Chiloscyllium plagiosum (whitespotted bambooshark): 122539818
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Entry
122539818 CDS
T08871
Symbol
top2a
Name
(RefSeq) DNA topoisomerase 2-alpha isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpla03032
]
122539818 (top2a)
03036 Chromosome and associated proteins [BR:
cpla03036
]
122539818 (top2a)
Enzymes [BR:
cpla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
122539818 (top2a)
DNA replication proteins [BR:
cpla03032
]
Eukaryotic type
DNA Topoisomerases
122539818 (top2a)
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
122539818 (top2a)
Centrosome formation proteins
Centriole proteins
122539818 (top2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
HATPase_c
Toprim
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
122539818
NCBI-ProteinID:
XP_043530823
LinkDB
All DBs
Position
33:10380761..10439689
Genome browser
AA seq
1603 aa
AA seq
DB search
MASDLASSPLRPLFPNQISKLKKGDDRRLSVERIYQKKTQLEHILLRPDSYIGSVEPVSQ
QMWVFDEEVGLNCREVTFVPGLYKIFDEILVNAADNKQRDKNMSCIKINIDPENNTVTVW
NNGKGIPVVEHKIEKVFVPNLIFGQLLTSSNYDDDQKKVTGGRNGYGAKLCNIFSTKFTV
ETACREYKKSFKQTWINNMGDAKEAKIKSFDGDDYTCITFQPDLPKFKMQTLDKDIVAIM
SRRAYDIAGTCKGVKVFLNGKKLPVSGFRSYVDLYIKDKVDETGSPLKTIHEVVNERWEV
CVTMSEKGFQQISFANSIATTKGGRHVDYVTDQLVNKLIEVVKKKNKGGVAVKPFQVKNH
LWVFVNSLIENPTFDSQTKENMTLQAKSFGSRCVLSEKFIKAAMNCGVVESIMNWVKFKA
QNMLNKKCSGLKQTKIKGIPKLDDANDAGTKHSHGCTLILTEGDSAKTLAVSGLGVVGRD
RYGVFPLRGKLLNVREASHKQIMENAEINNMIKIIGLQYKKNYDDQESLKTLRYGKLMIM
TDQDQDGSHIKGLVINFIHHNWPSLLRHNFIEEFITPIVKVSKNKQEIAFYSIPEFEEWR
SNTESNKTWKVKYYKGLGTSTAKEAKEYFAEMQRHRIPFKYIGPEDDSAITLAFSRKKID
ERKEWLTNFMVDRRQRKLHGLPDQYLYGKETKYLTFNDFINKELVLFSNSDNERSIPSLV
DGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEASLMMTIVGLAQDFVGSN
NINLLKPIGQFGTRLNGGKDAASPRYIFTMLSALTRLLFPATDDNLLKYLDDDNQRVEPE
WYMPIVPMVLVNGAEGIGTGWACKIPNYDIREIVDNIRRMLDGDEPLPMLPNYKNFKGTI
FELGANQYMINGEISVLDTTTIEISELPVKTWTQTYKEQVLEPMLNGTEKTPSLITGYKE
YHTDTSVRFIVTMTEQKLAEAEAAGLHKVFKLNAPLTCNSMVLFDHVGCLKKYENVQDIL
KEFFDLRLKYYRLRKDWLEGLLGAEYGKLSNQARFILEKIEGTLVIENKPKRELIQLLLD
RGYDSDPVKRWKESQDKQQESELENTEEEEEITTSSGADFNYLLNMPLWYLTKEKKDELL
KQRDVKETELRCLKRKSPLDLWKEDLAAFIEELERVEMQEKEDELAHVGKAVKGKGGKGK
MRKLQLEETMPSPHGRRVVPRVTSAMKTEATRKNIKKKGKGETDSLAVKMEFGDKEGSSP
EYANLAERISKKVKTEAGTKTKPTAQKQTKLQFKPLAKKKNPWSDSDSMSESDDDVEVID
LPPRQKQQRAAASKAKYVLESSDEDDNNGDKMMSEVESDDECHISDSGTEFSKPKANCTL
KKAQSKPSVKSVPQENEIFQSSQESSKTFGEDMEKHIPQIVDEVLSSSDSVNEPEVPPIH
SNTYKPTAKKAAAKPAGEKAAPKKRALGKKPTTVSKKDENQPSIFDVLTKQKAAPKFSKT
ALKAKNKTSSDDDNVTKKVAPAKTKKTKRKKDSDSDSEFDFGLKPAKSAANKKSKMKEDD
SYHIDIDEDSNSNISLGGAPPRVTSRAKKPVQYLEDSDDDDLF
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgatcttgcatcaagtcccttaagacctttgtttcccaatcaaataagtaag
ttgaagaaaggtgatgatcgccgattgtctgttgaaagaatctatcagaaaaaaacacag
ttggagcatattttgctacgccctgacagttacattggctctgtggaaccagtttcacaa
caaatgtgggtgtttgatgaagaagttggcctaaattgcagagaagtgacttttgttcct
ggtttgtacaaaatatttgatgaaattctagtgaatgcagcagataacaagcagagggat
aaaaacatgtcgtgcatcaaaatcaacattgatcctgaaaacaacactgtaactgtctgg
aacaatggaaagggaattcctgttgtggagcataaaatagagaaggtttttgttcctaat
ctaatttttggccagttactgacctccagcaactatgatgatgatcagaagaaagttact
ggtggccgaaatggttatggtgcaaaactctgcaatattttcagcaccaagtttacagtg
gaaactgcttgcagggagtacaagaaatccttcaagcagacttggataaacaatatggga
gatgcaaaagaagctaaaatcaagtcctttgacggcgatgactacacttgtatcactttt
caacctgatcttcctaaattcaaaatgcagacgcttgataaagatattgtggcgataatg
tcacgaagagcatatgatattgctgggacttgtaaaggagtcaaagtgtttctaaatggc
aagaaattacctgtttctggattccgtagctacgtggatctttacataaaagataaagtg
gatgaaacaggtagcccacttaaaacaatccatgaagttgtaaatgaacggtgggaagtc
tgtgtgactatgagtgagaaaggcttccaacagataagctttgcaaacagcattgctacc
acaaagggtgggagacatgttgactatgtcactgaccaattagtgaataaactaattgaa
gttgtcaagaagaaaaataaaggaggtgttgcagtgaagccatttcaggtcaagaaccat
ctttgggtctttgtgaacagtttgattgagaacccaacttttgactcccagaccaaagag
aatatgacccttcaagcaaagagctttggatcccgatgtgtgttatcagagaaatttatc
aaagcggcaatgaattgtggtgtcgttgaaagtatcatgaactgggttaagtttaaagct
cagaatatgctcaataagaaatgctcaggattaaaacaaaccaagatcaaaggcattcct
aaactggacgatgctaatgatgctggaacaaagcattctcatggttgtaccctcatccta
acagagggtgattcagccaaaactttggctgtatcgggcttaggcgttgttggcagagac
agatatggcgtgtttccacttagagggaaacttctcaatgtacgagaagcctctcacaaa
cagattatggaaaatgccgagatcaacaacatgatcaaaatcattggtctgcaatacaag
aagaattatgatgatcaggagtctcttaagacactccgttatggaaaattgatgattatg
acagatcaggatcaagatggttcccatatcaagggtttagtgatcaatttcattcatcac
aactggccttcattgctcagacataatttcattgaggaatttattactccaattgtaaag
gtgtcaaaaaacaagcaggaaattgcattttacagtattcctgaatttgaagagtggaga
agtaatacagaaagcaacaagacttggaaagtaaaatactacaaaggtttgggtacgagc
actgctaaggaagcaaaggaatattttgctgaaatgcagaggcatcgtatcccctttaaa
tacattggaccagaagatgattctgcaataaccctggcatttagtcggaaaaaaattgac
gaacgcaaggaatggctaactaacttcatggttgacagaagacagcgaaagttacatgga
ttaccagatcaatatttgtatggaaaagaaacaaaatatttgactttcaatgactttatt
aataaggaactggtgcttttttcaaattctgataacgagaggtcaattccttctcttgtg
gatggattgaaacctggtcagcgcaaggttttattcacctgttttaaacgaaatgacaaa
cgtgaagtcaaagttgctcagttggctggttctgtcgctgaaatgtcagcctatcatcat
ggtgaggcatcccttatgatgacaattgttggattagctcaggactttgttggcagcaat
aatattaatcttctgaagccaattggtcagttcggtacaaggcttaatggtggcaaagat
gctgcaagtcctcgatatattttcactatgctcagtgctttgactcgtctgctgtttcct
gcaacggatgataacctcttgaaatacctggatgatgataaccaacgagttgagccagag
tggtacatgcctattgttcctatggtgttagtgaatggtgcagaaggtattggcacagga
tgggcttgcaaaatccccaattatgatataagagaaattgttgataacatcagacgtatg
ctggatggagatgaaccattgcccatgcttcctaattacaagaacttcaagggtacaatt
tttgagttgggtgcgaatcaatacatgattaatggtgaaatttcagtattggataccaca
acaatagaaatttctgaacttccagtcaagacatggactcagacatacaaagaacaggta
ctagaaccgatgttgaatggaacagagaagactccatcactgatcactggttacaaggaa
taccacactgataccagtgtacgtttcatagtgacaatgactgagcaaaaactggctgag
gcagaagcagcaggactgcacaaagtcttcaaactaaatgcccctctcacgtgcaattca
atggtgttattcgaccatgttggatgtctgaagaagtatgaaaatgtgcaagacatactg
aaggagttctttgacttacggcttaaatactacagattaagaaaggattggcttgagggg
ttactaggagcagaatatggaaaattaagcaaccaagctcgttttatcttggagaagatt
gaaggcacattggtcattgaaaacaaaccaaaacgtgaattgatccagttgctgctcgac
cgaggttatgattcagatcctgtgaaaaggtggaaagagtctcaggataagcagcaagaa
tctgagctggaaaatacagaggaagaagaggaaatcaccacttcatctggggcagatttc
aactatcttttgaacatgcccttatggtatctgactaaggaaaagaaggatgaactgctt
aagcagagagatgtcaaagaaaccgaattgagatgtctgaaaaggaaaagcccgttggac
ctatggaaggaagacctggcagccttcatcgaggagcttgagcgtgtggagatgcaggag
aaagaagatgaattggctcacgttggtaaggctgttaaaggtaaaggtggtaagggtaaa
atgaggaagctgcagttggaagaaactatgccatctcctcatggcagaagggttgtcccc
agagttacttctgctatgaagacagaggccaccaggaaaaatatcaagaaaaaaggaaag
ggtgaaacagattctcttgctgttaagatggagttcggtgataaagagggaagttctcct
gaatatgcaaaccttgcagaacgaatttccaagaaagtgaaaactgaagcagggaccaag
acaaagccaacagctcagaaacaaactaaacttcaatttaaacctcttgcaaagaaaaag
aatccttggtccgattcagattcaatgtcagaatcagacgatgacgtggaggttattgat
cttcctcccagacagaaacaacagagggctgcagcttcaaaggccaaatatgtgcttgaa
tcatctgatgaggatgataataatggtgataaaatgatgagtgaagtggaaagtgatgat
gaatgtcatatttctgacagtggtactgaattctccaaaccaaaggcaaattgtaccctt
aaaaaagcccagtcgaagccttcagtaaaatctgttccccaggagaatgaaattttccaa
tcatcacaggaatcttcgaaaacattcggagaggacatggaaaagcatattcctcaaatt
gttgatgaggttttatcctcttctgattctgttaatgaacctgaagttcccccaatccat
tccaacacttataaaccaacagcaaagaaagcagcagccaaaccagctggagaaaaggca
gcaccaaaaaaacgtgctcttggcaagaaacccaccactgtttctaaaaaagatgaaaac
caaccttccatttttgatgttctcaccaaacaaaaggctgctccaaaattttccaagact
gctctgaaagcaaaaaataaaacatcttctgatgatgacaatgttacaaagaaagttgca
ccagcgaagactaaaaaaactaaaagaaagaaggactctgactcagattcagaatttgac
tttgggttgaaacctgcaaagtccgctgcaaacaaaaaaagcaagatgaaggaagatgac
agttaccatatcgatatcgatgaagactccaattcaaatattagtctaggtggagcacct
cctagagtgaccagccgtgcaaagaagcctgttcagtacttggaggactctgatgatgat
gatttgttttaa
DBGET
integrated database retrieval system
