Chiloscyllium plagiosum (whitespotted bambooshark): 122539920
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Entry
122539920 CDS
T08871
Symbol
hdac5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
122539920 (hdac5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122539920 (hdac5)
Enzymes [BR:
cpla01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
122539920 (hdac5)
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
122539920 (hdac5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
122539920
NCBI-ProteinID:
XP_043531039
LinkDB
All DBs
Position
33:complement(19624104..19954880)
Genome browser
AA seq
1117 aa
AA seq
DB search
MLLKPKVPGLKKMLQTIYETESCFSSDGVSGQEQPLELLPQSRVHTMPTSAVEVKSSLPV
TMQTATPVDLRTDPRIPIPTVDPLLREQQLQHELLMLKQQQQIQKQLLFAEFQKQHEHLT
RQHEVQIQEHLKQQQEILAVKRQQELEQQRKLEQQRHEELEKQRLEQQLLMLRNKEKGKE
SAIASTEVKLKLQEFLLSKTASKDSVTSGLNHSLPQHPKSWGAHHASLEQSSPPQSTTPP
TYKVPLLGSYDGKDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTIISTFKKR
AIEITVSSVCNSAPGSGPSSPNSSNNIPAENGTTGSVPNIHSEHMHPHHKAVNADGSVSQ
LSLYTSPSLPNISLGLPATVTVSNAQINASQKMSAQQEAERQAIQSLRQGGALTGKFVST
TSLPSGLPTTAVEGETNTHSHPSLLQHVLLLEQARQQNALIAVPLHAQSPLVTGERVSTN
LRTVNKLPRHRPLSRTQSAPLPQSPQALQQLVMQQQHQQFLEKQKQYQQQIQLKMLSKSS
ESPRQPPIHPEETEEELCEQQDMQEDQAPASSSSINSGGSEATNDILEQDAMQVKDEPPD
SEEEDQLEDQKEGEEQLPHFNQQQFLDQQRMQQLHVYQASVAMGSMSVTDRHQPLCRAQS
SPATANLKNPGTEKPIKHLFTTGLVYDTFMLKHQCTCGNTNNHPEHAGRIQSVWSRLQET
GLLNKCERIRGRKATLDEIQTVHSEHHTLLYGTSPLNRQKLDSKKLLGPITQKMYALLPC
GGLGVDSDTVWNEMHSSSAVRMAVGCVVELSFKVASGELKNGFAVVRPPGHHAEESTAMG
FCFFNSVAISAKLLKQKLNVGKILIVDWDIHHGNGTQQAFYSDPNVLYISLHRYDDGNFF
PGSGAPDEVGTGPGVGFNVNIAWTGGVDPSNGDVEYLTAFRTVVMPIANEFSPDVVLVSA
GFDAVEGHPSPLGGYSATAKCFGYLTKQLMKLAAGRVVLALEGGHDLTAICDASESCVSA
LLGNELDPLPQEILQQKPNTNAVASLEKVIEIQSKHWSSVKRYTSTVGYSLLEAQKHEKE
EAETVTALASLSVDTAQSNSEPEARQGDEPMEEEPAM
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgttactgaagcccaaagtgcctggacttaaaaagatgttgcagactatttatgaaact
gaatcgtgtttttcctcagatggtgtatctggacaagagcagcccctagaattgttgcca
caaagtcgggtgcacactatgccaacatcagctgttgaagttaaatcttccctgcctgtg
actatgcagactgctactccagttgacctgcggacagaccccagaatcccaatcccaact
gtggacccccttctacgtgagcagcagctacaacatgaactgctgatgctgaagcagcag
caacagatccagaaacaactattatttgctgagttccagaaacagcatgaacacctgaca
aggcagcatgaggttcagattcaggaacacctaaagcaacaacaggagatcctagcagtg
aagcgtcagcaagaattggaacaacaacgcaaacttgaacagcaacgacatgaagagttg
gaaaaacagagactggaacaacaattgcttatgcttcgaaacaaagagaaaggcaaggaa
agtgcaatagctagtacagaagtcaaattaaaacttcaggagttcctgctaagtaaaact
gcttcgaaggattctgtgaccagtggattaaatcattccctccctcagcatcccaaaagc
tggggagcccaccatgcatcactggaacagagctccccaccccagagtacaactcctccc
acctacaaagtcccactgctgggatcatatgatggaaaagatgattttccactccgaaaa
actgcttctgaacccaatttgaaggtacgttccagattaaaacagaaggtggctgagagg
agaagcagcccattattgaggagaaaagatggcacaataattagcacattcaagaagaga
gctatagaaatcacagtttcctcagtttgtaacagtgcacctgggtctggccctagttct
ccgaacagttcaaacaatattcctgctgagaacggaacaactggctctgtacccaatatt
cattctgagcatatgcatccacatcacaaagcagtgaacgctgatggatcagtaagtcag
ctgagtctctatacatctccttcactacccaacatttcccttgggctcccagctacagtc
acagtatccaatgcacagatcaatgcatcacaaaagatgtcagcccaacaagaagcagaa
aggcaagctattcagtctttgcgtcagggtggtgccttaacagggaagttcgtgagtacc
acctcgctaccatcaggtttgcccacaacggcagttgaaggagaaaccaacactcacagc
cacccctcgcttcttcaacatgtgctgcttctagagcaagctcgtcagcaaaatgctttg
atagctgtgcctctccatgcacaatcacctttggtgacaggtgagagagtttccaccaat
ctccgaacagtaaacaagttgcctcggcaccgcccgctaagtcgtacccaatctgctcct
ctaccccagagtccccaggctttgcagcagctagtgatgcagcaacaacaccaacagttc
ttggagaaacagaaacagtaccaacaacaaatccaacttaagatgctttccaagtcaagt
gaatcacctcggcaacctccaattcaccctgaggagactgaagaagagttgtgtgagcaa
caggacatgcaggaagatcaggcacctgcaagtagcagcagcatcaattctggaggaagt
gaagcaacaaatgacattcttgaacaggatgcaatgcaggtgaaggatgaaccaccagat
agtgaagaggaagatcagctggaagatcagaaagaaggagaagaacaacttccgcatttt
aatcagcagcaattcttggaccagcaacgcatgcaacagcttcatgtgtatcaggcttct
gtagctatgggaagtatgtctgtgacagacaggcatcaaccactctgcagagcccagtcc
tccccagcaactgcaaacttaaaaaatcctggcactgagaaacctatcaagcaccttttc
actactggtttagtctatgacactttcatgttgaagcaccagtgcacttgtgggaacact
aacaaccatccagaacatgcagggcgaatacagagtgtctggtccaggcttcaggaaaca
gggttacttaacaagtgtgagcgaatccggggtagaaaagcgactttggatgaaattcaa
acagtgcattcagaacaccacacattgttatatggcaccagccctctgaacagacagaag
ctggacagtaagaagttgctagggcctattacacagaagatgtatgcactgctaccctgt
ggtggacttggggtggatagcgacactgtctggaatgaaatgcattcatctagtgctgtc
cgcatggctgttggctgcgttgttgaactctcattcaaggtggcctcaggggagctcaag
aatggttttgctgttgtcagaccgccaggacatcatgcagaagaatccactgcaatggga
ttttgctttttcaattccgttgcaatttctgcaaaactacttaagcaaaaacttaacgtt
ggaaaaatcttaattgtggattgggatattcaccatggaaatggtacacagcaggctttc
tatagtgaccctaacgtgttgtacatttctcttcatcggtatgatgatggaaatttcttt
cctggcagtggtgccccagatgaagttggaacaggacctggagttggatttaatgtcaat
attgcttggacaggtggtgtggatccctctaatggagatgtggagtacttgacagctttc
aggacggtagtgatgcccattgccaatgaattttctcctgacgttgtgctggtatctgct
ggctttgatgctgtggaaggccatccctcaccactcggtggatactctgcgacagctaag
tgttttggctacctgaccaaacagctgatgaagctggctgcaggacgtgtggttcttgct
ttggaaggaggacatgatctcactgccatctgtgatgcatccgagtcctgtgtttcagcc
ctgctgggtaatgagcttgatcctcttccacaagaaatacttcaacaaaaacccaacaca
aatgctgttgcatcactagaaaaagttatagaaattcagagtaaacactggagttcggtg
aagcgctatacttctactgtaggctactcgctgctagaagcccaaaagcatgaaaaagaa
gaagcagaaactgttacagcattagcctctctgtcagtagacactgcacaaagcaattct
gaaccagaggccaggcagggagatgaaccaatggaagaagagccagcaatgtaa
DBGET
integrated database retrieval system
