KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122540771
Entry
122540771         CDS       T08871                                 
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
  KO
K14298  mRNA export factor
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122540771 (rae1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpla03019]
    122540771 (rae1)
   03036 Chromosome and associated proteins [BR:cpla03036]
    122540771 (rae1)
Messenger RNA biogenesis [BR:cpla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     122540771 (rae1)
Chromosome and associated proteins [BR:cpla03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    122540771 (rae1)
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_RFWD3 Beta-prop_IFT140_1st eIF2A Beta-prop_EIPR1 NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_HPS5 WDR90_beta-prop_4th B-prop_COPA_B_2nd
Other DBs
NCBI-GeneID: 122540771
NCBI-ProteinID: XP_043532918
LinkDB
Position
35:41409131..41448484
AA seq 376 aa
MSIFGTSGGFGTGSMFGGTTTDNHNPMKDIEVVSPPDDSISCLEFSPPTLPGNFLIAGSW
ANDVRCWEIQDSGQTVPKAQQMHTGPVLDVCWSDDGSKVITASCDKTAKMWDLNSNQAIQ
IAQHDAPIKTVHWIKAPNYSCVMTGSWDKTLKFWDTRSPNPMLTLQLPERCYCADVLYPM
AVVATAERGLIVYQLENQPSEFKRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAI
HYINPPNPAKDNFTFKCHRSNGTTNTSGPQDIYAVNGIAFHPLHGTLATVGSDGRFSFWD
KDARTKLKTSEQLDQQIAACCFNNNGNIFAYSSSYDWSKGHEYFNPQKKNYIFLRNAAEE
LKPRNKKGRGVGDIRS
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgagcatatttggaacaagtggagggtttggaactgggagcatgtttggagggacaaca
actgacaaccacaatcctatgaaggatattgaagtggtgtctcctcctgatgacagcatc
agctgcttggagtttagccctccgacgttaccaggaaactttctcattgctggatcctgg
gccaacgatgtacgttgctgggagattcaggacagtggacagaccgttccaaaggcccag
cagatgcatacaggtccagtgttggatgtctgttggagtgatgatgggagcaaagtgatc
acagcatcatgtgataaaactgcaaagatgtgggatctcaacagcaaccaggcaatacag
attgcacaacacgatgctcccattaaaaccgtccactggatcaaagcacctaactacagt
tgtgtaatgactggaagctgggacaagacgttgaagttctgggacacgcgttctccaaat
cccatgctgacgttgcagctgccggagagatgttactgtgctgatgtgttgtatccaatg
gctgtggtcgccactgcagagagaggcctgatagtttatcagctcgagaaccagccttca
gaattcaaaaggatagactctcctctcaagcatcagcaccgctgtgttgccatcttcaaa
gataaacagaacaagccaacaggatttgctcttggaagtattgaggggcgagtggccatt
cattatataaaccctcccaaccctgcaaaagacaacttcactttcaaatgtcaccgatct
aatggaacaaccaatacatctgggcctcaggatatttatgctgtgaatggaattgcattc
catcctctccatggcaccctggccactgtaggatctgacggcaggttcagtttttgggac
aaagatgctcgcactaagctgaaaacctcagaacagcttgaccagcaaatagctgcctgc
tgcttcaataataatggaaacatttttgcctattcatcaagttatgactggtcaaagggt
catgaatatttcaatccacagaagaagaattacatcttcctgcgcaatgctgcggaggag
ctgaaacccaggaacaagaaaggacgtggagttggtgatatccgttcttga

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