Chiloscyllium plagiosum (whitespotted bambooshark): 122539346
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Entry
122539346 CDS
T08871
Name
(RefSeq) protocadherin-10-like isoform X1
KO
K16499
protocadherin delta 2
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpla04515
]
122539346
Cell adhesion molecules [BR:
cpla04515
]
Cadherins
Protocadherins
122539346
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
DUF5478
Motif
Other DBs
NCBI-GeneID:
122539346
NCBI-ProteinID:
XP_043530024
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Position
32:complement(14164824..14221308)
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AA seq
985 aa
AA seq
DB search
MLVWCLLVCIWWDSVASQIRYSVPEEQEHGTFVGNIAEDLGLDVTKLAARRFQTVASSRS
PHLEVNLENGVLFVNEKIDREELCKQSPSCLLHLEVFLENPLELFRVEIEIVDINDNAPA
FPEADLTVEISESASAGTRLPLESAFDPDVGSNSLRTYQITPNGYFELDVQTQGDGNKFA
ELVLEKPLDREQQALHRYVLTAVDGGLPQRTGTALLTVRVLDSNDNVPVFGQPVYTVSLE
ENSPPGTLLLQLNATDRDEGKNGEVVYSFSSHVSARVKELFSLDPRTGWLEVKGDVDYEE
SSLHQLYVQAKDLGPNAVPAHCKVLVRVTDVNDNAPEISFSTVSEAVSEAAAPGTVVALL
SVTDRDSGDNGQLHCEILGQVPFQLKSSFKNYYTVVTDGPLDREHGDSYTITVLARDRGS
PPLASSKSIRVQVGDENDNAPRFSEASYDVYVSENNVPGAYIYAVSAADPDLGQNAYISY
SILECDIQGMSVFTYVSINSENGYLYALRSFDYEQLKEFRFTVQALDSGSPALGSNATVN
ILIVDQNDNAPSIVSPVARNGSSRELVPRSAEPGYLVVRLVAVDADDGENARLTFYIARG
NELGLFRMDWRSGELKTARRFPAASAAPYELLIEVRDHGQPPLSATASVLVLAVDSAVER
PGERGNRAGSPKDNALDLTLILIIALGSVSFVFLLAMIMLAVRCQKDKKLNLSSCLAGEG
CACCRQARNRKKKLSKSDIMLVQTSNANAAQVSVEEGGFGHHSQNYCYQVCLTPESAKTD
LMFLKPCSPSRSTDAEHNSCGAIIAGYTDQQPDIISNGSILSNEIKHQRTELSFLVDRPR
RVNSSAFQEADIVSSKDSGHGDSEQGDSDHDATNRAQNSGADLFSNCTEECKALGHSDRC
WMPTFVPTDGRQGPDYRSNLHVPGMDSVPDTEVYEAPEQTGEKSFSTFGKEKSHPSNLEK
KEYDALLPNTRAPYKPPYLTRKRIC
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgttagtgtggtgtctcctggtttgcatctggtgggactcggtcgcctctcagatccgc
tactcggtgcccgaggagcaggagcatggcaccttcgtgggcaacatcgccgaggacttg
ggtctggacgtgaccaagttggcggcgcgccgcttccagacggtggccagctcccggtcc
cctcacctggaggtgaacctggagaacggcgtcctgttcgtcaacgagaagatcgaccgg
gaggagctgtgcaagcagagcccgagctgcctgctgcacctcgaggtcttcctggagaac
ccgctggagctcttccgcgtcgagatcgagatcgtggacatcaacgacaacgcccccgcc
ttcccggaggccgacctgacggtggagatctccgagagcgcgtcggccggcacccgcctg
ccgctggagagcgccttcgacccggacgtgggcagcaactcgctgcggacctaccagatc
accccgaacggctacttcgagctggacgtgcagacccaaggggacgggaacaagttcgcc
gagctggtgctggagaagccgctggaccgggagcagcaggcgctgcaccggtatgtgctg
accgcagtagacggcggcttgccccagcggaccgggaccgccctgctcaccgtcagggtg
ctggactccaacgataacgtgccggtgttcggccagccggtgtacaccgtcagcctggag
gagaactcgcctcccggcacgctgctgctgcagctcaacgccaccgatcgggacgagggg
aagaacggcgaggtggtctactcgttcagcagccacgtctcggcccgggtcaaggagctg
ttcagcctggatccccgcaccggctggttggaggtgaagggggacgtggattacgaggag
agcagtttgcaccagctgtacgtgcaagccaaggacctgggccccaacgcggtaccggct
cactgcaaggtgctggtgcgggtcaccgacgtgaacgacaacgcaccggagatcagcttc
agcaccgtgtccgaggcggtgagcgaggcggcggctccgggcaccgtggtggctctgctc
agcgtcaccgaccgggactcgggggacaacgggcagctgcactgcgagatcctgggccag
gtgcccttccagctcaagtcctccttcaagaactactacacggtggtgacggacgggccg
ctggaccgggagcacggcgactcgtacaccatcacggtgctggcgcgggaccgcggctcg
cccccgctggcctccagcaagtccatcagggtgcaggtgggcgacgagaacgacaacgcg
ccgcggttctccgaggcttcctacgacgtgtatgtgagcgagaataacgtgcccggggcg
tacatctacgcggtgagcgccgctgacccggacctgggccagaacgcctacatctcctac
tccatcctggagtgtgacatccagggcatgtcggtgttcacctacgtctccatcaactcg
gagaacggctacctgtacgcgctgcgctccttcgactatgagcagctcaaggagttccgc
ttcaccgtgcaagccctggactcgggcagcccggcgctgggctccaacgccaccgtcaac
atcctcatcgtggaccagaacgacaacgcgccgtccatcgtctccccggtggcccgcaac
ggcagctcccgggagctggtgccccgctccgccgagcccggttacctggtggtccgcctg
gtggcggtggacgcggacgacggcgagaacgcccggctgaccttctacatcgcccgcggc
aacgagctcggcctcttccgcatggactggcggagcggcgagctgaagaccgcccggcgc
ttccccgccgccagcgccgccccgtacgagctcctgatcgaggtgagggaccacgggcag
ccgccgctctccgccaccgccagcgtcttggtgttggcggtggacagcgcggtcgagcgg
cccggggagaggggcaaccgagccggcagccccaaggacaacgcgctggacctgaccctc
atcctgatcatcgcgctgggctcggtctccttcgtcttcctgctggccatgatcatgttg
gccgtccgctgtcagaaggacaagaagctgaacctgtccagctgcctggccggagagggc
tgtgcatgctgccgccaggccaggaaccgtaagaagaagctcagcaagtcagacatcatg
ctagtgcagaccagcaacgccaacgccgcccaggtctcggtggaggaaggtggcttcggc
caccacagccagaactactgctaccaggtctgcctgaccccggagtcggccaagacggac
ctcatgttcctgaagccctgcagcccgtccaggagcacggacgctgagcacaactcctgt
ggcgctatcatcgctggctacacggaccagcagcccgacatcatttccaatgggagtata
ttatccaacgagattaaacaccagcggacggaactcagctttctagtggacaggccccgt
cgagttaacagttcggctttccaggaggcggatatagtgagttcgaaggacagtggccac
ggggacagcgaacaaggggacagtgatcacgatgctacgaaccgagctcagaactctgga
gctgacctcttttccaattgcacagaagagtgtaaagcactgggacactcagatcgttgt
tggatgcccacatttgtacccacggatggccgtcaaggacctgattaccgcagcaatctg
catgttcctggcatggactctgtgcctgacaccgaggtctatgaagctccagagcagaca
ggagagaaatccttctctacatttggaaaagaaaagtcacatccatctaatttagaaaag
aaagaatatgatgcacttctgcccaacacacgtgcgccttacaagccgccatatttaaca
cggaagagaatttgctag
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