Chiloscyllium plagiosum (whitespotted bambooshark): 122540168
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Entry
122540168 CDS
T08871
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpla03400
]
122540168 (apex2)
Enzymes [BR:
cpla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
122540168 (apex2)
DNA repair and recombination proteins [BR:
cpla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
122540168 (apex2)
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Exo_endo_phos2
Motif
Other DBs
NCBI-GeneID:
122540168
NCBI-ProteinID:
XP_043531433
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Position
34:607854..633668
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AA seq
538 aa
AA seq
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MAMVVGEMEGSGLRLVSWNVNGIRARGKRLQSMLQRLGAEIICLQETRVTRELLDEPTAI
VDGFNSYFSYSRHRRGYSGVATFCTDNAVPFAAEEGLSGILANPASNALEGFSDKELKEL
DSEGRALITKHRVRTCEEKEIMLTVINVYCPRADPEMEDRHHYKLRFYQLLEARAQALLQ
DGGNVIVLGDLNTAHRPIDHCQPGDLNQFSEYPDRVWMDKFLSCASDQSQLDEINQNSDS
KPGLGMREKSGYGLFVDTFRFFHPTEKEAYTCWRTSTGARKTNYGTRIDYIFVNKSLAET
ELENCILMPEIEGSDHCPVKVFLKSHCVPATKCPPLCTKYMPEFAGQQQKLSKFLVNIQE
NQSRLDFQNYAETNQNSKLNPQTKKAKLDQRQTGKGLMRKKGKNGRSNSHLSRNLLQFFK
PADTNPASKLKTCDDVGLFNKTALTVTGQQQADSKEIKQDIQIENTQSSSQAVFWKSLLK
GQPPPPNCSGHREPCLLRVVRKPGPNQGRQFYICPRPEGSVSNPESRCNFFRWVNTRN
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggctatggtggtaggagagatggagggctccggcttacggctggtttcctggaacgtg
aacgggatccgggcgcggggtaagcggctgcagtctatgctgcagcgactcggagccgaa
atcatctgtctccaggagacccgagtaacacgggagttactggatgaaccaactgccatt
gttgacggtttcaactcgtatttcagctacagccgacatcgacgtggatactcaggtgtt
gctaccttttgtacagacaatgctgtgccatttgctgcagaagaaggtctgtcaggaatc
ttggccaatcctgcttcaaatgccctggaaggattttcagataaggaattgaaagagttg
gatagtgaaggccgagccttgatcacaaaacatcgagtcagaacatgtgaagagaaggaa
ataatgttgacagtgattaatgtgtactgtccccgtgcggatcctgagatggaggaccgt
caccattacaagttgcgtttctatcaactgttggaggcgagggcacaggctttgctgcag
gacggagggaatgtgattgtcctgggagatctgaacactgcacacaggcccatcgaccac
tgtcaaccaggcgatctgaatcaattcagtgagtatccagatcgtgtgtggatggacaag
ttcctgtcctgtgcctctgatcagtcgcaattagatgaaatcaatcaaaattctgacagc
aaaccaggactgggcatgagagagaagagcgggtatgggctttttgtggatacgttccgt
ttcttccatccaacagagaaagaagcttatacctgttggcgaacaagtacaggagctcgc
aaaacaaactatgggacaaggattgattacatctttgtgaacaaatccctggcagaaact
gaattggagaactgcatcctgatgccggagattgaaggatcagatcattgcccagtcaaa
gtgtttttaaagagccattgtgtcccagccactaaatgtcctccactttgcaccaaatac
atgccagaattcgctggtcaacaacaaaaactttccaaattcctggtaaatattcaggaa
aatcaaagcagattggatttccagaattatgcagaaactaatcagaattctaagttgaat
ccccagacaaaaaaagcgaagctggatcaaagacaaacgggaaaaggtttaatgagaaag
aaaggaaaaaatggtcgaagcaattctcatctctcgagaaatttactgcagtttttcaaa
ccagctgacactaatccagcttccaagttgaaaacatgtgatgatgtgggtctctttaat
aaaactgctctcactgtcactgggcaacagcaagccgatagcaaggaaattaaacaggac
atccagatagagaatacacaaagttcatcacaagctgttttttggaagtcattactgaaa
ggacagcctcctcccccaaactgttctgggcatcgcgaaccatgtctgctacgtgttgtc
aggaaacctgggcctaatcaaggcaggcagttctatatctgtccacgccctgaagggtct
gtctcaaaccctgaatcgagatgtaactttttccgctgggtgaacacaagaaactga
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