYCPSRKTTEQVAEELSRMNIVCGMYHAGMGIKARRDVHHKFMRDEIQCVVATIA
FGMGINKPDIRKVIHYGAPKEMESYYQEIGRAGRDGLPSACHVLWSPADMMLNRRLLSEI
KSPKFRAYKIKMMEKIKKYLTSSKCRRNIILSHFEDEQLRKATLGIIGTDRCCDNCRLRV
DSCTLADDLENEMQEFGKEVYQLLSAVRILGEKFGIGVPVLFLRGSHSQRLPDRHRNHHL
FGSGKNHPENWWKALGQQLIIEGFLQEKSSFNRFATINTLTAKGRNWLNKAANESCRTLR
LQATKELCPPIPPKAQVQPTTVRSISSQQSSPLASHLELQVSISHLIFFLERMDNKCWPA
SNAHIPQMNKKSVFQGWQGETCCVGKSEAFPMWNETLMEQSLRNKFGREKGKENEKLFSA
AAVKSRFFVPPSSGSPIKSIPPQQVTSPKQLELEGKLYGKLLSARQKIAIEKDVPPAILA
TNKILLDFAKIRPSTADNLKRIDGVSEAKSGVLAPLLNTIREFCQANELEMDKFSVSTHV
ANQPFVHLNSTSGHVFPSKTRDSSNLTVPVVGHCSADALKSRYSKNVSQAGTHQPVQELN
INIIPDPPVTSDLSSLQSVEKQHNGERTGQPESSCAETKSLPLGTQAEELTWIETAGKHI
STCQKVQPGVSSLCLASWNQPDNDTIDLFDDLPTEKKHADAEKPDVTSFIQTTESSESVP
RNVSSTNLASWSQPLIDVSVGDLFDNSQKEICSQSTKRKLPDWFGSSNPQKISCTTKKKV
KKGKGLFS
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atgtttccactaagtgatgagcaacagcgatatgcagctactgatgcctatgctggtttt
ctaatttatgaaaaattgaacactttggatgtgaacagaggaaaactgattattagtaat
gatgatcagaaattgcacccttccatttatttaagatctaacctgatctctcttgcctgt
gaaatgcagaaactagctgaaattgttcctgtttcgtatgctagtggtgtacagagagct
gcagatatcttcaacatgatctctgaaaatgtttctgctttacggaccattttacttgaa
tcaacaccagggagtggtgcagaagaggagaaagaaataaaatctgaaatatgtacaaac
aatcgagctgaaaaagtccattttgaaaatgatttagaaagtaatcagaatacaagtggg
agctaccaagaagtgaagcatgaagatcgtttgactgaatcaccattagatctccagatt
ggcaagcaagtttgtgaaccatgctcagaatcccatgggaatgatccgaatgagagtcgt
gtttctaaagaatgcaaccagaataaacgtgaggattacctgatgtctttagccataact
gaatatgagcttcaaatgttggagcaacaggcagaagcagaagatgcagtggaaaatact
atttcctctttgccaatcaagtcacctaatgctgctgaagaagctgatctctcttatgtg
attgaaagtgatgaggagttggagaatgaaatgcttgaggcattgcagaatttggatagc
agttctgaattggagactgaagcatctctcaagaatttacctgatgaagttgatggaact
gaagaattttgtggggtggaggatgaagaagatgaaagcattaaggaagaggaggacaaa
tgggatgcttcaatacctgagccaaatgcaaaacagatcaagtgcctgaagacttatttt
ggacattctaattttaaaccggtacaatggaaggttatctattcagtacttcaggagaga
agagataatcttgtcgttatggcaactggttatggtaagagtttatgctaccagttccca
gccatttacacaggagggattacagtagtaatttcgcctcttatctctttgatggaggac
caagtactgcaactgaacatgtccaatgtagcagcttgtttccttggctcttcgcagtcg
aaaaatctttcccatgaactgacaaagggtcatttcaaagttgtttatatgactcctgaa
ttctgttcaggatctgtttcattactcaagaaacttgatgacagtgttggtataactctt
gttgctgtggatgaggctcactgtatctctgaatggggacatgattttagaaattcatac
agaaaacttggaaccttgaaagattttctgccacagactccagttgttgctttgactgcc
actgccagcccttcaatcagatgtgacatcatagagagtctgagactgaagaaccctcgg
attgtctgtactacatttgaccgacccaacctgtatttagaagttggctctaaatcttca
gacattcagcaagatttaaagccatttttaattaaaagggacacgttcacttttgagttt
gaaggtcccactatagtttactgcccgtccaggaaaaccacagaacaagtggctgaagag
ttgtcacggatgaatattgtttgcggtatgtaccatgcaggcatgggcatcaaagcgagg
agagacgtccatcacaagtttatgagggatgaaattcagtgtgtggtggctaccattgct
tttggcatggggattaacaagcctgatattcgtaaagtcattcattatggagctcctaaa
gaaatggaatcctactatcaagaaattgggagagctgggcgagatggtttgcccagtgct
tgtcatgtcttatggtctcctgctgacatgatgttaaacagacggctgctgagtgagatt
aaaagcccaaagttccgtgcctacaaaattaagatgatggaaaaaataaagaaatacctc
acatcatcaaagtgcagaagaaatattatcttgtcccattttgaagatgaacagctcaga
aaggctacccttgggatcattggcactgatagatgttgtgacaattgtagattaagagtt
gatagctgcactttggcagatgacctagaaaatgaaatgcaagaatttgggaaggaagtg
tatcaactgttatctgcagtccgtattttaggagaaaagtttggcattggagttcctgtt
ctgttcttgcgaggatcccactcccagcgtttgccagacaggcatcgtaatcaccatctg
tttggcagtggaaagaaccatcctgaaaactggtggaaggcattgggtcagcagctcatt
attgagggcttcctgcaagaaaaatccagcttcaacagatttgctactataaatactctg
actgccaagggaagaaattggttaaataaggcagctaatgaatcctgtcgcactctacga
cttcaagccactaaagagctgtgtccacctattccacccaaagctcaggttcaacctaca
accgtgcgttcaatatcctctcaacaatcttctccattggccagtcatttggagcttcag
gtttctatttctcatttaattttcttcttggaaaggatggacaataaatgctggccagcc
agcaatgcccacatcccacaaatgaataaaaaaagtgtttttcagggatggcagggtgaa
acatgttgtgtgggcaagtcagaggctttcccgatgtggaatgagacactgatggaacag
tcactgcgcaacaagtttggacgagagaagggaaaagagaatgaaaagctgttttcagca
gctgcagttaaaagccgtttctttgttccaccttcgtctggttcaccgataaaatccatt
ccccctcaacaagtcacatcacctaagcaactggaactggaaggcaagttatacggcaaa
ttgttatcagcaaggcagaaaattgccattgagaaggatgttcccccagctattttggct
acaaataaaatactgctggactttgccaagataaggccgtcgactgctgacaatctgaaa
cgaattgatggggtatctgaagccaaatctggtgtgttggctcccctcctgaatactatc
agggaattctgtcaagctaatgaattggagatggacaagttttctgtttcaactcacgtg
gcaaatcaaccattcgtccatctgaactctacgtcaggccatgtgtttccaagtaaaact
agagattcaagcaacttgactgtacctgtagttggtcactgttcggctgatgcactgaaa
tctcgttactcaaagaatgtcagtcaagctggcactcatcaaccagttcaggagctgaac
atcaatatcattccagatcctccagtgacatcagatctcagcagtttgcaatctgttgag
aagcagcacaatggtgaacgtacgggacagccagaaagttcttgtgctgaaacaaaatct
ctaccacttggcactcaagcggaagaactaacctggattgaaacagctggaaaacacatc
agcacttgtcaaaaagttcaacctggcgtatcctctctttgtttggcatcatggaaccaa
ccagacaatgacacaattgatttatttgatgatctgcccacagagaagaagcatgcagat
gcagaaaaacctgatgtgacatctttcatccagactactgagagcagtgagagcgttcca
agaaatgtatcctctactaacttagcatcatggagccagccattgattgatgtttctgtg
ggcgatttgttcgataattcacagaaagagatatgcagtcagtcaacaaaaaggaaactg
ccagattggtttggctcttcaaatccacagaaaatctcctgtaccaccaagaagaaagtg
aagaaagggaaaggacttttcagttga
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