Chiloscyllium plagiosum (whitespotted bambooshark): 122539955
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Entry
122539955 CDS
T08871
Symbol
ubtf
Name
(RefSeq) nucleolar transcription factor 1 isoform X1
KO
K09273
upstream-binding transcription factor
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122539955 (ubtf)
03021 Transcription machinery [BR:
cpla03021
]
122539955 (ubtf)
Transcription factors [BR:
cpla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
122539955 (ubtf)
Transcription machinery [BR:
cpla03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
122539955 (ubtf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_5
HMG_box_2
HMG_WDHD1
Protamine_like
Motif
Other DBs
NCBI-GeneID:
122539955
NCBI-ProteinID:
XP_043531115
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All DBs
Position
33:complement(25824320..25897441)
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AA seq
771 aa
AA seq
DB search
MNGETTMSATVELSDAKEDWPKEDILGLLDSMRSIVPSNDVMKFKTTESHMDWNKVTFAH
YTAEMCKQKWTEISHEVRKFRTLSELIIDAQEHVKNPYKGKKLKKHPDFPKKPLTPYFRF
FMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQEFQKEKEDFERNMVRFRED
HPELLENVKRTDVPEKPKTPQQLWYLHEKKAFMKLHPQATMKDVKEALGKQWSQLSDKKR
LKWIGKSLEQRELYEEAMRDYVIRHPEQSINLDDLTKNTLTKAERQLKDRFDGRPTKPPP
NGYSLYCAELMSNMKDIPSTERMVLCSKQWKMLSQKEKDAYQKRCEQKKKEYEINLHRFL
LSLPEHEQQRVLSEEKMIGINKRASSTLKQGGVKGIPSPPSDASKTTSDKPKRPISAMFI
FSEEKRKKLQEEEPELSESELTRKLARMWTELSEKKKEKYRRMEAAAKAESEQKKQSYGK
DGKGSAMRGKLPEPPKTAEEIWQQNVIGDYLAKYRNDRTKAVRTMEATWSAMEKKEKLMW
IKKAAEDQKRYEKELSEIRTPAANTNKKMKFEGEPKKPPMNGYQKFSQELLTGGELNHLN
LKDRMVEIGKRWRKVTQAQKDRYKKMAEEQQSQYKINLEAWLKSLSPQERAMYKEYTTNK
RKSSAKAASPNPKMKIALQAQSASETEDSDEEDDEEDDDDDDDDDDEEKANSSDSDDSSG
SDSDEESEEEDDADENADDDDDDDEGEDDEENQSDSSSSSSSEESSDSDSD
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgaacggggagacaaccatgtctgccactgtcgagctgagtgatgcaaaagaagattgg
ccaaaagaggacatccttggcctattggatagcatgaggagcattgtcccttctaacgat
gtgatgaaattcaaaacaacagagtctcacatggattggaataaggtgacttttgcccat
tacacagcagagatgtgcaaacagaagtggacagaaatctcacatgaagtgagaaagttc
cgtactttatcagaactcattatagatgcgcaagaacatgtgaagaatccttataaaggg
aaaaaactcaagaaacatcctgattttcccaagaagcccctcacgccttattttcgattc
tttatggagaaaagggcaaaatatgcaaagcttcatcctgaaatgagcaacttggatctg
actaaaattctctccaagaaatataaggagctgccagaaaagaagaagatgaaatatatt
caggagtttcagaaggaaaaagaagactttgaacgtaatatggtcagattcagagaggac
catcctgaactgttagagaatgtgaagagaacagatgttccagagaaacctaaaacaccc
cagcaactctggtaccttcatgagaagaaggctttcatgaagctgcatccacaggcaact
atgaaggatgttaaagaggcactggggaagcagtggtcccagctatctgacaagaaacga
ctcaaatggattggcaaaagtttggagcagcgtgagctctatgaggaagcaatgagagat
tatgttatacgtcacccagaacaaagcatcaatctggatgacttgaccaaaaatactctg
actaaagctgagcgacagctcaaggacaggtttgatggtcgacccacaaagccaccaccg
aatggctattctctctattgtgctgagctaatgtccaacatgaaagatattcccagcact
gagcgtatggtactgtgcagcaagcagtggaagatgttgtctcagaaagagaaggatgca
tatcagaaacgatgtgaacaaaaaaagaaggagtacgaaattaatcttcatcggttttta
ctgagcctccctgagcatgagcaacaaagagtcctttctgaagaaaagatgattggaata
aacaaaagagcttcgagcaccttgaaacaagggggagttaaaggcatcccatcgccacct
tcagatgcctcaaagactacttctgacaaaccaaagcgtccgatctctgccatgttcatt
ttctcggaagagaagcgcaagaagttgcaggaggaggagccagagctgtcggagagtgaa
ctgacaagaaaattggccaggatgtggactgagctgtctgagaagaaaaaggagaagtat
cggcgcatggaagcagcggcaaaggccgaatcggaacagaaaaaacagagctatggaaaa
gatggaaaaggctctgctatgcgagggaagctgcctgagccacccaagactgcagaagag
atctggcagcagaatgtgattggagattatttggccaagtacaggaatgaccgcactaaa
gctgtcagaacgatggaggctacttggagtgcaatggagaaaaaggagaagttaatgtgg
attaaaaaagcagctgaggatcaaaagcgatatgagaaagaattaagtgaaatccgaaca
ccagcagccaacacaaacaagaaaatgaaatttgaaggggaaccaaaaaagccacccatg
aatggttaccagaaattttcccaggaactcctcacaggcggtgagttgaaccatctgaat
ctgaaggaccggatggtagagattggtaaaagatggcggaaagtcactcaggctcagaag
gaccgttataagaaaatggcagaagaacagcaaagccaatacaaaatcaatctagaagcc
tggcttaagagcttatcgccccaggagagagccatgtacaaggaatacactacaaataaa
cgcaaaagttctgcaaaagcagctagtccaaatcccaaaatgaaaattgcattacaagca
cagagcgcaagtgaaactgaggattctgatgaagaggatgatgaagaagatgacgacgat
gatgatgacgatgatgatgaagaaaaggccaattcttcagattctgatgactcctcaggt
tcagacagtgatgaagaaagtgaggaagaggatgatgcagatgagaatgcagatgatgat
gatgacgatgacgagggtgaagatgatgaagaaaatcagtctgacagcagcagcagttct
tcatcagaagagtcctctgactcagactctgactga
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