Chiloscyllium plagiosum (whitespotted bambooshark): 122539982
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Entry
122539982 CDS
T08871
Name
(RefSeq) integrin alpha-8-like
KO
K06584
integrin alpha 8
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04510
Focal adhesion
cpla04512
ECM-receptor interaction
cpla04514
Cell adhesion molecules
cpla04810
Regulation of actin cytoskeleton
cpla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122539982
04514 Cell adhesion molecules
122539982
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122539982
09142 Cell motility
04820 Cytoskeleton in muscle cells
122539982
04810 Regulation of actin cytoskeleton
122539982
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpla04515
]
122539982
Cell adhesion molecules [BR:
cpla04515
]
Integrins
Integrin alpha subunits
122539982
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Prismane
Motif
Other DBs
NCBI-GeneID:
122539982
NCBI-ProteinID:
XP_043531169
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Position
33:30934142..31042516
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AA seq
676 aa
AA seq
DB search
MIKHLVNFYFSLAVFDLDAKVWKMHACYLMEILSVYLLGLLHLHAFNFDAENPIIYSGPE
GSYFGFSVEFYLPDGGNPGVLIGAPKANTTQENIIEGGAVFLCPWSSNGNHCNIIPFDTE
GNRHIHNVIEEMKDYKSHQWFGATVKSLKDQVLACAPLYHWKYSRTINSKVETGGVTPVG
TCRIAVQNFRSYAEYSPCRSNILQWQLNISNIPDQRFCEAGWSSVITEAGDILLGAPGSY
FWQGQLFATSNIDMIVKDYQRDQPLRPLGLKKETKDARGKKDNHFEGYSLAMGEFTGDSV
KDYLLGAPRAKHALGSVIIVDSMTMISKQTIAGEQVAAYFGYVVAATDINSDGRDDILVG
APLFMNLGQDGKQREVGRVYVYLQDQLENFKQPTQTITGTDKFGRFGSAITILGDLDSDG
YKDVAIGAPYAGEDGNGRVFIYLGHANGLLSKSYQELKGTWAPGLVSAGFGFSLQGGADI
DANNYTDLIVGAHDVDKVLLYRARPVITADAHIILVPDILNPEEKKCVLSQKSTLVTCLE
VRVCLMVKGHDIGHQYALNGQIELDKNKQRSQRRILFLQSYQAQKNFQFSLTRNKQAACQ
NFTAYLRQETEFKDKLSPIVVTVNCSLSEEQQLGSGKLKPVLSPRSQTWVTKKTRILLDC
GNDGICIPDLKLNATV
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacacttagtcaacttctatttttctttagctgtgtttgatttggacgcaaag
gtctggaaaatgcatgcttgctatttaatggaaattttgtccgtttatctgcttggacta
ttgcaccttcatgcattcaattttgatgcagaaaacccaatcatttattcggggcctgaa
ggaagctattttggattttctgtcgagttctacttgccagatggtgggaatccaggtgtg
ctgattggtgcccccaaggcaaatactacacaagaaaacataatagaaggtggagcagtg
tttctctgtccttggtcaagtaatggaaatcactgcaacataataccattcgacacggag
ggtaaccgacatattcacaatgtcatagaagaaatgaaagattacaaatcccatcaatgg
tttggggctacagtcaaatcactcaaggaccaagttttggcctgtgctccattgtaccac
tggaaatattcacggaccatcaactccaaggtcgagactggtggagtgacgccagtgggc
acgtgccgaatagcagttcaaaacttcaggagctacgcagaatattcaccctgtcgttcc
aatattttgcaatggcagcttaatatatcaaacatcccagatcagcgtttttgtgaagcc
ggctggagcagtgtaatcacggaggcaggagacatactacttggtgcacctggcagctac
ttctggcaaggtcagttatttgctaccagcaacattgacatgattgttaaggattaccaa
cgtgatcagcctctgagaccactaggattaaaaaaagaaacaaaagatgccagagggaaa
aaagataaccattttgaaggttactcactcgctatgggggaatttacaggagactctgtt
aaagattatcttctgggagctcccagggcaaaacacgcattgggatcggtaattattgta
gattctatgaccatgattagcaaacaaactattgccggcgaacaggtagctgcgtatttc
ggctatgtggtggctgccacagatataaacagtgatgggagagacgatatcttagtcgga
gcgcctctatttatgaaccttggacaggatggcaaacagcgtgaggtcgggcgggtttat
gtttatctccaagatcagcttgaaaacttcaagcagccaacacagaccatcacgggaact
gataagtttgggcgctttggcagtgccatcaccatccttggggaccttgactctgatgga
tacaaggatgtggcaatcggagcaccatatgctggtgaagatggcaatggaagagtgttc
atttacctgggccatgctaatggactgctctcaaaatcttaccaagagctgaagggaacc
tgggcccctggtttagtatcagcaggatttggcttctcgctgcaaggaggcgcagatata
gatgcaaataactacaccgatttgattgttggtgctcatgatgttgacaaagttctactg
tacagagcaaggcctgttataacagcagacgcccatatcatacttgtgcctgacattcta
aatccagaagaaaaaaaatgtgtattgtcacagaaatctaccttagtgacatgtcttgaa
gttcgggtttgtttaatggtaaaaggacatgacattggccaccaatatgctttgaatggt
caaatcgagttggacaaaaataagcagcgttcccagcgacgaatccttttcctgcaatca
taccaagcccagaaaaatttccagttttctctgacgagaaataaacaagcagcctgccaa
aatttcactgcctacctcaggcaagaaacggagtttaaagacaagctcagtccgattgtt
gtgactgtgaactgcagtctgtctgaggagcaacagctgggttctggcaaactgaagcca
gtgctgagtccccgcagtcaaacctgggtgactaaaaagactcgcattcttctggactgt
ggaaatgatggaatatgcatcccagatctcaaattaaatgcaacagtgtaa
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