Chiloscyllium plagiosum (whitespotted bambooshark): 122540186
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Entry
122540186 CDS
T08871
Symbol
nphp4
Name
(RefSeq) nephrocystin-4
KO
K16478
nephrocystin-4
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cpla03037
]
122540186 (nphp4)
Cilium and associated proteins [BR:
cpla03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
122540186 (nphp4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPHP4_C2_3rd
NPHP4_C2_2nd
Ig_NPHP4_1st
Ig_NPHP4_2nd
Ig_NPHP4_4th
Ig_NPH4_3rd
NPHP4_SK
Motif
Other DBs
NCBI-GeneID:
122540186
NCBI-ProteinID:
XP_043531469
LinkDB
All DBs
Position
34
Genome browser
AA seq
1449 aa
AA seq
DB search
MAAAQWRAPGVWSGVANSDIPPHFQRYAGLVDESEGFQLSLRTLEGLPFKASLLEGVANV
QCQLRLTLFDTTYSHFFGRTWKSSPQPIMHTHGQPAKVLFNQSVYFHTPLNCAHIVIIVE
VVAIAKKREDNERVLSCGFGILHLCGRQKSTPDTAKGQNIKRLSLYHGTPRALLHPKLQD
PIEKNTFMTLIEGSTIFYSFSSHPPLMEASHLIPENMLIAGSETVPGLVAPSKPTSNILK
KPNLMKTVTCYLDKLSLQLYPTLEKFEEELVELINADRLLKNDQVSDGNTVVIQERRLHV
CVHNSWCYVQKPQVVVLIPGTVQGKSRNLSKSSQKTSLVLRSRIQLTEMVKLPMFAIVFH
LEYVFSSSTGADGKLSSSTSSLENTAYMQILRWAVWNPFLGSHASDVTISLHGGPSPNPS
NLLVYKTPSTDMSSEEVKQVESGTISFHFSCRSDKHADSNAELSDSTKSGGALGSQNSSF
RRKTPDASKYPPEQMLSHSQHSSSQYLTTGLPTSRTLLRQVSGHRTSSKMTSIHQLSRSQ
QSSYRYSATSLPLNRTLRRQFSGHRIPSKMQEPRGSIDHIPFDAVESHAIEQLQELPFTP
MQAPILTLMTESERATTVTSRAALAQLHAVGFPEILDDNNELATVIDPDELSNFNLQKEK
ADRLQSNEIILQFLAFSREPEDSSQPGSIYFTFQFYRFSPVTTQQLQLVKLRNSQKKTLK
FTPFILIPLNKNGTGNLDSPGLELKFMVEPSYMKEGEQRRFMQYLATQTLQIDVWDAESL
LLIGTATVELKYLLRQGHTAVQVSHELPVITTEYTPDVPMALANITKHGTVKPYGMTTIT
KGKLHMRLGNVGHHPKRTAKNPIPVPESRIISSQDGTSGFSGGSLSTRSPKKLSALNMYR
AQRMVDLDSELASVLFSRARIDNFGQQDLDSDADILRKRKLRRMMAVRQLESGVDLKSKT
HVLTKHEERKHHERDLQIINAYRERIKSESISRMLSQAITTQYTLYATLGNAEFFEFSLK
NPYSVQHTITIECEHPELSVIVNSREWKYFKNLTKTLTPLEEDMFHVEGGVQSPQLYLRP
KETVYIPFKFQTFSADHSIAPQGPADGKLAKKNIIHQQETNPTTKKIEVSFKIENQKPIA
ILQVNVEAQPYVIDQTFRFYHPEMTFLKKSIRLPPLHTLSGLTVQSPNAELQINVRCSDF
NIICETKKVAHNEPQDVFLKVACGPSPEVKKFFVIVYMDPWVAVPVQIWQFYIHSMQKID
VSCVVGELTQLSLVLRGTQAVRKVAAYTSSPEELQTTPSDVFLLPPHTVKDLHISIRPQK
EGDRCLYLNVVDVDFRQLVASWLVCLSCKQPTICKAFEISIPIGEGRGSNKRISYTNPYP
NKRMFFLWTNRPDLLQYKEDSFELDGGETYHIGLRFAPGQNPGVEEILILINDQAEKNEA
TYCVKITYQ
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgcagtggcgggctccaggtgtttggagtggggtggcaaactctgatatt
cctcctcactttcagcgatatgccggactggtagacgagtcggaagggtttcagctgtcg
ctccggacgttggagggtctgccgtttaaagcgagtttgttggagggagtggcgaatgtc
cagtgccagctccgacttaccctcttcgataccacatattcccatttctttggcagaacc
tggaagagttctccacagcccataatgcacacccatggccagccagccaaagtgttgttc
aatcagagtgtttacttccacacccctctaaactgtgcccacattgtgatcattgtggaa
gtcgtcgcgattgcgaagaagcgtgaagataatgaacgtgtcctgtcatgtgggtttgga
attctgcacttgtgcggtagacagaaatctacaccagatactgctaaaggtcaaaatatt
aaaagattgagtctctatcatggtacgccaagagctttgctgcatccaaagttacaggac
cccattgaaaagaatacatttatgacattgattgaaggaagcactattttttactcattt
tcgtctcatcctccactaatggaagctagtcacctcatcccagaaaacatgttgatcgct
gggtcagaaacagttccagggctggttgcaccttctaaaccaacaagcaacattttgaag
aaacccaatttaatgaagactgtaacttgctacttggacaagctgtcccttcagctttac
ccaacactagagaaatttgaagaggagctggtggaattgattaatgcagaccgactgctt
aagaatgatcaagtttctgatggaaacacggttgtcattcaagaacgaaggctgcatgtt
tgcgtccacaacagctggtgttatgttcagaagccgcaggtagtagttttgatacctggg
acagtgcaaggaaaatccaggaacctctccaaaagttcgcaaaaaacgtccctggtcctc
aggagccgtatccaactgacagaaatggtaaaactgccaatgtttgctatagttttccac
ctggaatatgtgttctccagctccacgggagcagatgggaagttatcctcttctacctct
tctttggaaaatacagcgtacatgcaaatcttacgttgggctgtttggaatccgttcttg
ggatctcatgcttctgatgtaacgatatcacttcatggcggaccttcacccaacccaagt
aatttgctggtttacaaaacaccttccactgacatgagctcagaagaggtaaagcaggtg
gaatcaggcaccatcagttttcatttctcatgccgttcggataagcatgcagacagcaat
gctgagctgagtgattcgacaaaatcaggtggagcgctaggttcgcaaaattcttcattc
cgcagaaaaacccctgacgcttcaaaatatccacctgagcaaatgttatcccattcccag
cattcttcatctcagtacttaactacaggccttcctacgagcagaacattgctgaggcag
gttagtggtcaccgtacatcctcaaaaatgacttcaatccaccagttatcccgttcccag
cagtcttcataccggtactcagctacaagtcttcctctgaacagaactttgcggaggcag
tttagtggtcaccgtataccctcaaaaatgcaggaacctagaggcagcattgatcatata
ccctttgatgctgtagagtcccatgccattgaacagctacaagaattgcctttcacacca
atgcaggcaccaatcctcaccttgatgactgagtctgaacgagctaccactgtgacttca
agagcagctttagcgcagttgcatgctgttggcttccctgagatcctagatgataacaat
gagctggcaacagtgattgaccctgacgaactttcaaactttaatctgcagaaggaaaaa
gcagaccgtcttcaaagcaatgagataattcttcaatttctagccttcagcagagaacct
gaggacagtagtcaaccaggatcaatctacttcaccttccagttttatcgcttctcacca
gtaacaacacagcagctgcaacttgtcaagttgcgcaactcacaaaagaaaactttgaag
tttacaccttttattcttataccactaaacaaaaatggtactggtaatttagattctcca
gggctggagctgaaattcatggtggagccgagttatatgaaggaaggagaacagcgacgg
tttatgcaatatctggccacgcagacattgcagattgatgtctgggatgcagaatcctta
cttctgattggcacagcaactgtggaactgaagtatttgttacgccaaggtcatacagca
gtccaggtttctcacgagctgccagtcataaccacagaatacaccccagatgtaccaatg
gctttggctaatatcaccaagcatggcactgtcaagccttatggaatgacaacaataacg
aagggaaaactacatatgcgactggggaatgttggtcaccaccctaagcggacagcaaag
aatccgattcctgttcctgagtcaaggatcatctcctcacaggatggaaccagtggtttt
tctggtgggagcctgtctacaagaagtccgaaaaaactcagtgctttaaacatgtataga
gcacaacgaatggtagacttggacagtgagctggcttctgtccttttctccagagcacga
attgacaactttggacaacaagatctagatagtgacgcggatatccttcggaaacggaag
ctgcggaggatgatggctgttcgacagctggagtccggtgtcgatcttaaatcgaagacc
cacgttttgactaaacacgaggagcgaaagcaccatgagagagacttgcagatcatcaat
gcgtaccgggagcggattaaatcggaaagtatcagcaggatgttatcccaggccatcacc
acacagtacaccttatatgccacacttggaaatgctgaattttttgaattttctctgaaa
aatccctacagtgttcaacacacaataaccattgagtgcgaacatccagaactcagcgtc
attgtgaacagcagagaatggaaatacttcaagaacctcacaaaaacactgacaccgctg
gaggaggacatgttccatgttgaaggaggagtacagagtcctcagctctacctacgacca
aaggagactgtctacatcccatttaaattccagaccttcagtgctgaccattccattgct
ccacagggtccggcagacgggaaacttgcaaaaaagaatatcattcatcaacaggaaacc
aaccccacaaccaagaaaatcgaagtctctttcaaaattgaaaatcagaagccgattgcc
atccttcaggtgaatgttgaagctcaaccctatgttattgatcaaacatttcgcttttat
caccctgaaatgacattcctgaagaaatcaatccgcctgcctccgttgcacactctatca
ggtctgacagtacagtcaccgaatgctgagcttcagatcaacgttcgctgcagtgatttc
aacatcatttgtgagacaaaaaaagtggcccacaatgagcctcaggatgttttcctgaaa
gtggcgtgtggccccagtccagaggtcaagaagttctttgtcattgtttacatggacccc
tgggtggcagtgcccgtccagatatggcagttctacatacactccatgcaaaagattgat
gtgagctgtgtggtcggggaacttactcaactctcactggttctacgtgggacacaagct
gtccggaaggtcgctgcttatacctcaagtcctgaagagttgcagactacaccctcagat
gtcttcttacttccaccgcacacagtgaaggacctgcacattagtatacgtcctcagaaa
gaaggagatcgctgtctctacctgaatgtagtggatgtcgattttcgccagctggtagcc
tcttggctggtctgcttaagttgtaagcagcccaccatctgtaaggcttttgagatctct
attcccattggggaagggagaggtagcaacaagcgcatcagctacaccaatccctacccg
aacaaacggatgttcttcctgtggaccaaccggccggatttactacaatacaaagaagac
tcttttgagcttgatggtggtgagacttaccatatcggcctgcggtttgcaccaggccag
aatcctggtgtggaagaaatcttgattttaattaatgaccaagctgagaaaaatgaagca
acttattgtgtgaaaattacttatcaataa
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integrated database retrieval system
