Chiloscyllium plagiosum (whitespotted bambooshark): 122540706
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Entry
122540706 CDS
T08871
Name
(RefSeq) syndecan-1-like
KO
K06257
syndecan 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04512
ECM-receptor interaction
cpla04514
Cell adhesion molecule (CAM) interaction
cpla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122540706
04514 Cell adhesion molecule (CAM) interaction
122540706
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122540706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122540706
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cpla04090
]
122540706
00535 Proteoglycans [BR:
cpla00535
]
122540706
Membrane trafficking [BR:
cpla04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
122540706
CD molecules [BR:
cpla04090
]
Proteins
122540706
Proteoglycans [BR:
cpla00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
122540706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
BenE
DUF2613
Motif
Other DBs
NCBI-GeneID:
122540706
NCBI-ProteinID:
XP_043532760
LinkDB
All DBs
Position
3:complement(6864602..6916123)
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AA seq
335 aa
AA seq
DB search
MKMPSFSLMFLLAMGLPFALLAMSSTKVPESLVDYEIDGSGTESEDDDIYSGSGSGDGFM
LRNFDVEHTTTYRTLPSTASSNFHSSSQVAMTSDMITEADVNILLVHHDLPVVDTTIGAT
VTSSKSETLIPQATDIHLVPKNNTKSFLARGVGSKHDVTEVSSAKPTVYATLPENAVTAV
DDESLAVSKMFAVNEMTTMVGQNSEQSEKEVKNEMVDDLQLNNAINESDIYFTDIIESRT
ALNQNHIPDSKTSIEPPQERYSHEASASGSFLERRELLAATVASGFVGLVLAVLLVAVLV
YRMKKKDEGSYTLDESKQLPNGGYQKPQKQEEFYA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgccaagtttcagtctgatgtttcttttggcgatgggattgccttttgccctc
ttggcaatgtcttcaacaaaggtgccagaaagtctagttgactatgaaatagatggatct
ggcacagagtctgaagatgatgacatctattctggctctggttctggtgatggctttatg
ctgagaaattttgatgtggagcatacaacgacttatcgcacacttccttcaacagcttca
agtaatttccattcatcaagccaagtagccatgacaagtgatatgatcacagaagcagat
gtgaatattttactggtgcatcatgacttaccagtggttgatacaactattggagccaca
gtgacgagtagtaaatctgaaactttgattccacaagccactgatattcatcttgttcct
aaaaacaacactaaaagttttctggcacgtggagttggatccaaacatgatgttactgaa
gtgagcagtgccaagcctactgtttatgccacgttaccagagaatgcagttactgctgtc
gatgatgaatccttagctgtctcaaagatgtttgcagtaaatgaaatgacaaccatggtg
ggtcaaaattctgaacaatctgaaaaggaagtgaagaacgagatggttgatgatttacaa
ctgaacaatgcaatcaatgagagtgatatatacttcacagatataatagaaagtagaact
gctctgaatcaaaaccacattccagattcaaaaacatctattgagccaccgcaggagaga
tactctcatgaagccagtgcatctgggagctttctggaacgaagggaattattggcagca
actgttgcttcaggatttgtgggacttgtactcgctgttctacttgttgcggtgctcgtg
tatcgaatgaagaaaaaggatgaaggaagttatacgttggatgaatccaagcaactacca
aatggaggctaccagaaaccacaaaagcaagaggagttctatgcataa
DBGET
integrated database retrieval system
