Chiloscyllium plagiosum (whitespotted bambooshark): 122539596
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Entry
122539596 CDS
T08871
Symbol
slc24a1
Name
(RefSeq) sodium/potassium/calcium exchanger 1 isoform X1
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
122539596 (slc24a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpla02000
]
122539596 (slc24a1)
Transporters [BR:
cpla02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
122539596 (slc24a1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
122539596
NCBI-ProteinID:
XP_043530535
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Position
32:44527889..44572502
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AA seq
820 aa
AA seq
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MYLSRRRRRLCSHRVLFLVSGLIICSVHQLLTGNLGFSAPRTAPGGAAGSLAPQSRRLLQ
TPGGSSTAPSPAPDTPIPGDPTPGTPSPRDPTPGAPSPWAPTPGAPSPWAPIPWSSSPGS
RTPGPGLSASSGRPGDRDTGVAASGSPRLKGCIRVGDEIIPAPTATPPGPGSSPEAGEQE
PPLGHTKGEYPVDVFSVEQRRHGWVVLHATGMVYMFIALALVCDEFFVPSLGEIIEKLEI
SDDVAGATFMAAGGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGMCAIFSREI
LHLTWWPLFRDVSFYILDLIMLIIFFLDNLIEWWESLLLLSAYISYVCFMKFNVKMERWF
KGYVVNNSNVVKVMSMINPPKGKGSLPEKQSLPNSPAESNTTQHLKQVQNIDSESKQEEK
EENNRLKPKAILTRGSSTPSLHNSMLRNTIFQLMINTLDPLAEVKFKQKAEIMNSMAKGK
GSSKDQRGNNMKGGETDEKLKEEMQEEKKEEKEEEEKDETDLPNVVNVEVTPPTDPPSPS
SPTEGAEDEENPIKDQETNDQGEDAGNNGGDENDSSDGDSEDSGDDDCGDDGDDTDEDSD
EEDNEKEEKEATNDEEPLSLEWPDTRRKQVTYLCLLPIVFPLWLTVPDVRNAASKKYFIG
TFFGSILWIGAFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLG
DMAVSSSVGSNIFDITVGLPVPWLLYAAFHRFNAVPVSSNGLFCAIVLLFLMLLFVIISI
GVSKWKMNKFLGFTMFGLYFTFLIISVMLEDRIIVCPVSI
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgtacctgagcaggaggaggaggaggctttgctctcaccgggttctgtttctggtttcc
gggttgatcatttgctccgtgcaccagctgctcaccggcaacttggggttttcagcaccg
cggacagctcccggtggagcagcgggcagcctggccccccagagccgcagactcctgcaa
actccaggcggcagcagcacagccccgagtcccgctccggacacccctattcccggggac
cccacacccgggaccccctctccccgggaccccacacccggggccccctctccctgggcc
cccacacccggggccccctctccctgggcccccatcccctggtcctcctcacccggcagc
cgcactcccggccccgggctcagcgccagcagcggccggccgggagacagagacacgggg
gtagcggccagtgggagcccgcggttaaaggggtgtattcgggtgggggatgagatcatt
cccgcccccactgcgacccccccgggcccagggagtagccccgaagccggggagcaggag
ccccctctcggccacaccaagggcgagtacccggtggatgtgttcagtgtggagcagcgc
cggcacggctgggtggtcttgcacgccactggcatggtctacatgttcatcgcgctggcc
ctggtctgcgatgaattctttgtcccatctttaggggaaattatcgagaaactggaaatc
tcggacgatgtggccggggctaccttcatggcagcgggaggctctgctcctgagctcttc
acctccctgatcggggtcttcatctcccacagtaacgtggggatcggcaccatcgtgggc
tcggccgtctttaacattctcttcgttatcggaatgtgtgcgatcttctcccgcgaaatc
ctgcacctgacctggtggcccctgtttcgggacgtgtccttctatattttggacctgatc
atgttaatcatcttcttcctggacaatctgatcgagtggtgggaaagtctcctcctgttg
tctgcgtacatcagctacgtgtgcttcatgaaattcaacgtgaaaatggagcgctggttt
aagggctatgtcgtcaacaacagtaacgtggttaaagtgatgtccatgatcaacccgccc
aagggcaaggggagcctaccggagaagcaatctctcccaaacagcccagcagagtccaac
accacccagcacctgaagcaggtacagaatattgattctgaaagcaaacaagaagaaaag
gaagaaaacaacagacttaagcccaaagcgattctaactcgaggaagtagcacaccgtca
ctacacaacagcatgctgcggaacactatcttccagctcatgatcaatacgctggacccc
ttggctgaagtgaaatttaagcagaaggctgaaataatgaacagtatggcaaagggcaag
ggaagttcaaaagatcaacgaggaaacaatatgaaaggtggagagacggatgaaaaactg
aaagaggaaatgcaagaggagaaaaaagaagagaaggaagaggaggaaaaagatgagaca
gatcttcccaacgtggtgaatgttgaagtgactcccccaactgatccaccaagtccatca
tcaccaacagaaggtgctgaagatgaagaaaatcccattaaagatcaggaaacaaatgat
cagggtgaagatgctggaaacaatggtggtgatgaaaatgacagcagtgatggtgattct
gaagatagtggtgatgatgattgtggtgatgatggtgatgacactgatgaagatagtgat
gaggaggataatgaaaaggaggagaaagaggcaaccaatgatgaagaacctttgagtctt
gaatggccagacacccgacggaaacaagtcacttacctgtgcctacttcccatcgttttc
ccgctctggctaacggtgcctgatgtacgaaatgcagcttcaaagaaatactttattggg
accttttttggatctattctgtggattggtgctttttcatatttgatggtgtggtgggcc
caccaggtcggtgagacaattggcatttctgaagagataatgggtttaaccatccttgct
gcaggcacctcaatccctgacctcatcaccagtgtcattgttgctcgcaaaggtctggga
gacatggcagtatccagttcagtgggaagcaacatcttcgacatcacagtcgggcttcct
gtaccctggttgctgtatgctgcctttcacagattcaacgcggttccagtcagcagtaat
ggcctgttctgtgccatcgttttactgttcctgatgctgctgtttgtaatcatctccatc
ggcgtctcaaagtggaagatgaacaaattcttgggcttcaccatgtttggcctctacttt
acgtttttaatcatcagcgtaatgttggaggacagaatcatagtatgcccagtttccata
tga
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