Chiloscyllium plagiosum (whitespotted bambooshark): 122540196
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Entry
122540196 CDS
T08871
Symbol
nvl
Name
(RefSeq) nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122540196 (nvl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpla03009
]
122540196 (nvl)
Ribosome biogenesis [BR:
cpla03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
122540196 (nvl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
RuvB_N
AAA_5
AAA_2
AAA_16
AAA_22
NPHP3_N
Mg_chelatase
RNA_helicase
AAA_28
ABC_tran
TIP49
nSTAND3
AAA_14
AAA_17
Rad17
NACHT
AAA_33
AAA_18
IstB_IS21
Vps4_C
TsaE
Zeta_toxin
Parvo_NS1
TSCPD
Motif
Other DBs
NCBI-GeneID:
122540196
NCBI-ProteinID:
XP_043531500
LinkDB
All DBs
Position
3:135929773..135999911
Genome browser
AA seq
848 aa
AA seq
DB search
MRNRGEHLGDPRLKHRVKQYLRNSRDRYVDIGILAADLQRLYSSDYGRRKRNAFRIQVDK
VFQSIRNEMAYLEEEHLVKRARQSRTQDGRGLTSDSSDSEDYPEYPLTNHMNTSLLSLYR
KTNPDPPATPAAKKVSEDGSNHGHEASQTLGQSQGSLQGTELSEDSWFIDKIPGAPRSEA
HLLDEKESKQNPERLEALPVDQGTRKQRRLSKRKRQDREESKDVDAQIESSVLNRKAKKG
FELHHSTVTFEDVGGCEGTLKAVCQLLIHMRHPEVYQQLGVVPPRGFLLHGPPGCGKTLL
AQAIAGVRPICSQKLSSQGCDLAWDCPIPGSGLSGRVPVLLISMSVRTDVILFLLHQLQA
PCIVFIDEIDAISPKREVASKDMERRIVAQLLTCMDDLNNLASTTQVLVIGATNRPDSLD
PALRRAGRFDREICLGIPSEGAREQILRTLCRRLKLPELFDFRQLARLTPGYVGADLMAL
CREAAMHTVNRVLIQQREDSRQADTSQQQTELAEFERLCTLLKDPSPLSEKELQKLHIEM
TDFTDSLSVVQPSAKREGFATVPDVTWADIGALQEIREELSMAILAPIRYPEHFQLLGLS
SPAGLLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARNS
APCVIFFDELDSLCPRRSEHESGASVRVVNQLLTEMDGLETRKQVFIMAATNRPDIIDPA
VLRPGRLDKTLYIGLPKASDRFAILQTLTKFGTHPLLNSDVDLSVIASDQRCDSFSGADL
SALVREASINALRQHLSGQPSEQAPAPSSGIRVARHHFEAAFEKVKPSVSKKDQLMYEML
RQSLSQSL
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacagaggtgaacatctgggagatcctcgactgaagcacagagttaaacagtat
ctccgaaatagcagggatcggtatgtggatattggaattctggctgcagatctccagcgg
ttgtatagctctgattatggccgcaggaagaggaatgccttcaggatccaggtggataaa
gtgtttcaatccatcagaaatgaaatggcatatttggaggaggagcatctggtcaaacgg
gctcgacagagccggacacaggatgggaggggcctgacctctgattcgtctgacagtgag
gattaccccgaatacccgctgaccaatcacatgaacacttcgctgctgagcctatatcgg
aaaaccaacccggaccctcccgccactccagctgccaagaaggtgtcagaggatggcagc
aatcatgggcatgaagcttctcaaacactgggtcagtcacaaggatccctgcaaggtaca
gagctatctgaggacagttggttcattgacaagataccaggagctccccgttcagaagct
catctgcttgatgagaaagaatcaaaacaaaatcctgagagattggaagcgttgccagtg
gatcaaggcacgaggaagcaaaggagactgagtaaaaggaaacggcaagatagagaggag
tcaaaggatgtggatgctcagatagagtcatctgtactgaacagaaaagcaaagaaagga
tttgaactgcatcattcgacagtgacgtttgaggatgtcggtggctgtgaaggaacctta
aaggctgtgtgccagctactgattcacatgaggcatcctgaagtataccagcagctgggt
gtggtaccaccccgaggattcctgttacatggacccccaggctgtgggaagacactgttg
gcacaagctattgctggggtaagacccatctgcagtcagaaactctcatcacagggatgt
gacctcgcctgggattgtcccattccaggttccggtctcagtggcagggttccggtctta
ttgatttcgatgtcagtacgcaccgatgtgatcctgttccttttacaccagctgcaggct
ccctgcatcgttttcattgatgagattgatgccatttctcccaaacgggaagtggcttca
aaagatatggaacgtcggattgtggctcagctgctgacctgcatggacgatctgaataat
ctggccagcaccacacaagtcctggttatcggtgcgaccaaccggccagactcattggac
cctgcactgcgaagagctggacgctttgaccgggagatttgtctgggaattccaagtgag
ggtgcccgtgaacagattttgaggactttgtgtcgaagactgaaacttccggaattgttt
gattttcgccagcttgcccgcctgacccctggctatgtgggtgctgacttgatggctctg
tgtcgggaagcagccatgcacacggttaaccgtgttctgatccagcaacgcgaagacagc
agacaagcagatacttcacagcaacaaacagaactggctgagtttgagaggctgtgtaca
ttgctgaaagatccatcgcctctctctgagaaggagctgcagaaactccacatagagatg
actgatttcactgattcactgtcggtggtccagccctcagccaagcgggaaggatttgcc
actgtgcctgatgtgacttgggctgatataggagctctacaagaaatccgtgaggagctc
tccatggctattctggctccgatccgatacccagagcatttccagcttctgggactgtcc
agcccagctggtctgctattggctggacctccaggctgtgggaagacactgttggccaag
gctgttgcgaatgagtctggactgaatttcatctctgtgaaaggacctgagctgttaaac
atgtacgttggtgagagtgaacgggcagtacggcaagtgttccagcgagctaggaattca
gcaccttgtgtcattttttttgatgaattggactcactctgccctcggagatcagaacat
gagtcaggtgccagtgtgcgtgtggtgaaccagttgctgacagagatggatggcctggag
actcggaagcaggtttttatcatggcagccacaaacagaccagatattattgatcctgct
gtgctgcgacctggccgactggataagacgttatatattggattaccgaaggcctcagac
cgatttgctatcttgcaaactttgacaaagtttgggacccatcccctattgaactctgat
gttgatctgtctgtgattgccagtgaccagcgctgtgacagcttctcgggtgcagacctg
tccgcactggtacgtgaagcttccattaatgccctgagacagcatctgtctggccagccc
tccgaacaagccccagctcccagctcaggaatacgggtggcacgacatcatttcgaagca
gcctttgagaaagtgaagccttccgtgagtaaaaaggaccagttgatgtatgaaatgctg
cgacagtctctcagccagtctttgtga
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