Chiloscyllium plagiosum (whitespotted bambooshark): 122540241
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Entry
122540241 CDS
T08871
Symbol
prdm2b
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla00310
Lysine degradation
cpla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
122540241 (prdm2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122540241 (prdm2b)
03036 Chromosome and associated proteins [BR:
cpla03036
]
122540241 (prdm2b)
Enzymes [BR:
cpla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
122540241 (prdm2b)
Transcription factors [BR:
cpla03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
122540241 (prdm2b)
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
122540241 (prdm2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-C2H2_6
SET
zf-C2HE
ZNF428
zf-C2H2_11
zf-H2C2_2
DUF8352
zf-C2H2_ZNF462_1st
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
122540241
NCBI-ProteinID:
XP_043531585
LinkDB
All DBs
Position
34:17298845..17471666
Genome browser
AA seq
1535 aa
AA seq
DB search
MEESDPLTAPEIEMLADVPQRVLKGLPQEVTLKPSAVDEKRLGVWATRSIQKGRKYGPFS
GERKKKSQVKNNVYMWEHTKEHRKVYFPQFGWMCIDATDPSKGNWLRYVNWARSSDEQNL
FPLEINRAIYYKVFKPIQPGEELLVWYNGEDNPDIAAALEEERSTILNRRSSPRGRKGRR
KVRRQKFGIEEGFKGGKTKIASNIVVTLEGENTAGSEKDEPCAPIAHSQEERVVIHQIVT
QKILPQLKYPQMSLEPEAMAEENDSIENLPKKKISVKSLKQKSKSDQNGMGDIEETHMFP
CKNCERRFTTKQGLERHQHIHISTEGFTFKCRYCGKAFGTHINMRRHERRHEAGPKKKAT
LKINMAGQLQKDDFDFDKTAIDISVNSSTRLESPVALETYKKTDSEATPQNLESSLVKSC
ESKIQHPCKLCKKTFGSYTNLRRHQRRIHERHLFKGIRMRRKGSPDEQDPTSDQTRSSSG
FHIASTETEDEEDEEDEEETDECQAYIMDVSSNISENLNFYIDGKIESNNSTSNCEVIEV
DTTCPNPFGLSSVLFPMTDESPQNLKTTTQVPVIHTVLKESADNDLKGPKKRRTTSPLPF
TKTKTELGIETISPVVSSFCGLPLLGQTTNNLSGHQEKNTLSSKLKQLLQIQENSSPRST
LFPDSSVGPSTSTAPTMGLSRFKRRTSSPPNSPQHSPALSSTGKDTDFLRVWSESLPGLK
APKIESQSSSPAWSLSSRDETLSPLSLEMCKITASKEYAPSRLPCTHLPLDLSSGIKLQH
DVKTELEGPGVTILDLSLHKKLCSDSEVKEDTGSVCTPVSCSSKKKKPTTSMLEKVLMNE
YNGTDLTMINKQDTDCSPQPQLEVETPPHPDITPNPVTTPAPSPPPPVLSVPSPLPESVT
QVLQSVTPALSPVGINVKEEIKDVGYPDTDSEQVLNCILPPTIEPESLQDVLIKNSTDDQ
SAENVQSSVQEAKSETTFTKSFQCNVCETSFHSIKELTQHLLVHAEEWPFKCEFCVQLFN
EANALSEHRSSLHGVGKIFVCSVCKKEFAFLCNLQHHQRDLHPDQQCTHVELENGMLRPQ
NYTDPGKATSCSSQSIEESSTLPSHEVEEDDDDSNDLTEELYTTIKVMASGIKPKGPDVR
MGLNQRYPSFKPPPFQYHNRNPTSTVSSAVNFTTHNIPQTFSTAIHCTKCGKSFDNMPAL
HKHILACASASDKKRYTPKKNAIPLKKKVWKKNGAIAAEPARQSTIRRMGQPKRLNFEVE
TKPKVTMNKIKMNALKNKKNKLVQKAISQKNRSSAKEKAILKNRSSESHNCPYCEKEFTY
LGSLNKHVTYSCPKKPASPPSKGSSSHSPASSDKGGGQRRRTADTEIKLQSTPVLLGKRR
GRMLGSLQAESVSLAPRLQQRMRSVPPVKSKKPSTSPIISRTTSPVRPMKVSPVEGKRLK
SDSRQRSSANSGFTSPRLYLRMKNKKVVWQRKTNVMKQKRSEKYLGKTKETRTGAVTRSG
APGVTDSNDSELEDDQENHGSSSDDVQVYAVKMVR
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaagcgatccattaactgcacctgaaattgagatgttagctgatgtgcctcag
cgtgtgttgaagggacttcctcaagaggtgactttaaaaccatcagcagttgatgagaaa
cgcttaggtgtgtgggccacaaggtccattcagaaaggcagaaaatatggtccattctca
ggagaaaggaagaaaaagtcccaggtcaagaataatgtatatatgtgggagcatacaaag
gaacaccgaaaggtttacttcccccaattcgggtggatgtgtattgatgccacagatcca
agcaaaggcaactggttgcggtacgtgaactgggctcgctcctccgatgagcagaacctc
ttccctctggagatcaacagggctatctactacaaagtgttcaagcctatccagccaggg
gaagaactgttggtgtggtacaatggggaagacaacccagacattgcagctgctctagag
gaagagagaagtactattctcaacaggaggagctctcccagaggcaggaaaggaagaaga
aaagttcgaagacagaaatttggaattgaggaaggattcaaaggaggaaaaaccaaaatt
gcttctaatattgtggtaacgctggagggagaaaacacagcgggttcggagaaggatgaa
ccttgtgcccctatagcccattcacaagaggagagagtagtgattcaccaaatagttact
cagaagattctgcctcagctgaagtatccacaaatgtctcttgagccagaagcaatggca
gaagagaatgattctattgagaatctccccaaaaagaaaatttctgttaaatcgctgaag
cagaaatcaaaaagcgatcagaatggaatgggagacattgaagaaacccatatgtttcct
tgtaaaaattgtgagcgcagatttaccacaaaacaaggtctggaacgtcaccagcacatt
cacatatcaacagaaggattcacgttcaaatgcaggtattgtggtaaagccttcggcacc
catatcaacatgagacgtcatgagcgacgccatgaagctgggcctaagaagaaagccact
ttgaaaattaatatggctggacaactccaaaaggacgattttgattttgataaaacagca
attgacatcagtgttaattcttcaactcgactggaaagtcctgtagctctggaaacttat
aagaaaactgattctgaagcaacaccccaaaacctggaaagttctcttgtcaagagctgt
gaatcaaaaattcagcacccatgcaaattgtgcaaaaagacgtttggttcttacacaaac
ttgcgtcgccatcaacgacgtatccatgagcgtcacctctttaagggtattagaatgaga
cggaaaggctctccagacgagcaggacccgacatcagaccaaaccaggtcatcttctgga
tttcatattgctagcacagaaactgaagacgaagaggatgaggaggatgaagaggagact
gatgagtgtcaagcatacattatggatgtttccagtaacatctctgaaaacttgaacttt
tacattgatggcaaaattgaatcaaacaacagcaccagtaattgtgaagttattgaagtt
gacaccacttgcccaaatccatttggactgtcttcagtgctttttccaatgactgatgaa
tctcctcagaaccttaaaacaacaacacaagtaccagtaatccacactgttctaaaagaa
tcagcagacaatgacttgaaaggtcctaaaaagaggcgaaccactagccctctaccattt
acaaaaactaaaacagaattaggcattgaaactatatcacctgttgtctcctcattttgt
ggtctgcctcttcttggtcagaccactaacaatttaagtgggcatcaggagaagaataca
ttgtcctcaaaactcaagcagctgcttcaaatacaggaaaacagttcacccaggtcaact
ctgtttccagacagttcagttggtccttcaacatcgacggcacccacaatgggattaagt
cgattcaagaggagaacaagttcaccaccgaattctccacagcatagtccagcattgagc
agcaccggaaaggacacagactttttaagggtatggagtgaaagtttacctggtctaaaa
gcaccaaaaattgaaagccagagtagttcacctgcttggagtctatccagccgagatgaa
actctcagcccgttgagccttgaaatgtgcaaaataacagcttctaaagaatatgcacca
agccggcttccctgcacacatttgccgctagatctatccagtggcataaaactgcaacat
gatgtaaaaacggaactagaaggacctggggtaaccatcttagacttgagtttgcacaaa
aaattgtgcagtgacagtgaagtcaaagaggatacagggagtgtttgtactccagtctca
tgcagcagtaaaaagaagaaacctacaacctctatgttagagaaggtacttatgaatgaa
tataatggcacagatctaacaatgatcaataaacaagatacagactgcagtcctcagccg
caactagaggtagagacaccacctcatcctgacataaccccaaatccagtaacaacccct
gctccttctcctccaccgcctgtcctttctgtaccttcacctcttccagagtcagttacc
caagttttacagtcagtaacccctgctttgtcaccagtaggtataaatgttaaggaagaa
attaaagacgttggctatccagacactgatagtgagcaagtattgaattgtattcttcca
cccacaattgaaccagaatcgctccaagatgtactcattaaaaactctactgatgatcag
agtgcagaaaatgttcagtcctcagtacaagaggcgaaatctgaaacgacatttaccaaa
agctttcagtgcaatgtctgtgaaacttctttccattccatcaaggaactaacccaacat
ttgttggttcatgctgaagaatggcccttcaaatgtgagttttgtgtgcaactttttaat
gaagctaatgcattgtctgagcatcggtcatctttgcatggcgtaggcaagattttcgtg
tgttctgtctgcaagaaagagtttgcgttcctttgcaatttacagcatcatcagcgtgac
ctacatcctgaccagcagtgcacacacgtagagctggaaaatggaatgctgaggcctcaa
aattacactgatccaggcaaagccaccagctgttcaagccagtcaatagaagaaagttct
acattgccatctcatgaggtggaggaagatgatgatgattccaatgatttaacagaggaa
ttgtatactaccattaaggtaatggcatccgggataaagccaaaaggccctgatgtccgt
atgggtctcaatcaacgctatccgagctttaagcctcctccatttcaatatcataaccgt
aatcctaccagcacagtgtcatcggctgtaaactttactacacacaatattcctcagacc
tttagtacagccatccactgtacaaagtgtggcaagagctttgataacatgccagcattg
cataaacatatcctggcttgtgcatctgctagtgacaagaaacgctacaccccaaagaaa
aatgcaatcccactgaaaaagaaagtgtggaagaaaaatggggcaattgctgcagagcca
gccaggcagagcaccattcggagaatggggcaaccgaaacggctcaattttgaagtggag
acgaagccaaaagtgaccatgaacaagatcaaaatgaatgctctaaagaataaaaaaaac
aaattggtgcagaaggcaatctcacagaagaaccgttcatctgccaaggagaaggccata
ttgaaaaacaggagctcggaaagccacaattgtccttactgtgagaaagaatttacttat
ctaggaagcctcaataaacatgttacctacagttgccccaagaaaccagcatcccctccc
tcaaaagggtctagttcccactcccctgccagcagtgacaaaggaggtggccaacgtagg
aggacagcagacacggaaatcaagctgcaaagtacgccagttcttttaggaaaaaggaga
ggaagaatgctgggatcattgcaagcagagtctgtttccttagcaccaaggttgcagcag
cgaatgagatctgtacctccagtaaaatcaaagaagccaagcacatcacctattatctcc
agaactacaagcccagtaagaccaatgaaagtgtcaccagtagagggaaagcggttaaaa
tctgattccaggcaacggtcttctgccaactctggcttcacttcaccaaggctgtatctc
cgaatgaagaataaaaaagttgtttggcagaggaaaacaaatgtaatgaagcaaaaaaga
tcagagaagtacttggggaaaacaaaggaaactcgaacaggtgctgttacaagaagtggg
gctcctggagttactgatagcaatgatagtgaattggaagatgaccaggagaaccatgga
tcgtcatcagatgatgttcaggtttatgcagtgaagatggtgaggtaa
DBGET
integrated database retrieval system
