KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122539445
Entry
122539445         CDS       T08871                                 
Symbol
helq
Name
(RefSeq) helicase POLQ-like isoform X1
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpla03400]
    122539445 (helq)
Enzymes [BR:cpla01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     122539445 (helq)
DNA repair and recombination proteins [BR:cpla03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    122539445 (helq)
SSDB
Motif
Pfam: POLQ_helical DEAD HTH_61 Helicase_C ResIII HHH_5 DUF4332 DNA_pol_lambd_f DGKD_4H TetR_C_41
Other DBs
NCBI-GeneID: 122539445
NCBI-ProteinID: XP_043530224
LinkDB
Position
32:26845549..26898934
AA seq 1088 aa
MDQRQDTKRKRAREKIYKRPSPSKKKNTNCMSLPEMIVKGEEEIHPETSLNKDYMEQLDS
QEDLFGDYDSFADDSGFLAQLEDVGRSQAESGKEDRKDTAAEFLMTYQNLNLLNYLQNDK
NNMRKHPAKNVPFATGEAVKDSLIGQKSGQNSNAASEQICIEGFSVMHPRSPDETDELPS
SQLALSDQFNSPLRKYETKELQSETNRVLNCCLTDPPDVPSVLENETLNLNIVQNQSRTT
NSGTSRRMSLKDQMKNAMAGNAMAPTSKASRSKKMKEIALSEEINVAMKTIEATSGADIG
PFYGLPSKVKDLIFQFKGIKELYEWQHTCLTLESVQSRKNLIYSLPTSGGKTLVAEILIM
QELLCRKNDALFILPYVAIVQEKVRGLSAFGIEFNFSVEEYAGSKGKFPPIKRRQKKSLY
IATIEKAHSLVNALIETERITSLGLIVVDELHMLGEGSRGAVLEMTLSKILYTNKTSQII
GMSATLNNVSDLQHFLKAEHFASNFRPVQLKEYVKICDKIYEVDNKSEDYFTFSRILSYK
YSSNMEKIDPDHLIALVTEVIPNYSCLVFCPTKKNCENVSKMLCKYLNKSFITIKEKEKC
AVIQELKNIGNGMICPILRNTVPYGLAYHHSGLTNDERKLIEDAYTAGILCLLACTSTLA
AGVNLPARRVILRSPYVARDFLKRSQYKQMIGRAGRAGMDKEGESILIAQENDKKLVSNL
ISKPLEGCYSNLIYDNEKGIKDLLLSLIGLKVTQTLHQIVGFMAGTLLGVQQQQFFKEKS
FLEVIEQALESLMEKGLIKDKISSCNNEGKMYHKLEVTKLGHATFKGSIDLAYCDSLNMD
LKKGLEGLVLGNYLHLIYLITPYDIVSQCIPDWMIYFRQFHQLDAVEQKVFATVGVPESF
LTKKASCQTVKKTVDDFVAARFYLSLVLYSLFKEMNTWAVAQKFNMSRGFLQNLLNSAAT
FSSSVQHFCEELEEFWAYHALFKDLTHKLSYCVKPELVPLMEVSGVQEARARQLYNAGYK
SLTYLANANPEVLVKTIEHMSKRQANQIVSSAKMLLNEKAEALQEEVEELLRLPIDLPLQ
TESTVTAR
NT seq 3267 nt   +upstreamnt  +downstreamnt
atggaccagaggcaggatacaaaacggaaacgagctagggagaaaatttacaaaagacca
tcaccaagcaagaaaaagaacactaactgcatgagtcttcctgaaatgattgtgaaggga
gaggaagagatacatcctgaaacatcactgaacaaggattacatggagcagttggacagt
caggaagacctgtttggggattatgatagctttgcagatgacagtggctttttggcacaa
cttgaagatgtgggtagaagccaagcagaaagtggaaaggaagacaggaaggatactgct
gcagaatttctgatgacctatcagaatctcaacttgcttaattatttgcaaaatgataaa
aacaatatgcgcaagcatcctgcaaagaatgtgccctttgctactggtgaggcagttaaa
gactccttaattggtcagaaaagtggtcagaacagtaatgctgcaagtgagcagatttgt
attgaaggcttctctgtaatgcatcctcgaagcccagatgaaaccgatgagttaccaagc
tctcaacttgcattatcggatcaatttaactcaccactgaggaagtatgaaaccaaagag
ttacaatcagaaacaaatagagtattgaactgttgtctcactgacccccctgatgttcct
tcagttttggagaatgaaacattaaatttgaacatagtacaaaaccaatcaaggactaca
aattctgggacaagtagacggatgagcctaaaggatcagatgaaaaatgcaatggctgga
aatgctatggcacccacatccaaggcatccaggagtaaaaaaatgaaggagattgctctt
tctgaggaaataaatgttgctatgaaaaccattgaagccacttcaggggctgatatagga
cctttttatgggcttccaagcaaagtcaaggatttgattttccagttcaaaggcatcaaa
gaactgtacgagtggcaacatacttgcttgacattagaatctgtgcagtcaagaaaaaat
ctaatctactccctaccaacaagtggtggaaagacacttgttgctgagattttgattatg
caggaactactgtgtaggaagaatgatgctctgttcattttgccatatgtggctattgtc
caggaaaaggtgcgaggtctttcagcttttggaatagaatttaatttctcggtggaagaa
tatgccggaagtaaaggcaaattccctccaatcaagcgtagacagaagaaatctctgtac
attgccaccattgagaaggcacatagtttggtcaatgccttaatagaaacggagagaatt
actagtttaggacttattgtagtagatgagctgcacatgcttggtgaaggaagtcgtgga
gccgtactagaaatgacattgtctaaaattctctacacaaacaaaacatcgcaaatcatt
ggaatgagtgcaaccctgaataatgtgagtgatttgcagcactttttgaaggcagaacat
ttcgccagtaactttcgacctgttcaactaaaagagtacgtcaaaatttgtgataaaatt
tacgaggtggacaacaaatcagaagactatttcacgttttctcgcatattaagttacaag
tattcaagtaatatggagaagattgatccagatcacttaattgcactggtgactgaagtt
attccgaattattcctgtcttgtgttctgtcccaccaaaaagaattgtgaaaatgtgagc
aagatgctctgcaagtatttaaacaaatcattcataaccataaaggagaaagaaaagtgt
gctgttattcaagaattgaaaaacattggaaatggtatgatatgtcccattttacgtaac
actgtgccatatggattagcataccatcacagtggactaacaaatgatgaacgaaaactt
atagaggatgcatatactgcaggaatactttgcttgcttgcttgtacatcgacacttgct
gctggtgttaaccttccagctcggagggttattctgagatcaccttatgttgccagagat
ttcttaaaaagaagtcagtacaaacagatgattggcagagctggccgagctggtatggat
aaagagggagagagtattctgatagcacaagaaaatgacaaaaagctggtatcaaattta
ataagtaaacctctggaaggttgctatagcaatctcatatatgacaatgaaaaaggaatt
aaagatcttctgctatccttgattgggctaaaggttacccagacacttcatcaaattgtt
gggtttatggctggcactcttcttggtgtgcagcagcaacagttcttcaaagagaaaagc
tttttggaagtaatagaacaagcattggaatctttgatggagaaaggtttaattaaggac
aaaatatcaagttgtaacaatgagggaaaaatgtaccacaagctggaagtcacaaagctg
ggtcatgctacttttaaaggatcaatagacttggcttactgtgattctttgaatatggac
ttgaagaaaggtttggagggtttggtccttggcaactatcttcatctgatctacctgata
acaccatatgatatagtttcccagtgcattccagattggatgatctactttagacagttt
catcagttagatgcagttgaacagaaggtatttgcgacagtgggtgtaccagagagtttc
ctgacaaaaaaagcatcttgccaaactgtaaagaagactgtagatgactttgttgcagcc
cgattctacctctccttggtgttatattcccttttcaaagagatgaacacttgggctgtg
gcgcagaagttcaatatgtctcggggctttttgcagaatttgttgaattcagcagcaact
ttctcctctagtgtgcagcatttctgtgaggaattagaggaattctgggcatatcatgct
ctctttaaagatctcactcataaactgtcatactgtgtgaaaccagaacttgtccctctt
atggaagtatcgggtgtccaagaggctcgtgctcgtcagttgtataatgctggttataaa
tctttgacttatctcgctaatgcaaatcctgaagtgttagtcaagacaattgagcatatg
tccaaacgccaggctaatcagattgtttcttctgctaaaatgctgctaaatgaaaaagct
gaagctttacaagaagaagtggaagaactgttgagactgcccattgacttaccactacag
actgaatctactgtgactgctcgttga

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