Chiloscyllium plagiosum (whitespotted bambooshark): 122540148
Help
Entry
122540148 CDS
T08871
Symbol
her9
Name
(RefSeq) hairy-related 9 isoform X1
KO
K06054
hairy and enhancer of split 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03460
Fanconi anemia pathway
cpla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
122540148 (her9)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
122540148 (her9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122540148 (her9)
03400 DNA repair and recombination proteins [BR:
cpla03400
]
122540148 (her9)
Transcription factors [BR:
cpla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
122540148 (her9)
DNA repair and recombination proteins [BR:
cpla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
122540148 (her9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NCOA
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
122540148
NCBI-ProteinID:
XP_043531394
LinkDB
All DBs
Position
34:complement(34197512..34199379)
Genome browser
AA seq
305 aa
AA seq
DB search
MPTDTMEKPSISPTVGSSANSPQTPDKPKSASENRKSSKPIMEKRRRARINESLSQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMTAALTADPTVLGKYRAGFNECMNE
VTRFLSTCEGVNTDVRTRLLSHLSSCLGHMVAMNYSQAPSNVASVPGAHLNQPLHVQLPA
TVPASGGVNMPCKLSPAEAASPKVYGGFQLVPATDGHFAFLIPNPAFASSSGQITTGPVI
PLYANANLPVAVSSAAGPPNSKLTSPVQGMTSAVFGPNIPGVSQSHSPLGVSTGPDNSES
VWRPW
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgacaccatggagaaaccttccatttcccccacggttggctcatctgcaaac
tctcctcaaactccggataaacccaaaagtgcgagtgagaacagaaagtcttccaaaccc
attatggaaaagcggcgcagggcaagaattaacgagagtttgagtcaacttaaaaccctg
atcctggatgccctgaaaaaagatagttccaggcattccaaattggaaaaagctgacatc
ctcgaaatgacagtgaaacaccttcgaaatctccaacgtgtacaaatgaccgcagcttta
actgcggatccaacggtcctgggtaaatacagagccggatttaacgagtgtatgaacgaa
gtgactcgcttcctgtcgacctgtgaaggggttaacactgatgttcgcacccggctcctc
agtcacttatccagttgcctgggacacatggtggccatgaattactcgcaggctccatcc
aacgtggcctcggtgccaggagctcacctgaaccagcccctccacgtccagctcccggcc
acggtcccggccagtggcggggtcaacatgccgtgcaaactgagtccggccgaagccgct
tccccgaaggtctacggcggcttccagctggtgcccgccacggacggccacttcgccttc
ctgatcccgaacccggcgttcgcttcgtccagcggacagattacaaccggcccggtcatc
ccgctctacgccaatgctaacctcccggtggccgtcagttcggcagcggggcctcccaac
tccaaactgacatcccccgtccagggaatgacctcggccgtgttcgggcccaacatcccc
ggagtttctcagagccacagcccgctcggagtgagcacgggtccggacaactccgagtct
gtctggagaccttggtga
DBGET
integrated database retrieval system
