Chiloscyllium plagiosum (whitespotted bambooshark): 122540221
Help
Entry
122540221 CDS
T08871
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpla03400
]
122540221 (ap5b1)
DNA repair and recombination proteins [BR:
cpla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
122540221 (ap5b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
122540221
NCBI-ProteinID:
XP_043531546
LinkDB
All DBs
Position
34:complement(14018564..14027808)
Genome browser
AA seq
926 aa
AA seq
DB search
MAVSNSEWSQKVAAFYASPSHFLASTTTENFVYDLLRVLADEKISENVKIQILGIIQEFP
GWLFTSSRVAEQAAESIFSIYSQLPFVPKSVNLKCHLLLSVTTIVIATDHLTSNVKILNN
LMTQLFDAVCDTNDRKYGGHFRPLRVLACDCLREFETCHPGLLSRKLELLHTLQQKEVSP
LHQAYTLLYIQALKNAVRALSGSRDVSDGAIRELLTRNEEIKWKVMEKPQDLLAITTTTD
LTPLPSTIETKELKSSVTLLLEESFLLTPVSQAALFHELIQVVLMVRSLSPAIFRSQLLR
LFGTMDISLMHSMLHMKASFTDSLFSAEDENFLLKRLVCMAQHPLLSNSVKLFYMDCLLH
FPENRPINSNLEENLPVLFTPKMAACLFPTLFNDSSTMMSRLNLVSLMCLDSAEEERGLA
EIFDYLVSLYKLVDANGSRGHTVTFFQAVYIFVSCFHASEMYMSELTQYMVKLYQRHCTL
APHMINLIDSIQHLFEDSKWPVSLGEALRKLIVELPPKQLSPHKLIWHLKVLARVAKEPT
ILQKTTVQFLLNVVQASDLCRQGDWRMGNSVLSVCKSILHHQNVEPIFSDLADLLQHVHA
QFQDIDIQDHAHFYYALLTCLSHEKLAGIVAPGTGNCIRAKARSLSSLMSESADHSISVL
PIKHPVLKLIPVPEEGFSNLGPAGDTTVKDFEEDSLQNYLNQFQNVGFAPTIVMKFHLTF
AEEVDPEYHKIYTVHLCFDLRSTHYEPLSDLHVPCLFLSRNPHVFSLAFKPHLPFPVTLH
TRAVFTREDGSTCCSQLEPVDIGFARLFLALPVPTNWPLEMKARLFNQFWESLLQTGSSQ
SVLSRFCFTTVQRPLSELVNLHFQKYVVSQQSDPESYKVFLFLPPRVHLLLSLEQAHDMA
KVDIVTDNWQLLPFINAYLIDITSEK
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgtcaaattctgaatggtcccagaaagtagcagcattctatgccagtccgtca
cattttcttgccagcacaacaactgagaactttgtttacgatctcctgagggtcctggca
gatgagaagatcagtgaaaacgtaaagatacagattctcgggataattcaggaattccca
ggatggctgttcaccagctctcgggtggctgagcaggcagcagagtcaatcttcagcatc
tactcacagctgccctttgtacccaagtcggtcaatctgaaatgccacttgctgctttca
gtcaccactatagtcattgccactgatcacctgaccagcaatgtgaaaatattgaacaat
ctgatgacccaactgtttgatgcagtgtgtgacactaatgatcgcaaatacgggggacat
ttcaggcccctcagggtcctagcgtgcgactgccttcgagaatttgaaacatgtcaccca
gggctcctgtcaagaaaactggaacttctgcacaccctccagcaaaaggaagtcagtccg
ctgcaccaggcctacacgctgctgtatatccaagcgttgaaaaatgcagtccgcgcactc
tcggggtcgcgcgatgtgtcagatggagccatccgagaattgttgacaaggaacgaggaa
atcaaatggaaggtgatggaaaagccacaggatttattagccatcaccacaaccaccgat
ctgactccattaccgtcgaccattgagacaaaggagttgaagtcttcagtgactctgctg
ttggaggagtccttccttctaactccagtatcccaagctgctttgtttcacgaattgatc
caggtggtccttatggtgcgctcgctttctccagccattttccgatcccagttactgcgt
ttgtttgggacaatggatatctccttgatgcacagcatgctgcacatgaaggccagcttc
actgatagtctcttcagtgccgaggatgagaacttcctgttgaagcgtctggtctgcatg
gcccagcatccactgctcagcaattctgtcaagctcttctacatggactgcttgcttcac
tttcctgaaaaccgccccattaactctaacctggaagagaatcttccagttttgttcacg
ccaaagatggcggcttgccttttccccacactttttaacgacagcagcacaatgatgtct
cgtctcaacctggtgagtcttatgtgccttgacagtgctgaggaggaaagaggacttgct
gagatctttgactaccttgtgtccttatacaaactggtggatgccaatggaagccgagga
catactgtgacgtttttccaagccgtgtacatatttgtgagttgcttccatgccagtgaa
atgtatatgtcggagctgactcaatatatggttaagctgtaccagaggcattgcacctta
gctccacacatgattaatctcatagacagcattcagcacctctttgaggattccaaatgg
cctgtttcactgggggaggctttgcgcaagctgattgtggaactcccaccaaagcaactg
tctcctcataaactcatatggcacctcaaggtcctagcaagagtggccaaggaacccacc
atattgcaaaagacaacagttcagtttttactgaatgttgttcaagcttccgacctgtgc
aggcagggtgattggagaatgggtaactcagtgctgtcagtgtgcaaaagcattctgcat
caccagaacgtggagcccatcttcagtgaccttgcagacctcctgcagcacgttcatgcc
cagttccaggacattgacattcaggaccatgcccatttctattatgccttactcacctgc
ctctcccacgagaagctcgcaggaatcgtggcaccggggacagggaactgtattcgggca
aaggcgcgatcactctcatccctaatgtcagagagtgcagatcactccatctctgttctt
ccaataaaacaccccgtactgaaactcattccagtcccagaagaaggcttttccaatctc
ggtcctgccggagacacaaccgtgaaggactttgaagaagattccttacagaactacttg
aaccaattccaaaatgtcggatttgctcctactattgtgatgaaattccatttgactttt
gctgaggaagtcgatcctgagtatcacaaaatctacactgtgcatctctgttttgacctg
aggagtacccactacgagccactgagtgatctccatgtaccctgtctcttcctaagcaga
aaccctcatgttttctccttggctttcaagccgcatctaccttttcccgtcactttacac
acgagagcagtctttaccagggaggacggcagtacgtgttgtagccagcttgaacctgtt
gacatcggtttcgcccgtttgttcctggcccttcccgttccgacaaattggccgctggaa
atgaaggctcgactctttaaccagttctgggaatccttgctccagactggatccagccag
tctgttctcagtcgcttctgctttacgacagttcagagaccgctgagtgaactcgtaaac
ctgcactttcaaaaatatgtggtttcgcagcagtcagacccagagtcttacaaggttttt
ctgttcctaccccctcgagtccaccttttgctcagtctggagcaggcgcacgatatggca
aaggttgatattgtcactgataactggcagcttttacctttcattaatgcttacctgatt
gacataacgtctgaaaaatag
DBGET
integrated database retrieval system
