Chiloscyllium plagiosum (whitespotted bambooshark): 122540775
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Entry
122540775 CDS
T08871
Name
(RefSeq) transcriptional repressor CTCF-like
KO
K23195
transcriptional repressor CTCF
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122540775
03036 Chromosome and associated proteins [BR:
cpla03036
]
122540775
Transcription factors [BR:
cpla03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122540775
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122540775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
zf-C2H2_15
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
A24_N_bact
zf-C2H2_6
zf-C2H2_REST
zf-C2H2_2
zf-AtTam37
Cmr2_Zn-bd
Motif
Other DBs
NCBI-GeneID:
122540775
NCBI-ProteinID:
XP_043532923
LinkDB
All DBs
Position
35:complement(41744031..41807472)
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AA seq
545 aa
AA seq
DB search
MMENEILPHDTTIFLAKSEEDIMEYSVERGVSDKMHVITLQVVNMDEHIQPSLTEVNMMT
MNQQGVEMIPSELRQALSSEGEIMHTLPLPEGVQVFKVGPNGEMQYIERMELDAAHTPEE
YIGTVIEQYHDPLVKKEKRSLQCDIQIGNNTDVTVHLCRDRQLEGLQSGVAVEKTTSSAI
TAGLNKTKKQDIKKTFQCKLCSRTFTQRSNLDRHMRSHSDERPHRCHLCEKAFRTVTLLQ
NHINTHTGTRPHKCPDCAMAFVTSGEVVRHRRYKHTHEKPFKCSICDYASVEVSKLKRHI
RSHTGERPFPCTFCSYASRDTYKLKRHMRTHSGEKPYKCHVCEANFTQSGTMKMHIRQKH
TDNVPKYHCPHCDAIIARKSDLGVHLRKQHSYTSLSMKCRYCDATFHERYVLIQHQKTHR
NEKRFKCDQCDYACKQKRHMIMHKRIHTGEKPFSCSHCDMHFRQKQLLDLHFKKNHDPSF
IPEAYICSQCCKSFSRKNVMKRHAERCGNVTIQDGNPKFMVKKRRNRKNKLEYKHNAEAK
GGTFY
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaaatgaaattttaccccatgatacaactatatttttggcaaagtcagaagag
gacatcatggaatattctgtggagcggggagtatctgacaaaatgcatgttatcacattg
caggtagtcaacatggatgaacacatccagcccagcctgactgaggtcaacatgatgaca
atgaaccaacaaggagttgaaatgattccaagtgagctgaggcaggccttgagtagtgag
ggtgaaatcatgcacactcttccactccctgaaggagtgcaggtttttaaggtagggcca
aatggagagatgcagtatattgagagaatggaactggatgcagcccatactccagaagaa
tacatcggcacagtgatagaacaataccacgatccacttgtcaagaaagagaaaaggagt
ctgcagtgcgatatacaaattgggaataatacagatgtgaccgttcatctttgtagagac
agacaactggagggactacagtcgggtgtagctgttgaaaaaacaactagttctgccatt
acggctggacttaacaaaactaaaaagcaagatattaagaagacatttcagtgtaaatta
tgttcacgcacttttacacaacggtctaatctagaccgtcatatgagaagccattcagat
gagcgtccacacagatgtcatctttgtgaaaaggcattccgaactgtcaccctcctgcaa
aaccatatcaacactcatacaggtacaagaccacacaaatgccctgactgcgcaatggca
tttgttacaagtggggaggtggtgcgacacagacggtacaagcacacccatgagaaaccc
ttcaaatgctcaatctgcgattatgctagtgttgaggtaagtaaactgaagcgacacatc
cgttctcacaccggggagcgtcctttcccgtgcacattttgcagctatgctagcagagat
acatacaagctgaagcgacatatgagaactcactcaggggagaagccttacaagtgccat
gtgtgcgaggctaattttacacagagtggaacgatgaaaatgcacatccgacagaagcac
acagacaatgtgcccaaataccactgtcctcactgtgatgccatcattgcaagaaaaagt
gacttgggtgtccatttacgaaagcagcattcctacacaagcttaagcatgaagtgtcgt
tactgtgatgctacattccatgaacgctatgtactcatccaacaccaaaagacccacagg
aatgagaaacgtttcaagtgtgaccagtgtgattatgcatgtaaacagaaacgtcacatg
ataatgcataaacgtatccacactggggaaaagccattcagttgctcccactgcgatatg
cacttcagacagaagcagctcctggatttgcatttcaagaagaaccacgatccaagtttt
atcccagaagcatacatttgctcccaatgttgtaagagcttttctcgcaagaatgtcatg
aaaaggcatgctgagagatgtggcaatgtgacgatacaagatggaaatccaaagtttatg
gtaaagaaaaggagaaacaggaagaataaattggagtacaaacacaacgctgaagcaaaa
ggaggtacattttattaa
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integrated database retrieval system
