Chiloscyllium plagiosum (whitespotted bambooshark): 122539571
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Entry
122539571 CDS
T08871
Symbol
spata5l1
Name
(RefSeq) spermatogenesis-associated protein 5-like protein 1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpla03009
]
122539571 (spata5l1)
Enzymes [BR:
cpla01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
122539571 (spata5l1)
Ribosome biogenesis [BR:
cpla03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
122539571 (spata5l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
RuvB_N
AAA_22
AAA_14
NACHT
AAA_33
DUF815
TIP49
bpMoxR
Rad17
AAA_7
ABC_tran
nSTAND3
Viral_helicase1
AAA_28
TsaE
IstB_IS21
nSTAND1
Motif
Other DBs
NCBI-GeneID:
122539571
NCBI-ProteinID:
XP_043530494
LinkDB
All DBs
Position
32:43281651..43402835
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AA seq
759 aa
AA seq
DB search
MVALLLLPPEAGDRASQRCRLGPRALAALGLGLGSPLRVSLPGGSALCSAWPRPDQAEGF
LQLDTTCVSPGLLERPGSGRGKRLSLGHLEPLSSVKLRRVRVRTVQAPGPWGEVGPAVPS
DAELLLLKELLRGLFLRPAFVVTAEAAAWPGLFLVEVAAVEPELCPGGAGLMGPGTQLEV
AERLNLDQFRARGRGLGLGGLHHSAAPLREMLNLPLRFPQSLRRLGLSCPQGLLLLGPPG
VGKTALLRAVAQDLAAPLVLASPATLRGSRPGDSEQRLRRLFAQAQAKAKAKPCILFIDD
IESLFPRRAAAGSRPEDRLVAQLLTLMDGLKPRSRLVVVAASNCPEALDPALRRPGRFDR
EILIGVPTMSQRQSILEVVTSSMPLRADVDLTWLAEATSGYVGADLTALCREAALQLVRR
SSQDTVNKEITFADFREAIKVVQPSCLRSSVGLTDFKPVHWDQIGGLDQVKLKLKQSIQW
PVLYPQAFERMGVTPTRGILLYGPPGCAKTTLVKAAASSYRCSFLSISGADLFSPFVGDS
EKILAQVFQQARAAAPSILFLDEIDSIFGSRSFDGANGRSVKERVLSVLLNEMDGIGQPL
IGRRISERNILASEANQVEPTKKFQEVCNKNVIVVAATNRPDLLDDALLRPGRFDQIIFV
PSPDEKTRLSILRICTSKTPLDDVSLEGLAAETAGFTGADIQNLCKEAALLALQENGLDV
AAVKHEHFLKCLQSLKPSLSGQQLHFYHHLFSTVTQAIT
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggtcgctctgctcctgctccctccggaagctggggatcgggcttcccagcgctgccgc
ctcgggccccgggccttggctgctctgggccttggcctgggctccccgctgcgggtctcg
ttaccgggtggctccgctctgtgttccgcctggccgcggccagaccaggccgagggattc
ttgcagctcgacaccacgtgcgtgagtccggggctgctggagagaccgggctcgggccgg
ggcaagaggctgagcctcgggcatttagagcctctgtcctccgttaaactgaggcgggtc
cgggtgcggactgtgcaggcgcctgggccgtggggagaggtcgggcctgctgttccatcg
gacgccgagctgttgttgctgaaggagctgctcagggggcttttcctccgcccggcgttt
gtggtgacggcggaggccgcggcctggcctgggctgttcttggtggaagtggccgcagtg
gagccggagctgtgtccaggtggagccgggctcatgggccctgggacccagctggaggtg
gcggagcggctgaacctggatcagtttcgagcccgaggtcggggcctgggcctgggcgga
ctgcaccactccgctgccccgctccgagagatgctgaacctcccgcttcgcttcccgcag
tccctgcgtcgcctcgggctgtcgtgtccacaggggttactgctgcttgggcccccgggg
gtggggaagacggcgctgctccgggccgtggcccaggacttggccgcgccgctggtcctc
gcatctcccgccacactccggggctcccggccgggcgacagcgagcagaggctgcgccgc
ctgttcgcccaggcccaggccaaggccaaggccaagccctgcatcctcttcatcgacgac
attgagtcattgttcccccggagggcagcggcggggagccggcctgaggaccgtctggta
gcccagctcctcaccctgatggacggcctgaaacctcgcagtcgcctagtggtggtagcg
gccagcaactgccctgaggccttggaccctgccttgaggaggcccggccgctttgaccga
gagatcttaattggggttccaacgatgtcgcagcgccaatccattctggaagtagtaacc
tcatcaatgcctctgagggctgatgttgatctgacctggctggcagaagctacaagtggt
tatgtcggtgctgacctaacagctctctgccgagaggctgctctgcagctcgtgaggcgc
agctcccaggacacagtgaacaaggaaatcacctttgcagacttcagagaagcaataaag
gttgtgcagccttcctgtctgagaagcagcgtcgggctaactgacttcaaacctgtccac
tgggatcaaattggtggcctggatcaagtgaaattgaaattgaaacagagtattcagtgg
ccagtgctgtacccgcaggcatttgagaggatgggagtgacccccactcgtgggattctg
ctgtatggacccccaggatgtgcaaaaaccacgttggtgaaagctgcagcctccagctac
cgctgttctttcctgtcgatcagtggggcagatctcttttcaccatttgtaggtgattct
gaaaagattttggctcaggtttttcagcaagctcgagctgcagctccatccatcctgttt
ctggatgaaattgattccatctttggatcgcgttcatttgatggagcaaatggccgttct
gttaaagagcgggtactctctgttcttcttaatgagatggatggaattggccagccattg
attgggaggagaatctcagagaggaacatacttgcatctgaagcaaatcaagttgaaccg
acaaaaaagtttcaggaggtttgtaacaaaaatgtgatcgtggttgcagctacaaatcgg
ccagacctattagatgatgctttgttgcgacctggaagatttgaccaaatcatctttgtt
ccatctccagatgaaaaaaccagactttccatactgaggatctgtacttccaaaactcca
ctggatgatgtgtctttggagggactggcagctgagacagctgggtttactggagcagat
atacaaaatttatgcaaagaggctgcactattggctcttcaagaaaatggactggatgtt
gcagctgtgaaacatgagcattttctcaaatgtcttcagagtctaaaaccatctttgagt
ggtcaacagttgcatttctatcatcatttattctctacagtgacccaggcgataacatga
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