Chiloscyllium plagiosum (whitespotted bambooshark): 122539881
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Entry
122539881 CDS
T08871
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog isoform X1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_2
zf-RING_UBOX
BRCT_2
PTCB-BRCT
RING_XB3-XBAT31
zf-Nse
zf-C3HC4_3
zf-RING_5
zf-RING_6
zf-RING_10
zf-rbx1
DUF5486
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
122539881
NCBI-ProteinID:
XP_043530954
LinkDB
All DBs
Position
33:complement(15588499..15674510)
Genome browser
AA seq
1922 aa
AA seq
DB search
MSLCKSEIEHVHKVLSLMLKNLECPICLELMKEPVSTKCDHQFCRFCILKLFSKKSTIPC
PLCKNITTKRSLQESTRFKQLTEGIMKMIHAFQLDTGYEFSIDNTPKKTPSENSAYRDLW
KDDTQAWGNNTPQNVIATGISKNRTLNVCSDPPLTEFVRRVSTRNKRQKVEGTTAYVGID
SDSSEEPLFKTHINIKSTLRSRTVNMNTTPQKEKIDQCDNDEKLYQGKKSKLSKPILEEL
FSSKIDDVSENTENTDAGDYSCAAESETEQKQMTEEKSVSNFCSPEAPGKVIAVENSLQL
AAEWVNKQNCPAGNKLFTDGTMPLSEKSVLEKDADLLDSNEKLNQKVSNQMVKDETDFQT
SVTQSKNSSVPEASRRKSQRIMKVSEWLSTINVDEVATLAVESNPCDQNVESDSLAERVS
PASEEGTSSAEDTENVKNDHLSSFKHTRMPKTVPTDVKNKVFVKTYKRDKRKSVPVNWSF
NSDSKNDDLTPHREGVFIGCNKTQKTKRKSNRLNPEDFIKRAVNDENNHDSDVQNASNEI
DPKENVPESKDIETEASKEILDESSNIKQIDKLVITTPPKVAISNDVVVEDAEQNVQQLK
LELCKTDGESKKKLNKSLGRKGKKSSINQTKKRTKPLQLVNHIVRTDRSPRSDPIVLNEN
KIDSFPSSEEVKVELETRITRRSNRLKLLDEELIMQDKNKGKKSKLTRSHSILSPCTSCA
PFAEPSEKNTDVGMVCAESENLSNQDIIVQACKDHVPDADNSQQEYGASHGSLAKSVVQE
FEGSAVHQQLKDCHKAAETEDAAVSAEHPLCSDHSSFIAVSDRHSKGSSSEASLLLLAPQ
PVHGEKPSDPQLHCSYVGKGEVTPCGSHSRVGTIIGKADSREDVSIKQQTSSKETNEDSE
VDTELLLKSFRLSKRRSFILMPATEYQAAQNACATAPDTKSLDNIAASNSEEINTEGTVI
RDTDGSDAPPELGKVNSDKIDSPIRDAKIANDDKSEPCTSELDNVQQLSNRENCNSVEIV
PPTASNVGLPLSPVLPQYVQEVVPPSRSRLKGKRNTRLLRRKGSNCSSSPVTTEKEIVDS
DRSSEAKANEHFNSNAKDNSWCIKTTIQVKNRGLEVAVSQEAQHNVLSTRLKSSAQPESE
LLFSARDLLGQEASEKDNCQENTLEKLSKEREFYKTRNILHNGPLAVKNTTENKLDNSTD
VARCHSLPTFMNAEQSTPVKNKTSENKCPQNSQISSITPDGLLDGAKGSRNNISTKSVDE
LDEMQSNYELREREEQLRQHEVAKEKPNERSSTQDQLRGRRKRPVKLSTSESETSDEELP
CFQIFGLNRSRSNAPTASESPSVTGCLSLKDSLVQAFSLPNSSTEVKKTDYTEANKLQEN
VGSEGCLKNECLSPSQESGESPDLFSSQSDGSSLDASPQPKMSSQTLKQINALSAAELEN
REEKHYSTVEETVGAPCLQPPCLGMEINEGQNIPGNGSEASHTDDSSPESEILTTQQRRA
IQDNIKKLEREMAVLEAVLDERGSQDSEHMLSMNHFEGCPELTEHDGNAVSAGFHQGHTE
NLQSRSTCLPVAEALNTSVTFMHEDKEESECPKLLGGLEFKQIPEKLQAVNDLLNQFQAK
AGSKDEMIDSPNAAQKKEKTKMHVNPNCEEESQPTENVAGNASTLQPENENTNRKTTLQS
SEQSTSSPTSSPVFNKTSNAIKNSLVTVQSKMSLVASGLNKNENVLVEMFARKTGAAFHS
TFSSSTTHVIMKTDTDLVCERTLKYFMGIAGRRWVVSYQWIIECFRKGMVINEHEFEVKG
DVINGRSHTGPRKARKTADDKLLLSHYEVCCFGSFTGMSRDQLEWMVELCGASIIKEPYL
FTYSPNRTAVVVVQPDANPENTDYRAIQRQYSNFVVSREWILDSVACYQNHQLEAYLVCV
PH
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgtgtaagtcagagattgagcacgtgcacaaggttctctcgttaatgctgaag
aatttggagtgtccaatatgcttggaattgatgaaagaaccagtttcaacaaaatgtgat
catcaattctgtcggttctgtatattgaagcttttcagtaagaaaagtacaataccgtgt
ccattatgtaagaacataactaccaagaggagtctgcaggaaagcacacgctttaaacaa
cttacagaaggcattatgaaaatgatccatgcctttcaattggacacaggttatgagttc
tccatagataacacaccaaaaaagactccaagtgagaacagtgcttacagagacttatgg
aaagatgacacccaggcttggggcaacaatacaccacaaaacgttatagctacgggaatc
tccaaaaatcgcactttgaacgtgtgctctgacccccctttgactgaatttgtaagaaga
gtttccacaagaaataaaaggcagaaagtagagggaacaacagcctatgttgggattgat
tcagattcttccgaggagcctttgttcaaaacacatattaatataaaatcaacattacgt
tcaaggactgtgaacatgaatactactcctcaaaaagagaaaattgatcagtgtgacaat
gatgagaaactttaccaagggaaaaaatcaaaattatcgaaaccaatactggaggaactg
ttttcatcaaaaatagatgatgtgtcagagaatactgaaaatacagatgcaggtgattat
tcctgtgcagctgaatcagaaacagagcaaaagcaaatgactgaggaaaaatctgtaagt
aacttctgtagcccagaggcacctggcaaagtcattgcagttgagaactccttacaactt
gctgcagaatgggtaaataaacaaaattgccctgctgggaacaaacttttcactgacgga
acaatgcctttgtcagaaaaaagtgtgctcgagaaagatgctgatctgttggacagtaat
gaaaagttgaatcagaaagtttcaaaccaaatggttaaagatgaaactgattttcagaca
agtgtaactcagtctaagaattcatcagttccagaggcatccaggaggaaaagccagaga
atcatgaaagtcagtgaatggttatccaccattaatgttgatgaggtggcaactcttgct
gtcgaatctaatccatgtgaccagaacgttgagtcagattccttagcagaaagagtgagt
cctgcatctgaggaaggaacttccagtgcagaagatactgaaaatgttaaaaatgatcat
ctttcctctttcaaacacacaagaatgccaaaaacagttccaactgatgttaaaaacaaa
gtctttgtgaaaacctataaaagagacaagcgaaaaagtgttccagtcaactggagtttt
aattctgacagtaagaatgatgatttaactcctcacagagaaggtgtctttatcggttgc
aataaaactcaaaaaacaaaaagaaaaagcaatagactaaaccctgaagactttataaag
agggctgtaaatgatgaaaataaccatgatagtgatgttcagaatgcaagtaatgaaatt
gaccccaaagagaatgtccctgaatctaaggacatcgaaactgaggcaagtaaagaaata
ttagatgagtcatctaatatcaaacaaattgacaaactagttattactacaccacccaag
gtcgcaattagtaatgatgtagtagtggaagatgctgagcaaaatgtgcagcagctcaag
ttggagttatgtaagacagatggtgagagcaagaaaaaattgaacaaaagtttggggaga
aaaggaaaaaagtcatcaataaatcagactaaaaaaagaactaaacctttgcagctggtt
aatcacattgtaagaactgacagaagtccgagaagcgacccaattgttttgaatgagaac
aagattgatagtttcccaagcagtgaagaagtgaaggttgaactagaaaccaggattact
agaagaagcaacagattgaaattactggatgaagagttgatcatgcaagacaaaaacaaa
gggaagaaatctaaattgaccaggtcgcattcaatcctctcaccttgtacaagctgtgcc
ccttttgcagagcctagtgagaaaaatactgatgttggaatggtgtgtgcagaaagtgag
aatttatcaaatcaggatattatagttcaagcttgtaaggaccatgtaccagatgctgac
aattcacagcaagagtatggagcttctcatggatcacttgcaaaatctgttgtacaagag
tttgaaggcagtgctgtccatcaacaattaaaggactgccacaaagcagcagaaactgag
gatgctgcagtgtcagctgaacatccattatgttctgatcattcctcattcattgcagta
tctgacagacactcaaagggttcaagttcagaagccagcttgttactacttgcccctcaa
ccagttcatggggaaaaacctagtgacccacaattacattgcagttatgtgggtaaaggt
gaagtgactccatgtggaagtcattccagagtaggaactataattggtaaagcagacagc
agagaagatgtttctatcaaacaacagacaagttcaaaagagacaaatgaagacagtgaa
gtagacactgaactacttctaaagtctttcaggttatcaaaacgaagatcattcattctt
atgccagccacagagtatcaggctgcacaaaatgcatgtgcaacagctccagataccaag
agtcttgataatatagcagcttctaattcggaggagatcaatacagaaggtacagtaatc
agagacactgatggaagtgatgcacctccggaactggggaaagttaattcggataaaatt
gactctccgattcgagatgctaagattgccaatgatgataaaagtgaaccttgcacatct
gagttagacaacgtacagcaactatcgaatcgggagaattgcaattctgtagaaattgtg
cctccaactgcgtcaaatgttggattgcctctttcgcctgtacttccacagtatgtccag
gaggtggtgcctccatcaaggagcagattgaagggaaaaaggaacaccaggttactcaga
cgaaaaggatcaaattgtagtagctcaccagttactacagagaaagaaatagttgattct
gatagatcaagcgaggccaaagctaatgagcacttcaatagcaatgcaaaagacaattca
tggtgtataaaaaccacaatacaagtcaaaaacagaggcctagaagtagctgtcagccag
gaggctcagcacaatgtcttaagcactagacttaaatccagtgcccaaccggagtctgaa
ttattgttttcagcaagagatctgcttgggcaagaagcaagtgaaaaagataattgtcaa
gaaaatactttggaaaaattgtcaaaagagagagaattttataaaactagaaacatactt
cacaatggtcccttagctgtcaaaaacaccacagaaaacaagttggataactcgactgat
gttgcaagatgccactctctgccaacatttatgaacgcggaacaaagcacacctgtcaaa
aataaaactagtgagaacaaatgtccacagaattcacagatatcttccataactcctgat
gggctgctggacggtgctaaaggaagccgaaataacatcagtacaaaaagtgtggatgaa
ctggatgaaatgcaaagtaattatgagttgagagagcgtgaagaacaactgagacagcat
gaagttgcaaaagagaaaccgaatgagaggagctcaacacaagatcaacttcgaggccgg
aggaagcgaccagttaaactatcgacttccgaatctgaaacgagtgatgaagaactgccg
tgttttcagatctttggattgaacagatcgcgatcaaatgctccaactgcgtcagaaagc
ccctcagttacaggatgtctgtctttaaaagactcactcgtgcaagccttttcattgccc
aacagcagcacagaagttaaaaaaactgattatactgaagcaaataaattgcaagaaaat
gtaggtagcgaaggctgtctcaaaaatgaatgcctttccccaagccaagaatctggagag
tctcctgatctgttctcttctcagtctgatggttcatcccttgatgccagtccccaacca
aaaatgagcagtcagactctgaaacaaataaatgctttaagtgctgctgaattggaaaat
cgagaagagaaacattacagcacagttgaagaaacagtgggagctccatgtctgcagcca
ccgtgtttgggtatggaaattaatgaaggtcagaacatacctggtaatggtagtgaagcc
agccatacagatgactcctctccagagagtgagattctaaccacacagcaaagacgtgca
atacaagataacatcaagaaacttgaacgtgaaatggctgtgcttgaggcagtcctggat
gaacgtggaagccaagactctgagcacatgctgtcaatgaaccacttcgaaggctgccca
gagttaactgaacacgatgggaatgcagtgagtgctggctttcatcaggggcacacagaa
aacttgcaaagcagatcaacatgtcttccagttgctgaagccctaaatacaagtgtaacc
tttatgcatgaggacaaagaggagtctgaatgcccaaagttgcttgggggtttggaattt
aaacaaataccagagaaacttcaggcagtgaatgacttgctgaaccaattccaagctaaa
gctggatctaaagatgaaatgatcgattctccaaatgcagcacagaagaaagagaagaca
aagatgcacgtaaacccaaattgcgaagaagaaagccaacctacagagaatgtagctggc
aatgcaagtacattacagcctgaaaatgagaacactaacagaaagacaacgttacaaagt
tccgaacaaagtacatcttcaccaacttcatctcctgttttcaataaaacttcaaacgcc
atcaagaactcacttgtaacagttcaaagtaaaatgtccttagtagcctctgggctgaac
aaaaatgaaaatgtgttggttgaaatgtttgcaagaaaaacaggggccgcgtttcacagt
actttttcgtccagcacaactcatgtcatcatgaaaacagatacagatctagtttgtgag
agaacactgaagtacttcatgggaatagcagggaggcgatgggtcgtcagttatcaatgg
atcattgaatgtttcaggaaaggcatggtgattaatgagcatgagtttgaagtgaagggt
gatgtaatcaatggaagaagtcacactggcccaagaaaagcaagaaaaacagcggatgat
aaactgctgttaagccattatgaggtttgctgctttggttcttttacaggtatgagcaga
gatcagctagagtggatggtagagctgtgtggtgcctccataattaaggaaccttattta
ttcacgtacagtcctaatcgtactgcagtggtggttgtgcaacctgatgctaatccagaa
aacactgattatcgagcaatccagagacagtacagcaactttgtcgtttcccgagaatgg
attttggacagtgtagcttgctatcagaaccatcaactggaagcctatctggtctgcgtt
ccacattga
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