Chiloscyllium plagiosum (whitespotted bambooshark): 122539466
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Entry
122539466 CDS
T08871
Symbol
lef1
Name
(RefSeq) lymphoid enhancer-binding factor 1 isoform X1
KO
K04492
lymphoid enhancer-binding factor 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04310
Wnt signaling pathway
cpla04520
Adherens junction
cpla04916
Melanogenesis
cpla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
122539466 (lef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
122539466 (lef1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
122539466 (lef1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122539466 (lef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122539466 (lef1)
Transcription factors [BR:
cpla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
122539466 (lef1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
122539466
NCBI-ProteinID:
XP_043530262
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All DBs
Position
32:30010659..30161885
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AA seq
431 aa
AA seq
DB search
MPQLNSGGDPELGANDEMISFKDEGEQDDKILAEISATEERDLADLKSSLVNETETNAGS
DSSNSGGSNPAEREVGRRPQVNEEPFRDKARTSIEEVGKRQDTAIFKGPAYCPYQPGYVM
VPNMNNDPYLNNGSLSPPAPRTSNKVPVVQPCHAVHPLTPLITYSDEHFAPGSHPTQIPT
DINSKRGMQRHPAGPDIPSFYPLSPGAVGQLTPPLNWFSHPMVHGNPNPPTTGIPHPAIV
NHQIKQEPIHNEIEHMDIKPHHETRKEQEAKKPHIKKPLNAFMLYMKEMRANVVAECTLK
ESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYKGKKKKRKREKM
QETTSGHSPKLLLLQPGEQDGLGHRLLRDCQQRCSIISQQKAQAKWAEPDDVSFFPPPPE
MERLTSKWCSI
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagctcaacagcggtggcgacccggagctcggagccaacgacgagatgatttcg
ttcaaggacgaaggggagcaggatgataaaatcctggcggagatcagcgccaccgaggag
agggatctggccgacctgaagtcctcgctggtgaacgagacggagactaacgcgggcagc
gacagcagcaatagcggcggcagtaacccggccgaacgggaggtaggcagacggccacaa
gttaacgaggagccctttcgggacaaagcgagaaccagtatcgaggaggtagggaagaga
caggatacggcgatcttcaaaggtccggcttactgcccctaccagccaggttatgtcatg
gtgcctaacatgaacaacgacccttacctgaacaacggttccctctcacctccagcgccc
agaacgtccaacaaggtgcccgtggtgcagccgtgccatgcagttcacccgctcacgccc
ctcatcacctacagcgatgagcactttgcccctggatcacaccccacacaaatccccaca
gacatcaactccaaaagaggcatgcagagacaccccgcaggtcctgatatcccctccttc
tatcccctgtctccaggtgctgttggacagctcacgccccctctcaactggttctctcat
ccaatggtccatgggaacccgaatcctcctaccactggtattccacacccagccattgtg
aaccaccaaatcaagcaagaacccattcacaacgagattgagcacatggacataaaacct
caccacgaaacaaggaaggaacaagaggccaaaaaacctcacatcaagaagcctctcaac
gcctttatgttgtacatgaaggagatgagagcaaatgtggtggcagagtgcacattgaaa
gagagtgcagctatcaatcaaatcctcggcaggaggtggcacgctttgtctcgcgaagag
caagcgaagtactatgaactggcacgcaaggagcggcaactccacatgcagctctacccc
ggctggtctgcacgagataactataagggaaagaagaagaagaggaaacgtgaaaagatg
caggaaaccacctcaggccactcaccaaagctcctactcctgcagccaggagagcaggat
gggttggggcacagactactccgcgattgtcagcagcgctgttccatcatcagccagcag
aaggcgcaagccaagtgggccgagcccgacgatgtcagttttttccctcctccaccagag
atggaacgtctcacttccaagtggtgctccatctag
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