Chiloscyllium plagiosum (whitespotted bambooshark): 122539708
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Entry
122539708 CDS
T08871
Symbol
smarce1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122539708 (smarce1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpla03021
]
122539708 (smarce1)
03036 Chromosome and associated proteins [BR:
cpla03036
]
122539708 (smarce1)
Transcription machinery [BR:
cpla03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122539708 (smarce1)
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
122539708 (smarce1)
PBAF complex
122539708 (smarce1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
GCN5L1
Pepsin-I3
Motif
Other DBs
NCBI-GeneID:
122539708
NCBI-ProteinID:
XP_043530649
LinkDB
All DBs
Position
33:complement(1407957..1462041)
Genome browser
AA seq
433 aa
AA seq
DB search
MSKRPSYAPPPAPAPTTQMPSTPGFVGYNPYSHLAYNNYRLGGNPGTNSRVTDSCGPTAP
FHNGTPRASSIIGREKTSSGITIPKPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEI
GKIIGGMWRDLTDEEKQEYLNDYEAEKVEYNEAMKAYHNSPAYLAYINAKSRAEAALEEE
SRQRQSRMEKGEPYMSIQPAEDPDDYDDGFSMKHISAARFQRNHRLISEILSESVVPDVR
SVVTTARMQVLKRQVQSLMVHQRKLEAELLQIEERHQDKKRKFLETTELFNNELKRLCNL
KVEVDMEKIAAEIAQAEEQARKRQEEREKEADHVEPPQSNIPEEPPSSIEADESKVEETP
MDTDEPRNDETPETQQSSEESTATPEDKEGCQDMTDSSVEQGASESTSGTESNSAMAEET
MPEPTPESEDKKE
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagaccatcttatgcaccaccccctgctcctgctcccaccactcaaatgccc
agcaccccagggtttgtgggatacaatccatacagtcatctggcctacaacaactacagg
ctgggagggaacccaggcaccaacagccgggtcacggattcttgtggccctacggcccca
ttccacaatggaactccacgtgcttccagtataatcggcagggagaagacatcctcaggc
atcactattccaaagcccccaaagcctccagacaagcctctgatgccctatatgcgctac
agcagaaaggtatgggaccaggttaaggcctccaatcctgatctgaagctgtgggaaata
gggaaaatcatcggtggaatgtggcgggatctcacagatgaggaaaagcaggaatatctg
aatgactatgaagcagaaaaggttgaatataatgaagccatgaaagcatatcacaattct
cctgcctatctcgcttacattaatgcaaaaagtcgagctgaggcagcacttgaggaagag
agtcgccaacggcaatcacggatggagaaaggagaaccttacatgagtatacagccagct
gaggatcctgatgattacgatgatggcttttcaatgaagcacatctctgcagcgcgtttc
cagagaaaccaccgtttgattagtgagattctgagtgagagtgtagtcccagatgtccga
tctgtggtgacaacagcacgaatgcaggttttaaaaagacaggtgcagtcactgatggtt
catcagcggaagttggaagctgagctccttcagatcgaggaacgccaccaagacaagaaa
cggaaattcctggaaactacagagttatttaataatgaactaaagcggttgtgcaatttg
aaggtggaggttgacatggaaaaaattgcagctgaaattgctcaggctgaagagcaagcc
cgcaaacgtcaggaagaaagggaaaaggaggctgaccatgtcgaaccaccccagagtaat
atacctgaggaacctcctagcagcattgaggctgacgaatccaaagtggaggagaccccc
atggacacagatgagccacgtaatgatgaaacaccagaaacccaacagagtagtgaggag
agcacagcaactccagaagacaaagaaggatgtcaagacatgacagacagcagcgtggag
caaggagcgagtgagagcacctctggtacagagagtaatagtgccatggcagaggaaacc
atgccagagcctacacctgagagtgaagacaagaaagaatga
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