Chiloscyllium plagiosum (whitespotted bambooshark): 122539496
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Entry
122539496 CDS
T08871
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1-like isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122539496
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122539496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
CUE
Pyr_excise
Na_Ca_ex_C
Epsilon_antitox
Motif
Other DBs
NCBI-GeneID:
122539496
NCBI-ProteinID:
XP_043530338
LinkDB
All DBs
Position
32:35059725..35181450
Genome browser
AA seq
1013 aa
AA seq
DB search
MSSFNLDRFRYEKKRGAQTNGERDLDRRRGSPRDPGFPEVGGPAVTIVPETPEGKQSNLL
SYFRRKEKGVLFLDSESETEETCKKNLSCRAVNGRPDGCIQKLNDTVDFSSGEDEQLSLK
ENGSFMDSSGSSHSVNLEDSTASRVQKLTEIFPNRTDAELLQIIESTSTLDGAVAAGLIL
FGEGATPRKRKLEMSQSSSSEESDDLPISSTKKKKPNRLASQDLGEDFEKKESILRKLHN
KFPDLDKEELREVLEEHDWSFWEALEALQAFTNQDLEDEVPCIPEPKCINGKGATSHFKV
QPKEIPAMQLKLSGAAKDQDGKSKNHDKGLKDGRSVQKECSDSEDVESILSGGESSLDED
YSSADEEMEDEYRTKIVSFLQDGTVDELSLIPQCSLRKAEKIIELRPFNNWESLFKKFNR
SHGLSEDLIWNCKIVIKEREVVLKLMNRCAEISQRLEEQVTEITEDGGSHQTIEQPVILS
ESLELKPYQLVGLNWLVLLNKHRVNGILADEMGLGKTVQAISFLAYLYQEGDKGPHLIIV
PASTLDNWIRELKQWCPDLKVLLYYGSLEDRKVLRSDILHKFVDFSVIVTTYSCSISNAD
DRSLFRRLKLHYAVFDEGHMLKNMSSIRYQHLMTFNAEHRLLLTGTPLQNNLLELMSLLN
FVMPNMFSSSTSEIRRMFSSKSKTLEQQSSFEKGRIAHAKKIMKPFILRRVKSEVLQQLP
PKQDRVEICSMSDKQEQAYAALYKKLKKSINSNEKNELCNVMMQLRKMANHPLLHRQYYT
VEKLRKMAKLMKKEPTHRDANPDLIFEDMEAMTDFELHHLCQEYSSIRSFQLEMELLLDS
GKFQILENILTELKEEGSRVVLFSQFTMMLDILEVFLRHHKHRYLRLDGKTQISDRIHLI
DQFNTDMDIFVFLLSTKAGGLGINLTSANIVILHDIDCNPYNDKQAEDRCHRVGQKKVVH
VVKLISKGTIEESMLKIGEHKLKLEQDMTSTETGGEGNIPLNIATLLKTSLGL
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgagctccttcaacctcgaccgtttccgttatgaaaagaaacgcggcgctcagacgaac
ggcgagcgggacctagaccggcggcgtggctccccgcgggatccaggcttcccggaggtg
ggaggcccggcagtgaccatcgtaccagagactccagaaggaaaacagtcgaacctttta
tcatattttaggagaaaagaaaagggagtcctttttctcgactctgaatctgaaactgag
gaaacatgcaagaaaaatttatcatgtcgggcagtgaatggaaggccagatggatgcatt
caaaaattaaatgacactgttgacttttcatctggtgaggatgaacagctttccctgaaa
gaaaatgggtcttttatggacagcagtggctcatctcattctgttaatttggaggattcg
actgcttccagagtacaaaaactgacagaaatatttccaaatcgaacagatgctgaacta
ttgcagataattgaatcgacaagtacactggatggagcagtagctgcaggattaatcttg
tttggagaaggagctactcctcggaaaaggaaacttgaaatgtcccaaagcagcagctct
gaagaaagtgatgatctccctatttcctctaccaaaaagaagaaacctaatcgtcttgca
tcacaagatttaggagaagattttgaaaaaaaagaatctattctgagaaagcttcacaat
aaatttccagatttagacaaagaggagctccgagaagtcctggaagaacatgactggtcc
ttttgggaggccttggaagctttgcaggcatttaccaatcaagatttagaagatgaagtg
ccttgtataccagagcctaaatgcataaatggaaaaggtgccacttcacattttaaagtg
caaccaaaagagataccagcaatgcaattgaaattatctggagcagctaaagatcaggat
ggtaaaagcaaaaaccatgacaaaggactaaaagatggtagaagcgttcaaaaggagtgt
agcgattctgaagatgtggaatccattctttctggtggtgagagctcacttgatgaggac
tacagtagtgcagatgaagagatggaagatgaatacaggactaaaatagtcagcttcttg
caggatggtacagtggatgaactttctcttatacctcaatgctctttgcgaaaggctgag
aagattatagaactccggccctttaacaattgggaatcactgtttaaaaagtttaatcgg
tcacatggtttgtctgaagacttgatatggaattgcaaaatagtaatcaaggaacgggaa
gtagttcttaaacttatgaacagatgtgccgaaatctcccaaagattagaagaacaagtg
actgaaataacagaagatggtggaagtcaccagaccattgagcagcctgtcattctgagc
gaaagcttggaacttaaaccatatcaactagttggactaaattggttggttttgctgaat
aaacatcgggtgaatggtatattagcagatgaaatgggactggggaaaactgtacaagct
atatcattccttgcctacctttaccaagaaggagataaaggaccacatctcatcattgta
cctgcttctaccctagacaactggatccgggaacttaaacagtggtgtcctgatctcaaa
gtccttctttattatggatctttagaagaccggaaagtcctcagatctgatatacttcac
aagtttgtggatttcagtgtaattgtgactacgtatagctgctcaataagtaatgcagat
gaccgcagtctctttcgacgtttaaagctccattatgcagtttttgatgaaggacacatg
ctgaaaaatatgagttccattcgatatcagcatcttatgacatttaatgctgaacatcgc
ttgctgttgactgggactccactgcagaataatctcctagaattgatgtctctgttgaat
tttgtcatgccaaatatgttcagcagcagtactagtgagattcgcaggatgttttcctcg
aaaagtaaaaccttggaacagcaaagtagttttgaaaaagggagaattgctcatgccaag
aaaatcatgaagccatttattctgaggagagtcaagagtgaggtcttacaacagcttcca
cccaagcaagaccgtgtagaaatatgttcaatgtctgataaacaagaacaggcgtacgct
gctctctacaagaagttgaagaaatcaatcaacagtaatgaaaagaacgagttatgtaat
gtgatgatgcaacttcgtaagatggccaatcacccgctacttcataggcaatattacact
gtggaaaagttgaggaaaatggctaagttgatgaaaaaggagcccactcacagagatgcc
aaccctgatctcatctttgaagacatggaggcgatgacggattttgaattgcaccatttg
tgtcaagaatacagtagcataagaagctttcagttagaaatggagctgcttttggattct
gggaagttccaaattctggagaatatacttacagaacttaaagaggagggttccagagtt
gtgctgtttagtcagtttactatgatgttggacattctggaagtattcttgagacaccat
aaacaccgctatcttcgactggatggcaaaacccaaatctctgatagaatccacttgatt
gatcagtttaatacagatatggatatttttgttttcctgttatcaactaaagctggagga
ctgggtataaacctaacctcagccaacattgtcatccttcatgatatcgactgcaacccc
tacaatgataagcaagcagaagatcgatgtcacagagtaggacagaaaaaggtagtgcat
gttgtaaaactgatcagcaaagggactattgaagaatccatgcttaaaattggtgaacat
aaattgaaactagaacaggatatgacttcaacagaaacaggaggcgaggggaacattcca
cttaatatagcaactttattgaagacttcattgggattatag
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