Chiloscyllium plagiosum (whitespotted bambooshark): 122540365
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Entry
122540365 CDS
T08871
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5-like
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122540365
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122540365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
ResIII
PHD-1st_NSD
HDA2-3
PHDvar_NSD
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
122540365
NCBI-ProteinID:
XP_043531919
LinkDB
All DBs
Position
34:26112855..26180994
Genome browser
AA seq
1504 aa
AA seq
DB search
MMPASFGNEEDGMENDEGAPEEEEEEEEEEEEEEECREVMFSEEEPAKVKKKRKPRKQKE
NKTPKMKKRKKEEQKSSTYLMDDWGLEDVDYEFTEQDYHTLTNYKTFSQFLRPLIAKKNP
KIPMSKMMTVLGAKWREFSANNPFKGTSVAAAEAAAAAVAAAVEQVIVAPPVPIPLPPPI
QPPVPLRKAKTKEGKGPGVRKKSKSARAAELKKKGKGKKMTPLKIKFGGFSGKRKKGSSS
EEDDHGESDLDSASVHSCSLRPDGSAGFGKRRRKGGKRKKRLEEGDGYETDHQDYCEVCQ
QGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCLHCEKEGIQWEPKEDDEDEEDDEGVE
EEDDDHMEFCRVCKDGGELLCCDSCPSSYHIHCLNPPLPEIPNGEWVCPRCLCTPLKGKV
QRILHWTWGSPPPPRTPPALMGEVNEAEQPKALKGRPEREFFVKWVGLSYWHCSWATELQ
LELYHTVMFRNFQRKNDMDEPPPFDYGSGDDEEKSEKRKSKDPQFALMEQQYYRYGIKPE
WLIVHRIINHSFDKKGDLHYLVKWRDLPYDQATWEFEEFDIPDYDTTKELYWNHRQLILG
DDLRPVRKPKKGRKARELIFDPPPVQPIVDPTVKFDKQPEYIDATGGNLHPYQLEGLNWL
RFSWAQGTDTILADEMGLGKTVQTIVFLYSLFKEGHSKGPFLVSAPLSTIINWEREFTLW
APCFYVVTYTGDKDCRAVIRENEFCFDDNVIKSGKKTFRMKSEAQIKFHVLLTSYELITI
DQTILGSIDWACLVVDEAHRLKNNQSKYFRVLNAYKIDYKLLLTGTPLQNNLEELFHLLN
FLTPQRFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPSKTELIVRVE
LSSMQKKYYKFILTKNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAGEAPVLPN
GSYDGNSLVKSSGKLILLQKMLKKLHSHGHRVLIFSQMTKMLDLLEDFLEYDGYKYERID
GSITGNQRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAF
SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVVRPGLGSKSGSLSKQELDD
ILKFGTEELFKDDEAEKEAEEMRMIHYDDRAISKLLDRNQNATDDADIQNMNEYLSSFKV
AQYVVREEDEQEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVN
YNDASQEDQEWQDDLSDNQSEYSVGSEDEDEDFEEKPEAGRRQSRRQLKSERDKPLPPLL
ARVGGNIEVLGFNARQRKAFVNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFM
RHLCEPGADGSETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEYINGRYSTPEMVPE
HLENKKPVDSISSDPNTPVAASPACPLLSTPAASSTGGFQRGMLCLSVRGYNCAECWDRL
KRDQ
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atgatgccggcatcgtttggcaatgaggaggacgggatggaaaacgatgagggagcccca
gaggaagaggaggaagaagaggaggaggaagaggaggaagaagaatgtcgtgaagtaatg
ttttccgaagaagagccagccaaagtgaagaaaaaaaggaaaccacggaaacagaaagag
aacaagacgcccaaaatgaagaagcgaaagaaagaggaacagaagtcctccacatactta
atggatgattggggtttggaagatgtggattatgaattcacagagcaagattaccacact
ctgaccaactacaaaaccttcagtcagttcctgaggccactcattgccaagaagaatccg
aaaatcccgatgtccaaaatgatgacggtgctcggtgccaaatggagggagttcagcgcc
aacaatcctttcaaagggacctctgtggctgcggcagaggcagcggcagccgcggtggcg
gcagcagtggagcaggtgatcgtggcaccaccggtaccgattcctctgccaccccctatt
cagccccccgtgcccctaaggaaagccaagaccaaagaagggaaaggtccaggagttcgg
aagaaaagtaaaagtgctcgagcggctgagttgaagaagaaaggaaaagggaagaagatg
acacctctgaagatcaagttcggaggtttcagtggcaaacggaaaaaagggtcttcgagt
gaggaagatgatcacggtgagtcggatctagacagcgcgagtgtccacagctgctccttg
cggcctgacggctctgctggttttggcaagagaagaaggaaaggtggcaagaggaagaaa
agattggaggagggtgatgggtatgagacggatcatcaggactactgtgaagtgtgccag
caaggaggggagattattttgtgtgacacctgtcctcgggcctatcacttggtctgtctg
gacccagagctggagaaggcccccgagggaaagtggagttgtttgcactgtgaaaaggaa
ggaatccagtgggagcctaaagaagatgatgaagatgaagaggacgatgagggagtggaa
gaggaagatgatgatcacatggaattttgcagagtctgcaaggatggaggcgagctgctg
tgttgtgactcctgtccttcctcttatcacattcactgccttaaccctccactccctgag
atcccaaatggagagtgggtttgtccacgttgcttgtgcacacctctaaaaggcaaagtg
cagcgaatcttgcactggacatggggttcgcccccaccaccacgtacccccccagctctg
atgggtgaagtcaatgaagccgaacagcccaaggccctgaaaggacgaccagagcgagaa
ttctttgtgaaatgggtgggactgtcatactggcattgctcttgggccacagaattgcag
ctggagctataccacactgtaatgttccggaacttccaaaggaagaacgatatggatgaa
ccaccaccatttgactatggctctggggatgatgaagagaagagtgagaaacggaagagt
aaggacccacagtttgcactgatggagcagcagtattatcgatatgggatcaaacctgag
tggctcattgttcaccgtatcatcaaccacagctttgataaaaagggtgatttgcactat
ttagttaagtggcgggatctgccgtatgaccaggctacgtgggaatttgaagagtttgat
attccagattatgacactacgaaggagttgtattggaatcacagacaattaattttggga
gatgatttaagaccagtgagaaaaccgaaaaaaggacgtaaagccagggaattgatcttc
gacccgcctccagtacagcccatagtcgatccaactgtgaagtttgacaagcaaccagag
tacattgatgccacaggtggcaacctccacccttaccaactggaggggctgaactggctg
cgtttctcttgggctcagggcactgatacaattttggctgatgagatgggattggggaaa
accgttcaaacgattgtatttctatactctctgtttaaagagggtcactccaaaggacct
ttcctggtgagtgctccattgtccaccattattaactgggaacgggagttcacgctgtgg
gcaccatgtttctacgtggtgacttacacaggagacaaagactgcagagctgtcatccga
gagaatgagttttgctttgatgataacgtaatcaagagtgggaaaaaaaccttcaggatg
aagagcgaggcgcaaataaagtttcacgtgctgctgacttcgtatgagttgatcaccatt
gatcagacgatcttgggatccattgactgggcatgtcttgttgtcgatgaagctcacagg
ctgaaaaacaaccaatccaaatattttagggtgctaaatgcttacaagattgattacaag
ctgctgctgactgggacgccactacagaataatctggaggagcttttccacttgctgaac
ttccttactcctcaacgttttaacaacttagaaggcttcttggaggagtttgcagacatc
tcaaaggaggaccagattaagaagcttcatgacctcctgggcccacatatgttgaggcgt
ctcaaggctgatgtctttaagaacatgccatcaaagaccgagctgatagtccgtgtggag
ctcagctccatgcagaagaaatattacaaattcatcctgaccaagaatttcgaggctctg
aattcaaaagggggtgggaaccaggtgtccctgctgaacatcatgatggatctgaagaag
tgttgtaaccatccctatttatttccggtcgcagcaggggaagctccggttttaccaaat
ggatcatatgatgggaactctctggtgaagtcctcagggaagctgatactactacagaag
atgctgaagaaactgcacagccacggccacagagtgttgatcttctctcagatgactaaa
atgctggatctgctggaagatttcctggaatatgatggatacaagtacgaacggatagat
gggagcatcacaggcaaccagagacaagaggctattgacaggtttaatgcccctggagcc
cagcaattctgtttccttctctccactcgagctgggggtctgggcattaacctggctact
gcagacactgttataatctatgattcagattggaacccccacaatgatattcaggccttc
agcagagctcatcgtatcggtcagaacaaaaaggtgatgatctatcgctttgtgaccaga
gcgtcagtggaggaacgcatcacgcaagtcgccaagaaaaagatgatgttgactcacctg
gtggtccggccaggcttgggttccaagtcaggctcactttccaaacaggagttggatgat
attctcaagtttggcacagaggagctcttcaaggatgatgaagctgagaaggaggctgag
gaaatgaggatgatacactatgatgaccgtgccatctccaagctgctggaccgtaaccag
aatgccacagatgatgctgacattcagaacatgaacgagtatctcagctcctttaaagtt
gctcagtacgtggtgcgggaggaagatgagcaggaggaagttgagagagagatcattaaa
caggaagagaatgtggaccctgattactgggaaaagcttctccgacatcattatgaacag
caacaagaggacctggccaggaacctgggcaaaggcaaacgcattcgtaaacaagtcaac
tacaacgatgcttcccaagaggatcaagagtggcaagatgacctttcggacaatcagtct
gagtactctgtagggtcagaagatgaggatgaagactttgaggagaagcctgaagctggg
aggagacagtcacggagacagcttaagtccgaaagagacaaacccctcccacccttactg
gcacgggttggtgggaacattgaggttcttggattcaatgctcgccaacgtaaagctttt
gttaatgccatcatgcgctgggggatgcctccccaggatgccttcaactctcactggctt
gtccgagatctccggggcaagagtgagaaggagttcagggcctacgtgtcactgtttatg
agacacctgtgtgaaccaggagctgatggatctgagaccttcgcagacggtgtccctcgg
gaggggctgtcccggcaacacgtgctcaccaggataggcgtgatgtcactagtgcgaaag
aaggtgcaggagtttgaatacatcaatggcaggtacagcactccggagatggtgccggag
cacctggaaaacaagaaacctgttgacagtatctcgtcggatcccaataccccagtggca
gccagccctgcctgccccctgctcagtacaccagccgcgagttccacaggtgggttccaa
aggggcatgctctgcctttctgtacgtggctacaattgtgctgaatgttgggacaggctc
aaacgggatcaatga
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integrated database retrieval system
