Chiloscyllium plagiosum (whitespotted bambooshark): 122539548
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Entry
122539548 CDS
T08871
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04010
MAPK signaling pathway
cpla04210
Apoptosis
cpla04218
Cellular senescence
cpla04620
Toll-like receptor signaling pathway
cpla04621
NOD-like receptor signaling pathway
cpla04622
RIG-I-like receptor signaling pathway
cpla04623
Cytosolic DNA-sensing pathway
cpla04625
C-type lectin receptor signaling pathway
cpla04920
Adipocytokine signaling pathway
cpla05132
Salmonella infection
cpla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122539548
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
122539548
04218 Cellular senescence
122539548
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
122539548
04621 NOD-like receptor signaling pathway
122539548
04622 RIG-I-like receptor signaling pathway
122539548
04623 Cytosolic DNA-sensing pathway
122539548
04625 C-type lectin receptor signaling pathway
122539548
09152 Endocrine system
04920 Adipocytokine signaling pathway
122539548
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122539548
09171 Infectious disease: bacterial
05132 Salmonella infection
122539548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122539548
Transcription factors [BR:
cpla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
122539548
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_5
Ank_4
Death
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
122539548
NCBI-ProteinID:
XP_043530455
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All DBs
Position
32:40907348..41003973
Genome browser
AA seq
949 aa
AA seq
DB search
MMAEEDTYRLGVPDIYGIDDYNALELPNAMFTSPMGPTDSPLQTPDGPYLQILEQPKQRG
FRFRYGCEGPSHGGLPGASSEKNKKSYPTVKICNYVGQAKIVVQLVTYGKDSVHLHAHSL
VGKQCEKGICLVQVGPKEMISTFPNLGILHVTKKNVASTLEQRMTQAYVMGYNNGVVIHP
ELNHRHSEGYGQRELTEREKELIHQASIQQAKEMDLSVVRLMFTALLPDSSCRFTRKLEP
VISDPIYDSKAPNASNLRIVRMDKTAGCVVGGDEVYLLCDKVQKDDIQVRFYEEDENGGI
WEAFGDFGPTDVHRQFAIVFRTPKYRDVDISKPASVFVQLRRKSDNETSEPKPFTYYPLI
KDKEEVQRKRLKLLPNFSDHFGGGAGSGGGGVYGGGSGAGGGSNYFAGFQGYSNYSSYTY
TPGTTNSSAGMKHAASCPTENCDCVKTAVSSLPSDQPTAQAAAKSTGTLSNSDSADSTVT
VEEAEANQCFLEKALSLAERHASALLDYSVTGDTKMLLAVQRHLTAVQDQNGDTALHLAI
IHFQSGVVQHLLQVIISLPGQDIINMRNDLYQTPLHLAVVTRQAKVVELLLQAGADMGLL
DCHGNSVLHLAAQQGDVKVLNVLLSKKNKTLLELLHLPNNAGFNVVHLAVLANSLSSLRQ
LIAADIDVDSLEQQAGRTALHLAVEQENISLAGCLLLEGSAEVDATTFDGSTALHVAAGR
GYTKLCALLIAAGADPHIENHEPLNDKTDESVEADDDDEGIFHGTTPLDMAASEEVYDIL
NGKPYQPKPAPVAPFPQGDLGQLNIEARLELCKLLEVPEPNLNWMALAQKLGLGILINAF
KLSHSPAKTLLDNYEVCGGTILEILETLKSMGYSKAIDVLHKAIANSASAEPGRTSNSPT
PTEQPNIVQIDTKSQQCDSVCDSGVETSFRRLSHMSAECYSNNQTSFEL
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgaagaggatacctatcgtcttggagtccctgatatttatggtatcgatgat
tataatgctttagaattacccaacgccatgtttacttcgccaatgggtcccacagattct
ccactacagacacctgatggaccatacctacagattctagaacaacccaaacagagggga
tttcgtttccgttatggatgcgagggaccatcccatggaggattacctggtgcatcgagt
gagaaaaataagaaatcctaccctactgtgaagatatgcaactacgttggacaggcaaag
attgttgttcagttggtgacctatgggaaggatagtgtgcatctccatgctcacagtctc
gttggcaaacagtgtgaaaaaggaatatgtttagttcaagtgggtccaaaggaaatgatt
tcaacatttccgaacctcggtattctacatgtgacaaagaagaatgttgccagtacactc
gaacagagaatgacacaggcttatgtgatgggttataataatggagttgtaattcaccca
gaattaaaccatcgacacagcgagggttacggtcaaagggaactcacagaacgtgaaaag
gagttaatccatcaggcttccattcagcaagcaaaagaaatggacctgagtgtcgtgcgt
cttatgtttacagccctgcttccagacagcagctgtcgatttacacgtaaattggaacct
gttatttctgatcccatctacgacagcaaggcaccaaatgcatcaaatttgaggattgtc
agaatggataagactgctggatgtgtagttggaggagatgaggtttacctactgtgtgat
aaagttcaaaaagatgatatccaggttcgattctatgaagaggatgaaaatggtggaatt
tgggaagcattcggagattttggcccaacagatgttcaccggcagtttgctatagttttt
agaacgccaaaataccgggacgtggacatttccaaacctgcgtctgtgtttgtacagctt
cgtagaaaatctgacaatgaaacaagtgaaccaaagccattcacctactacccactgatt
aaagacaaggaggaggtacaaaggaaacgattgaaacttttaccaaatttctctgaccat
tttggaggtggagcaggttcaggaggaggtggagtttatggaggaggcagtggagcagga
gggggttccaattactttgctggatttcaaggatattccaactacagtagttacacatac
acgcctgggacaacaaactccagtgctggaatgaaacacgctgccagttgcccgactgag
aattgcgattgtgtaaaaacagctgtgagctccttacccagtgaccagccaacagcccag
gctgcagctaaatccaccgggaccctcagtaactcagattctgcagattcaacagttact
gtcgaagaagctgaagcaaatcagtgcttcctcgaaaaagccctaagccttgctgaaaga
catgccagtgccttgttggattattctgtaactggtgataccaagatgctgcttgctgtt
cagcgccaccttactgcagttcaggaccaaaatggagatacagctttacatcttgcaatt
attcatttccaatctggagtggttcaacatcttttgcaagttataatcagccttcccgga
caagatatcatcaacatgaggaacgatctttatcagacaccattgcacctggcagttgtt
acaagacaggccaaggtggtggagttattgcttcaagctggagctgacatgggtctcctg
gattgccatgggaactctgttctacacctggcagcacagcagggagatgtgaaggtgctc
aatgtcctcctaagcaaaaagaacaagactctactagaactcctccatttgccaaataat
gcaggtttcaatgttgtccatctggctgtgttagcgaatagtctgtcgtcactgaggcag
ctgattgcagccgatattgatgtggattctctggagcagcaggcaggtcgcactgcactc
catctcgcagtcgaacaggaaaacatctccttggctggctgtctcctcctggagggcagt
gcagaagttgatgccaccacatttgatgggtctacagcacttcacgtagcagcaggaaga
ggctataccaaactctgtgccttactaatagcagcaggtgcagatccacacatcgagaat
catgagccactaaatgacaaaactgatgaatctgttgaagctgatgatgatgatgaagga
atctttcatggtaccacaccgttagacatggcagcctcagaagaggtctatgatatccta
aatggtaaaccataccaaccgaaacctgcaccagtagctcctttcccacaaggtgactta
ggtcagttgaatatagaagcaaggctggagctgtgtaaactgttggaggtacctgaaccc
aatctgaactggatggctctcgctcagaaactgggtcttggaattttaatcaatgccttt
aaactcagccattccccagcaaaaacactgctggataactatgaggtatgtggtggcact
atcctggagattctggaaacgctgaagtctatgggctacagcaaagcaattgatgttctt
cacaaagcaatagctaactcagcaagtgcagaaccaggcagaacaagtaactcaccaaca
cccactgaacaacccaacattgttcagattgatacaaaatcccagcagtgtgacagtgtg
tgtgacagcggagtggagacgtcatttaggagactaagccacatgtcagcagaatgttac
agcaacaaccagacttcttttgaattgtga
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