Chiloscyllium plagiosum (whitespotted bambooshark): 122540587
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Entry
122540587 CDS
T08871
Symbol
nlrx1
Name
(RefSeq) NLR family member X1
KO
K12653
NLR family member X1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04137
Mitophagy - animal
cpla04621
NOD-like receptor signaling pathway
cpla04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122540587 (nlrx1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122540587 (nlrx1)
04622 RIG-I-like receptor signaling pathway
122540587 (nlrx1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cpla04054
]
122540587 (nlrx1)
Pattern recognition receptors [BR:
cpla04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122540587 (nlrx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRX1_C
NLRC4_HD2
WHD_NOD2
DUF815
AAA_16
AAA_7
RsgA_GTPase
NB-ARC
MeaB
HTH_72
Motif
Other DBs
NCBI-GeneID:
122540587
NCBI-ProteinID:
XP_043532419
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All DBs
Position
35:3896345..3956920
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AA seq
974 aa
AA seq
DB search
MQCRKNLLIRLKWTLIEYKPSSIVVPLPGVRNTGSAGVQCFRARNSKQLIRLMTRSLCRF
GRPGFLQCPQYRVQHSRSLSTGATQVDSIEQHRKRLRDWFSHMPNEEMRFGSFSMDNWHI
DPVIAESSPKENRELTSRLGVYSHIEPEKSRVLKANQMFASLSDTSAPAKNVLLYGMVGM
GKSTVVNKLVLDWCDGRLDQFDIILPFSCEDLSSQNQSTSMNKLIVRKYTQLRSILPQIW
SGKLGKVLLVFSDLEQLKLDFRLSKTELCNDPNEPLPPSSLLVNLLRNYLIPDANILVTT
RPSAVDSVPSRYVDRYVRICGFTDVEQQHLYFRMRLNLSPYDAASENLMKMLYRNLQRQS
QLTADCFLPSYCWIICANLHFLHFTTADMPIQNLTGLYSSFLTLNFSGQIVDASSQQNIS
IVRYIAKTVGKLAYEGIEKKKMLFSEEDLQNCFELHTKTEEELNQLTAFQTDVLGFFMSP
TAQHHSEPLLRFTVPAMQEYLAALYVVLGEKKTVLERVGNVVSETIGKASEDVTAILAIV
SKFVPFRIITLLRLVNIFPRIFRKIHTKSKKGIANTMVFEMFKEDDELNNDVLEQINESI
LGKEVGVSSPPTGDRTSTQCFELFPMFMAGLLAQSNRLLLEKLGCTIKNVTVREISNSLK
KHLSKVTIEKLPPSELMDLLLFLYELQNEVFAREICKAFQSLTLSQVKMTTLKCFVIASI
MNTSDHPIDVMNLSLCNLSEDCLKILRPVLLRCKNLNLQFNNLGLGAWQEVSHLLQDPNC
TVQNLWLCDNVLSEAAVNCIGPAIARNSSVTQLSLLHTSLGDQGVKVLTPYIQENTRLKD
LNLASNDISEEAAVTFVEMIKKHPTLETLHLYLNEISDSGKKELHRLSREQDGVKVLASI
TDGSNISAYWTLILKNVMRNATNRDQERMANYLTLFQNELKFSRQQIRNPWKKLRLLRVE
RRVEKLLRNVQQGK
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgccggaagaatttactgatcagattaaaatggactttaatagaatacaagccc
tccagcatcgttgtccccctcccaggagtcaggaacacgggatctgctggagttcagtgt
ttccgggccaggaactcgaagcagctgatcaggctgatgaccaggagtctttgtcgcttc
gggaggcctggtttcttgcagtgtcctcagtacagggttcagcacagcaggtcgctgagc
actggcgctactcaagttgactctattgagcaacatcggaagagactgcgggattggttc
agtcacatgcccaatgaggagatgaggtttggttcattctcgatggataactggcatatt
gatcctgtcattgctgaaagttcccccaaagagaacagggagctcacatcaagattgggc
gtctacagtcacattgaacctgagaaatcccgggtgctcaaggctaatcagatgtttgcc
tccctttctgatacatctgctccagcaaagaatgtgcttctgtatggcatggtgggaatg
ggcaagagcacggtggttaataaactggtcttggattggtgtgacgggcgacttgatcag
ttcgacataatcctgcccttctcctgtgaagatctgtcctcgcagaatcaatctacatcc
atgaataaattaatcgttcgcaagtacacccagctgaggtccattttgcctcagatttgg
tctgggaaacttgggaaagtgcttttggttttctctgacctggagcagcttaaacttgac
tttcgtctctcgaagactgagctgtgcaatgatccgaacgagcctctgcctcccagcagc
ctgctggtcaacctgctccgaaattacctgatcccagatgccaacatcctcgtcactacc
cggccctcggctgtggactcagtcccgagcaggtacgtggacaggtatgtccgtatctgc
ggcttcactgatgtggagcagcagcacctgtacttcaggatgcgactgaacctgtctccc
tatgatgcagccagcgagaatttgatgaagatgctgtacaggaatctccagagacaaagc
cagctcacagctgactgcttcctgccgtcttactgttggatcatctgtgcgaacttgcac
ttcctccatttcaccactgctgacatgcccatacagaacctcactggcctctacagcagc
ttcctgaccctaaatttcagcggtcaaattgtagatgccagcagccagcagaacatctca
atcgtgcggtatatcgccaagacagttggcaaactggcctacgaggggatagaaaagaag
aaaatgctcttcagtgaagaagacttgcagaactgctttgaactacacaccaagacagag
gaagagttgaatcagttaactgcctttcagacagatgtgttggggtttttcatgtctccc
actgcccagcaccactctgaaccactccttaggttcactgtacccgcaatgcaggaatat
ctggctgcactgtatgttgttctgggagagaaaaagactgtcttggagcgagtgggaaac
gtggtgtctgagaccattggaaaagccagtgaggacgtgacagcaatattggccattgta
tcgaaatttgtgccattccgaatcataacgctactgagacttgtgaacattttcccacgg
atcttcagaaagattcacaccaagagcaagaagggcattgcaaacaccatggtctttgaa
atgttcaaagaagacgatgagttgaacaacgatgttttagagcaaataaatgagagcatt
cttggtaaagaggtgggggtgagcagcccaccaactggggacagaacaagcactcaatgc
tttgaactcttcccaatgttcatggctgggttactggcccagagtaaccggcttctgttg
gagaaactcggctgcacaataaagaatgtaactgtgcgcgaaatatccaacagtttgaag
aaacatctcagcaaagtcaccatagagaagctgcctccctctgagctcatggatcttctg
ttgttcctgtacgagttacagaatgaagtgtttgcaagggagatctgcaaggctttccaa
agcttgactttgtcccaagttaagatgaccacgttgaaatgttttgtgattgcctcgata
atgaacacctccgaccacccaattgatgtgatgaaccttagtttgtgcaacttaagtgaa
gactgtttgaaaatcctgcgaccagttctcctccgctgcaagaatttaaatctacagttt
aataatcttggacttggcgcctggcaggaagtaagccatttgttacaggacccgaactgt
acagttcagaacttgtggctttgtgataatgttttgtctgaggctgcagttaattgtatc
ggacctgccatcgctcgcaacagttcagtgactcagttatcactgcttcacacgtccctg
ggagaccagggagtgaaggtgcttacaccgtacatccaagagaacacacggctgaaagac
ctcaacctcgccagtaatgacatcagtgaggaggctgccgtcacctttgtggagatgatc
aagaaacatccaacgttagaaacacttcacctgtatttaaatgagatcagtgacagcggg
aagaaggagctgcacaggctcagtcgggagcaggacggggtgaaagttctggcttcgatc
acagatggctccaacatctcggcctactggacactgatcctgaagaacgtcatgcgaaac
gccacaaacagggaccaggagcgcatggccaactacctgacactgtttcagaatgagctg
aagttcagtcgccagcaaatccgaaacccttggaaaaagctcagacttctgcgggtggaa
cgtcgagtcgagaaactgctgagaaacgtccaacagggcaaatag
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