Chiloscyllium plagiosum (whitespotted bambooshark): 122539569
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Entry
122539569 CDS
T08871
Name
(RefSeq) cartilage intermediate layer protein 1 isoform X1
KO
K24436
cartilage intermediate layer protein
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cpla04990
]
122539569
Domain-containing proteins not elsewhere classified [BR:
cpla04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
122539569
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
I-set
Ig_2
TSP_1
TSP1_spondin
ig
CarboxypepD_reg
CarbopepD_reg_2
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
122539569
NCBI-ProteinID:
XP_043530490
LinkDB
All DBs
Position
32:42876082..42947765
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AA seq
1183 aa
AA seq
DB search
MVSNWTRIFLITGMIWNLSQGHWEWTSWFNVDHPGGSGDYEQLVAIQRYYGERICLRPVA
VEARTIHGVPATMTGEVVHLNPQLGFWCLNKEQLSGKPCSNYAVRFRCPKRSTVSQSFWS
QWSDWGSCTAACEETGVQLRHRTCSTDNQNKEQLCPGPVEEGRICKGTACITTPATSSKP
LKIPRESKEEQQPGCKLRCTMGRVNAECSRCMCEEHLLHGSVHLQDGAPASQATVQLWGD
SDQILTVCDEKGKFRIPGLCPDGKTVLKIMKSHYGTVLHTLSINNSKISTIEVKLKRSEK
PYIRKHPSNKVRHEGQSVTFCCKVQCNPPPDKYFWYHNGSLLDVKTHGYHSSLVLRDLQP
QQAGQYLCQARNIAGSIKSKPASLTVIALGAPSCNPKPKTHLIQLPYDCYQNLTQSFYYN
VGKCSVTTCSGEHEPEPRCKDTTAYCCGAVKLVERKISCTNYMLPIKVVSRCGCQKCVET
RAIVRGRALAADNGEAMRFGLIFMSGKKISMTGFRGTFSIQVPADIDRLVLTFVDRYGKF
VNTTKILPFNKKGSSVYHEIKLLRKKPAVTLDCSVSNTISLGAIENQSPIAELEIPPNSF
YRQNGDIYRGLVKASVTFLDPRDISLASAAQSDLNFINEEGDVLPLRTYGMFSLDFRDEA
AKESLNAGQVKVFLDSAQVKMPEHLEKMKLWSMNPETGFWEEEGDFTFISIRRGKREDRK
FLVGNMEIRERRLFNLDVPESRRCYVKVRTFRSDRFMPSNQIEGVVVSLINVEPMSGFSS
NPRAWGRFDSVITGPNGACLPAFCDDQQPDAYSAYVMATLAGEELEAVASFPDMNSNTIG
VQQSYFKKLQYRRSDHEDANVKKTAFKINVAKPTPTVSDEMDGPIYRYENFKECEEASFS
AGHFRFYRVEGDSYAFNTVPFDDDDPMSWTEDYLAWWPRPLEFRACYIKVKLHSPQEITV
RSRNTGGTHPQTVGKIYGIRDMRSTRALDHLGISAVCLEFKCSGMLYDQERIDRTLVKII
PQGKCHRESVNNMLQEYLVNHLPLAVNNDSSEFTMLAPLDPLGHNYGIYTVTDQDPRTAK
EIALGRCFHGSSDSVSRVMKSNVGVALTFNCDEKQEHRQNIFQSLQNSPKFPEVNNMSMG
RRKRGKGQRDHLFGLRQFNKYRKQRIAPRRKQWQRNLQFSARD
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggtttcaaactggaccagaatctttctcataactgggatgatttggaatttatcacaa
ggtcattgggaatggacatcctggtttaatgttgatcatcctggtgggagtggagactat
gaacagcttgttgcaatccaacgttattatggggaaagaatatgtctgagaccagttgct
gttgaagctcgcactatacatggggtccctgccacaatgacaggagaggttgtgcacctc
aaccctcagcttggtttctggtgtctcaacaaggaacaactttcaggaaaaccttgttca
aattatgctgtccgattcagatgtcccaaacgttcgacagtttctcagagtttctggtcc
cagtggtcagactggggctcctgcacagcagcctgtgaggagacaggagtacagttacgt
catcgcacctgctccaccgacaaccagaacaaggagcaactgtgtccaggtcctgtggag
gagggcaggatatgcaaaggcacagcttgtataacaactcctgcaacctccagcaagcca
ctaaagattccaagggaaagtaaggaggagcagcagcctggttgtaaactgagatgcaca
atgggtcgtgtaaatgcagagtgcagtcgatgtatgtgcgaagaacatctactccacggt
tctgtacatcttcaagatggcgctccagcctcccaggcaactgtccagctgtggggagac
tctgaccaaatcctgacagtctgtgatgaaaagggaaagttcaggattcctggtctttgc
cctgatggcaaaactgtgttaaaaattatgaagtcacattatggaactgtgcttcataca
ctgagcataaacaacagcaaaatatctaccattgaagtgaaactcaagagatctgagaaa
ccatatatcaggaaacatccatcaaacaaagtcagacatgagggacaaagtgtgactttc
tgctgcaaagttcagtgtaatcccccaccagacaagtacttctggtatcataatggctct
cttttagatgtgaagacacatggttatcacagttctcttgtgttaagggaccttcaacca
caacaggctggacaatatttgtgtcaagctcgtaacattgcaggctctattaaatccaag
ccagcctcgttgacagtgatagctcttggtgctccttcatgcaaccccaaacctaagacc
cacttaatacagcttccttatgactgttaccagaatctgactcagtcattttactacaat
gtgggaaaatgttctgtcacaacatgcagtggtgagcatgaaccagagccacgatgcaaa
gacacaacagcttactgctgtggggcagtgaaacttgtggaaaggaagatttcctgcacc
aactatatgcttccaatcaaggtggtcagcaggtgtggttgtcagaagtgtgttgaaacc
agggcaattgtccgtggccgtgcacttgctgctgataatggtgaagccatgcggtttgga
ctgattttcatgagtggaaagaagattagtatgactgggtttagaggaacattctccatt
caggttcctgcagacattgatcggctagtactcacctttgtagatcggtatggcaagttt
gtgaacacaacaaagattcttccctttaacaaaaaaggcagctctgtctatcatgagatt
aaacttctaaggaaaaagccagcagtgactttggattgttctgtcagcaataccatctca
ctgggagcaatcgaaaaccaaagtcccatagcggaattggagattcctcccaactccttc
tacaggcagaatggagatatttacagggggttagtcaaagccagtgtaacattcttagat
ccaagggatatctcgttagcttcagcagcccagagtgatctgaatttcattaatgaagaa
ggtgatgttcttcctttgaggacatatggcatgttttctcttgactttagagatgaagca
gcaaaggaaagcctcaatgcaggacaagtgaaggtttttctggactctgcacaggtgaaa
atgccagaacacttggagaaaatgaagctgtggtcaatgaaccctgaaacgggcttctgg
gaagaagaaggtgattttacttttattagtattcgacgaggtaaacgagaagatagaaag
tttctggtgggcaatatggagattcgagagagaagactttttaaccttgatgtccctgaa
agcagaaggtgctatgttaaagttagaacatttcgaagtgatcgatttatgccaagcaat
cagatcgaaggagttgtggtgtcacttattaatgtggaacccatgtcaggcttttcctct
aatcccagagcttggggtcggtttgacagtgttattactggtccaaacggagcttgcttg
ccagctttctgtgatgaccagcagccagatgcttactccgcctatgtgatggcaactcta
gcgggagaagaacttgaggcagtagcatctttcccagatatgaactcaaatacaataggt
gttcagcaatcttatttcaagaagctgcagtatagaagatcagatcatgaagatgccaat
gttaaaaagacagcttttaaaataaatgtagccaaaccaacacccactgtctcagatgaa
atggatggtcctatttaccgttatgaaaattttaaagaatgtgaagaggcttcatttagt
gcaggtcatttccgcttttacagagtcgaaggagacagttatgcttttaacactgtacct
ttcgatgacgatgacccaatgagctggacagaagactaccttgcttggtggccaaggcca
ctggaattcagagcttgttatataaaggtcaaactccacagccctcaagagattactgtg
agatctcgaaacacaggagggactcatcctcagacagttggaaaaatttacggtattcgc
gatatgcgaagcactcgtgctctggaccacttgggcatctctgccgtttgcttggaattt
aagtgtagtggaatgctctatgaccaagaacgcattgaccgcacattagtgaagatcatc
cctcaaggtaaatgtcacagagaaagtgtgaacaatatgttacaggaatatctggtcaac
caccttcctcttgctgtcaacaatgactccagtgaatttaccatgttggctccactcgat
ccccttggccataactatggaatctacacagtaactgatcaggatccaaggacagccaaa
gaaatagcactggggagatgttttcatggaagttcagacagtgtatccagagtcatgaag
tctaatgttggtgtggcattgacctttaattgtgacgagaagcaggagcaccggcagaat
atattccaaagtctgcagaactctccaaaattcccagaggtgaacaacatgagcatggga
cgaagaaagagaggaaaaggacagagagatcatttatttggtcttcgtcaatttaataaa
tacagaaagcagagaatagctccacgcagaaagcaatggcagaggaacctacagttcagt
gctcgagattaa
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