Chiloscyllium plagiosum (whitespotted bambooshark): 122540386
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Entry
122540386 CDS
T08871
Symbol
prdm16
Name
(RefSeq) histone-lysine N-methyltransferase PRDM16 isoform X1
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla00310
Lysine degradation
cpla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
122540386 (prdm16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122540386 (prdm16)
03036 Chromosome and associated proteins [BR:
cpla03036
]
122540386 (prdm16)
Enzymes [BR:
cpla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
122540386 (prdm16)
Transcription factors [BR:
cpla03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
122540386 (prdm16)
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
122540386 (prdm16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
PRDM2_PR
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_11
SET
zf-met
zf-H2C2_5
zf-BED
zf-C2H2_8
zf-C2H2_ZN142
Motif
Other DBs
NCBI-GeneID:
122540386
NCBI-ProteinID:
XP_043531985
LinkDB
All DBs
Position
34:complement(30097712..30814620)
Genome browser
AA seq
1269 aa
AA seq
DB search
MRSKARARKLAKSDSEVVDNMYETDAEPPAGESGEEETEDSIMSPIPVGPPSPLPPSNEF
TPKEGSPYEAPVYIPEDIPIPPDFELRESSVPGAGLGIWAKKKNEVGERFGPYAGIQRVT
LKDPNFGWEIVDELGNVKFCIDASQAGSGNWLKYIRSARSYNQQNLIACQINDQIYYKVI
KEVKSGEELLVFMKDGVYPDGTMPPNLDDEQRYRCGDCDELFRSKVALRRHQAYACNNVN
AIFTTINEEFKQSQLGDGPLHECKDCDRIFPNEYSLEQHMIIHSEEREYKCDQCPKAFNW
KSNLIRHQMSHDSGKRFECENCDKVRLKVFTDPSNLQRHIRSQHVGARAHACPDCGKTFA
TSSGLKQHKHIHSSIKPFTYRRQGQAWTQSDGEVCHKSYTQFSNLCRHKRMHADCRTQIK
CKDCGQMFSTTSSLNKHRRFCEGKNHYNPSSMFPQGLPLTPSAMLDKSKPTSTLNHTSLG
FNDYFPSRPHPTGLPFSPPAAFPSLAPGFPGLFPHSLYPRPPLLPSNPLLKGCLNHDMDG
TVQSPMGTPSVSQASSLVSTFNDRVGPLEEKSNIRPENCYTEKSKGKNSDLSEGSDFEDV
NTTSGTDLDTTTGTGSDLDSDVESDRDKKKEKTNLTAKAADKVSTNSTNEINERTYLPSQ
HSFFPPPDEQNLPTSAANDSIKAIASIAEKYFGTGFMGMQEKKMGSLPYHSMFPFQLLPN
IPHSIYPFTDRNLNPNLLVKNEPKSPREHQKSGSASSESPFDLTTKRKEAKPHPTSKLMA
SALPGEEQPLDLSISSRSRVSQNGPGEPRKNHVFGDRKMTISDEMPKMSHQQPFHYAKPS
PFFMDPIYSWNHLHYTARVEKRKMMDPLNSLKEKYLRPNPLLFHPQMAAMETMTEKLESF
GTLKLDTMGTLQPPPHHSFNFRSPPSTLSDAILRKGKERYTCRYCGKIFPRSANLTRHLR
THTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHE
NESIPVSQHSGVSSNHLGTTASSPNSELDNTALLEEKEESYFSEIRNFIGNNDLSQASSS
ADKRHEAQSGHQEPDHPLTNQKAEEADDEDDEEELEEDDEEEDESMTEKSQDDPVSPKTD
ARVQYRENEEEHHAPLTLGYEQAHRCIAEDEAGLLALDQIANFTKGLDLRKAAEEQYEVK
EAAVFNSTLDSEAIKETLYRQAKTQTYAMMLSFSENASLHPSSQNSLDAWLNIAGATPES
GTFHQINHV
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgagatccaaggcgagggcgagaaaactggccaaaagtgacagtgaggtggtagataac
atgtatgagacagatgctgagccaccagctggggagagtggtgaagaggaaacggaagac
agcatcatgtcccccatccctgtcggcccaccatctccacttcccccaagcaatgaattc
actccaaaggaagggtccccatatgaagcccctgtctacattcctgaagacattccaatc
ccacctgacttcgagctgagagagtcttcagtccctggagcaggattagggatttgggcc
aagaagaagaatgaagtaggagagagattcggtccctatgctgggattcaaagggtgaca
ctgaaggatccgaacttcggatgggagattgttgacgagctggggaatgtaaaattctgc
attgatgcaagtcaggctggaagtgggaactggctcaagtacatccgatcggcacgttcc
tataaccaacaaaatttaatagcatgtcagattaatgatcagatttactataaagtaatt
aaagaggttaaatcgggtgaagagctgctggtttttatgaaggacggcgtctatcctgat
gggacaatgccaccaaaccttgatgacgaacagcgataccgatgtggagactgcgacgag
ctcttccgctcgaaagtggcattgcggcggcaccaggcctatgcctgcaacaacgttaat
gccatcttcaccaccatcaacgaagagttcaagcagagccagctgggtgacgggccactt
cacgagtgtaaagactgcgaccggatattccccaacgagtacagcctggaacaacacatg
atcattcacagtgaggaacgcgagtataagtgtgaccaatgtccgaaagccttcaactgg
aaatccaatctgattcgccatcaaatgtcacatgatagtggcaaacgctttgaatgtgaa
aattgtgataaggtaaggttgaaggtcttcactgatccaagcaatctccagcgacatatc
aggtctcagcatgtgggagcccgggcacacgcttgccctgactgtggaaaaacctttgcc
acctcgtctggattaaagcagcacaagcacatacacagcagcattaagcctttcacctat
aggaggcagggacaagcatggacacagagtgatggtgaggtttgtcacaaatcgtacacc
caattctccaacctttgtcgacataaacggatgcatgccgactgccggacgcaaataaag
tgtaaagactgcggccagatgttcagcacaacctcttcattgaacaagcaccgcaggttc
tgtgagggcaagaaccattacaatcccagttctatgtttccacaaggtctgccacttact
cccagtgccatgctggacaaatcgaaacctacatccacccttaaccatacttcactagga
ttcaatgattacttcccttcacgcccacaccctacgggattgcctttctcaccacctgct
gcatttccttcccttgctccaggtttccctggccttttcccccattccttgtatcccagg
ccccctctattgccgagcaacccgttgttgaaaggctgcttaaatcatgatatggatgga
acagtccaaagccccatggggactccctctgtgtcgcaagcatcttccctcgtgtcgacg
ttcaacgacagagttggtcctttagaagaaaaatccaacatacgacctgaaaactgctac
actgagaaaagcaaaggtaaaaacagtgacttatcagaaggtagtgactttgaagatgtg
aatacaacaagtgggactgacctggacacaaccacgggcactgggtctgatttggacagt
gatgtggagagtgatcgagataaaaagaaggaaaagaccaacctgacggccaaagcggct
gacaaagtctccaccaactcaaccaatgaaattaatgagcgaacctatcttccatcccaa
cattccttctttcctcctccagatgagcagaacctaccgactagcgctgctaatgattcc
attaaagctattgcctcaatcgcggagaagtactttggcactgggttcatgggaatgcaa
gagaagaaaatggggtcgcttccataccactcaatgtttccattccagctcctcccaaac
atcccacattccatataccctttcacggaccgaaacctcaatcccaacctcttagtgaag
aatgagccaaagtcacccagggagcatcagaaaagtgggagcgccagctccgagtcaccc
tttgacctcaccacgaaacggaaagaagcgaagccccatccaacatccaagctcatggca
tctgcccttcctggagaggagcagcctctggacctgagcataagcagtcgcagccgggtc
agtcagaatggccctggggagccccgaaagaaccatgtgtttggtgaccgcaaaatgacg
atcagcgatgagatgcccaagatgtcacaccagcaaccctttcattacgcaaagccatca
cctttcttcatggatcctatttacagctggaaccacctgcattacacagccagggtggag
aaaaggaaaatgatggatcccctgaactcactgaaggaaaagtatctgcgcccgaaccca
cttctgttccaccctcagatggctgctatggaaaccatgacagaaaagctagaaagtttt
ggcacactgaaactggacaccatgggcactctacaaccccctcctcatcactcattcaac
ttccgatcaccaccatccacactgtctgatgccatcctccgcaaaggaaaggagcgttac
acatgcaggtactgtgggaagatttttccaagatcagcaaatcttactcggcatctcaga
acgcacacaggagaacagccgtataggtgtaaatactgtgacaggtcgttcagcatctct
tcaaacctgcaaaggcacgtccgcaacatccataacaaagagaagccgttcaaatgtcat
ttgtgtaaccgttgctttgggcagcaaaccaaccttgatcgccacctcaagaaacacgag
aatgagagtattccagtgagccaacattctggggtttcatccaaccacctgggcaccacc
gcttcttcaccgaactccgagctagacaatactgcacttttggaggaaaaggaggagtca
tacttctccgaaatccggaatttcattggaaacaatgacctcagccaggcgtccagttca
gctgacaaaaggcatgaggcacaaagtggccaccaagagccagatcacccactgaccaat
cagaaagcagaagaggcagatgacgaggacgatgaggaggaacttgaggaagacgatgaa
gaggaggatgagagcatgacagaaaaatcccaggatgaccctgtttcaccgaagactgat
gccagagtccagtatagagaaaatgaagaggaacatcatgccccactcaccctgggttat
gagcaggctcacaggtgtattgctgaggatgaagctggcctgctggccttggaccagata
gcgaatttcacaaaggggctggacctacgtaaggcagcagaggagcagtacgaggtgaaa
gaggccgcagtctttaattccaccttagactccgaagcaataaaagagacactgtacagg
caggctaaaactcagacttatgccatgatgctttcattctctgagaatgcttccctccat
ccatcgtcccagaactctctggatgcttggctgaacatagcaggagctacaccggagtcg
ggaacctttcatcaaatcaaccacgtgtga
DBGET
integrated database retrieval system
