Chiloscyllium plagiosum (whitespotted bambooshark): 122540207
Help
Entry
122540207 CDS
T08871
Symbol
exosc10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122540207 (exosc10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122540207 (exosc10)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
122540207 (exosc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
122540207
NCBI-ProteinID:
XP_043531522
LinkDB
All DBs
Position
34:complement(11566815..11629722)
Genome browser
AA seq
881 aa
AA seq
DB search
MAARGRLAEDPDPGERPLSGDGPIPGFSDADSFVKHVLGTVVSTTKASNGLPQPGDEFDF
YRSFPGFQSFCDTQADRLLSCMSQLMQYHGCRSHIRVRNKVTELEDKFDLLVDANDVILE
QVGILLDEASGVNKNQQPVLPAGLQPPKTIISSWNRKNTEMKKSKSETFRLFHAKNIPRP
QVKFKEKVDNSNTPFVPKLFIKPNALKPLPAVLLNRQSRMERPEDLDVPAALADFIHQQR
MQHSEQDMLAHPYQYELNHFEPSESVLAKTEPQMYKPLSETNFQLITTFDELVELNEKLS
KCKEFAVDLEHHSYRSFLGLTCLIQLSTREEDFVIDTLELRSEMYILNEVFSDPSIVKVF
HGADSDIEWLQRDFGLYVVNMFDTHQAARVLNLGRHSLDYLLKQYCNVQTDKRYQLADWR
LRPLPAEMLQYAQEDTHYLLYIYDKMKNQLWEQGNEQANLIRLVWHKSRDICLKKYCKPI
FTEESYLELYRKQKKQLNTQQLTAFRLFYAWRDSTSRREDESTGYVLPNHMMIKIAEELP
KEPQGIIACCNPIPPLVRHHINELHLLVQQARDMPLLKTESAQLQQKRRTLLKADKTENL
LFGPHDGSHLSGNVQFVHGSVPLIQTSKLFPDLEDGDTSLTLTSAKAIITIFDDSLPNEK
NHETLTTAQQKARTILESFENPFRMYLPSKDSNMYISQAAKFDPSTKIYEVSNRWKLLSQ
EHLQKEATKKQEQTKEAKSTPKPEVVRQQIKQDYIAEVQEIPSVRQQAAMAAEQQSVKRE
RTKSGAGTEAVPPEKKKSKSGTEEPKNPKNIKPFDYSKSDFKVFAAGNKSKESTQFDPNY
EADVPHSKKSGKKNRQSAGNRSMTFPNSKSDRGFKHSWPKR
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgggggagattggcggaggatccggatccgggagagaggcctctcagcggt
gacggccccatcccgggtttcagtgacgcggatagctttgtgaagcatgttttggggaca
gtggtttcaactaccaaagcctccaatgggcttcctcaaccaggtgatgagtttgacttt
taccggagtttccctggatttcaatctttctgtgacacccaagctgatcgtctcctgagc
tgcatgagtcagcttatgcagtatcatggctgtcgaagccacatcagagtccgtaacaaa
gtgacagaactggaggacaaatttgacttgttggtggatgcaaatgatgttattcttgaa
caagttggtattttactggatgaagcttcaggtgtgaacaagaatcagcagccagttctc
ccagcaggacttcaacctccaaagaccatcatctccagctggaaccgcaagaatactgaa
atgaagaaatcaaagtctgaaacgttccgtctgtttcatgcaaaaaacattccacgacct
caggtgaagttcaaagagaaggtcgacaattccaacactccttttgtgccaaagctcttc
atcaaacccaatgccttgaagccactccctgcagttcttttaaacagacaaagtcgaatg
gaacgcccagaggatcttgatgtgccagcagcattggctgactttattcatcagcagaga
atgcagcatagtgagcaggacatgcttgcacatccataccagtatgagctgaatcatttt
gaaccatctgagtctgtacttgctaaaacagaaccacagatgtacaaacctctgtctgag
accaactttcagttaatcacaactttcgatgaattggtggaactgaatgaaaaactctca
aaatgtaaagaatttgcagtggatttggagcaccattcgtatcggagtttcctgggatta
acttgtttaattcagctatcaaccagggaagaggatttcgttatcgacacacttgagctg
cgcagtgaaatgtacattctcaatgaagtcttctctgatccctccattgtcaaggttttc
catggtgccgattcagatatcgaatggttgcagagagatttcgggctatacgttgtcaac
atgtttgatacacaccaagctgcccgagttctcaacctaggccgacattcactggattac
cttttgaaacagtattgtaatgtacaaactgataaacgataccagctagctgactggagg
ctacgaccgttgcctgctgagatgttgcaatatgcccaagaagacactcactatttgttg
tatatttatgacaagatgaagaatcagttatgggagcagggaaatgaacaggcgaacctc
attcgactggtgtggcataagagcagggatatctgtcttaagaaatactgcaagccaatt
ttcacagaagaatcctacctggagctgtatagaaagcagaaaaagcaactgaacacacag
caacttacagcgtttcgattattttatgcctggcgggacagtacttcacggcgtgaggac
gaaagcacgggatatgtgctacccaatcacatgatgatcaaaatagcagaggagctgccg
aaagagcctcaagggatcatagcttgctgcaaccccattcctccattggttcgccatcac
atcaatgaactgcacctcctggtccagcaggcacgtgatatgcctcttctcaagacagaa
tcagcacaactgcaacagaagagaagaaccttgctaaaggcagataaaactgagaacctt
ctgtttggacctcatgatggttcccatttgtcgggcaacgtgcagtttgttcatggctca
gtgccactgatacaaaccagtaaactgttccctgatttggaggatggcgatacgagctta
acactcacctctgccaaagcaattattaccatatttgacgattctcttccaaatgagaag
aaccatgaaacattgacaacagcacaacagaaagcgagaactattttagaatcatttgaa
aatcctttcagaatgtatctgccttccaaggacagtaatatgtacatctcgcaagcagca
aagtttgacccttccaccaagatctacgaagtcagcaacaggtggaagttgctgagccag
gagcacctacagaaagaggccaccaaaaagcaagaacaaaccaaggaagcaaagagcaca
ccaaagcctgaagttgtgcgacaacagataaaacaggattatattgctgaagtacaagag
attccttcagtcagacagcaggctgctatggcagcagaacagcagtcggtgaagagggag
cgaacaaagagtggagcaggaactgaggcagtacctccagaaaagaagaagtcaaaatct
ggaacagaggagccaaaaaatcccaaaaacatcaaaccgttcgattacagcaagtctgat
ttcaaagtttttgcagctggcaacaagtctaaggaatccacacagtttgatcccaattat
gaagcagatgtgcctcattctaagaaaagcggaaagaagaaccgtcaatctgcaggaaac
agaagcatgactttccctaatagcaaatcagacagaggcttcaagcacagttggccaaag
agataa
DBGET
integrated database retrieval system
