Chiloscyllium plagiosum (whitespotted bambooshark): 122540488
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Entry
122540488 CDS
T08871
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03013
Nucleocytoplasmic transport
cpla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122540488
03015 mRNA surveillance pathway
122540488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122540488
Enzymes [BR:
cpla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122540488
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122540488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
122540488
NCBI-ProteinID:
XP_043532294
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All DBs
Position
34:43237480..43328006
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AA seq
495 aa
AA seq
DB search
MATDSWALAVDLQESAAESLSNLKLKEETSNAEPKEATVKHDPSDKLDKTAKLDKSGDNL
EVKQDDDDKEDKAAQSLLNKLIRSNLVQSTHQVEVLQRDPNSPLYSVKSFEELHLKKDLL
QGVYGMGFNRPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVDLSQRHPQ
CLCLSPTYELALQTGQVIEQMGKYCPDIKLAYAVRGNRLEKGQKISEQIVIGTPGTVMDW
CTKLRFIDTKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKDCQMLLFSATFEESVWKF
AQKVVPEPNIIKLRREEETLDTIKQYYVLCDNKEEKYHALCNIYGAITIAQAMIFCHTRK
TAGWLAAELSKEGHQVALLSGEMMVEQRAAVIQRFRDGKEKVLVTTNVCARGIDVEQVSV
VINFDLPVDKDGNPDCETYLHRIGRTGRFGKRGLAINMVDSKYSMNILNRIQDHFNKRIE
KLDTDDLDEIERIAN
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggactcgtgggcgctggcggtggatctgcaggagtcggcagccgagtcgctg
agcaacctaaagctgaaagaagaaacttcaaatgctgaacctaaagaagcaacggtaaag
cacgatccatctgacaaactggacaaaaccgctaaactcgacaaaagtggtgataatttg
gaagtcaagcaagacgatgatgataaagaggataaggctgcccagtctctgttgaataag
ctaatccgcagtaatctggttcaatcgacacatcaagttgaagtactccagagagatcca
aattcccctctatactctgtgaagtcatttgaagaactacatttgaaaaaagatcttctg
caaggagtctatggaatgggatttaacaggccttcaaagatccaggagaccgcgttaccc
atgatgcttgcagaaccccctcagaatttgattgcacagtctcagtcaggtactggtaag
acagctgcctttgttctggccatgctcagtcgtgtagatctctcccaaaggcacccacag
tgtttatgcctttctccaacctatgaactggctttgcagactgggcaggttattgaacaa
atgggaaagtactgtcctgatatcaagctagcttatgcagttcgaggcaacagacttgag
aagggtcagaagatttcagaacaaattgttattggcacacccgggacagttatggattgg
tgcacaaaactgagattcatagataccaagaaaattaaagtttttgtcctagatgaggct
gatgtcatgattgcaactcaaggccaccaagaccagagcattagaattcagagaatgttg
cctaaagactgtcagatgctgctattctcagctacatttgaagagtctgtgtggaaattt
gcccaaaaggttgttccagagcctaatattatcaagttgaggcgggaggaagaaacctta
gatacaattaaacaatattatgtcctttgtgacaacaaagaagagaaataccatgctctg
tgcaatatttatggagcgattaccatagcacaggccatgatcttctgtcatactcgcaag
actgctggttggctggcagctgaattgtctaaagagggtcatcaagtagcactgctaagt
ggagagatgatggtagagcaacgagccgctgtgatccagcgcttccgggatggcaaagag
aaagtacttgtcacaactaatgtctgcgcaagaggaattgatgttgagcaggtctccgtc
gtcataaactttgaccttccagtggataaagatggtaatccagattgcgagacatacctt
cacagaattggacgaacaggtcgttttggcaaacgtggcttggccattaacatggtggac
agtaaatacagcatgaatatcctcaaccgaatccaagatcatttcaacaagagaattgaa
aagcttgatacagatgaccttgatgagattgaaaggattgctaactga
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