Chiloscyllium plagiosum (whitespotted bambooshark): 122540836
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Entry
122540836 CDS
T08871
Symbol
strc1
Name
(RefSeq) stereocilin
KO
K24636
stereocilin
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cpla03037
]
122540836 (strc1)
Cilium and associated proteins [BR:
cpla03037
]
Other cilia and associated proteins
Stereociliary proteins
122540836 (strc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Stereocilin
Motif
Other DBs
NCBI-GeneID:
122540836
NCBI-ProteinID:
XP_043532988
LinkDB
All DBs
Position
36:1424596..1490336
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AA seq
1789 aa
AA seq
DB search
MMKNFADVMKTDRKGLNFYADYCEKRSLNVGPFSSTSDTRQIEDLTCNYDSWVAGDLFNS
TDFGYCAVVDEVGFRKTVCPNTSLLESIMKNPAHFWLKDFCDSSSNTMLVPMLMTEVVSD
SAYIGFTSSPATIVPPVKEVDIHCRYDEWTDFSMVDDKVITFCASHDGDQFTNVVCSDLS
ALQELIKNNFWLADFCNNYSILSGNSEFCMYDKWEEKPIDPSIISLCWRSDQTNFNKSVC
NDAILLNKLVQDPGNTWLMSACSAENSCDYEAWLNDLSVASAVVALCKETDQAAFNHMVC
TSPSLLEILLNNSENSWLNNYCASNTHSTVVSSVIPEEGSDTVLPHATAYPTTQDLTNAV
ENLCRYENWMYSAVVDSTVVAVCFNTDREQFNIYVCKNPVILQELLKNEFNLWLTDFCND
SSILASSDTDVATYCHYSQWTHENVDPYLVDFCWRNDKANFTRFVCHSKALLSELLLYPE
NAWLKSHCNIQINPHTSDENESCRYEEWIDVSSIDLAAVEFCSQYDLDNFVQAACHNSTR
LWGLLINMSSTWLPSYCSYVEADGINPAAMCIYSFWTEQQVDPTTVALCFDYDQSNFNKY
VCQDPNVLHALTSDPENTWVEADCMEINNSTNSMEIKICPMEDLISQLQWTCTLNASQLC
TYEQFRLGDIPPLIMCGLENIGLMLHNTLSEDLTVSLMNAINKIIMVLMALEDDRIIFLQ
VVQNAKRSVLHTVLNYLQNENNYRIKKELLHCFGSVLLNLVQKEGGSSGMDLVREYLKLS
AVDLEGVLFALDIQAAKQLLQLLNTNWNGLQIQDDLKRVMAAIYFNRILLVDPNIFPEFD
NFLPLLSASEIQALPAILDKEQVLYMVNQSFGKLSSDQRRAFAQWAVDSGQYSNITTWSL
KFLHQVSSLLVYLPFEKFQLLTRLQILNSLNVLLMNNLTTVQERFVIHSILKEGSAMTAA
EFESLGRLMCSATTQDLRFYKQNLQVFDIIKKQILKCIGDQIFVPNELLTEVLVRTTSVT
NQEILMHDELLSMAGLLPILGLSFIKQLQPAQIQGMLPELSAMTFSPVQAREITDKILQN
ASITEELLSNLGSLVIGLNPSILQVIPTALLVHAMPSMAEYEWKLSPVQKLIIVNKLWAS
GNMKWIKDLDSLIKDVPLITLRSKLTMLLSNVNVTSQMKWSVQQAQMLFRKVLEANGHNM
TKDLFISLGFVAHGVDCLTLKHLTTPNALLTLLQFFRDLPIEMPVPLRSCILEAMNGFVL
SMETMQSMRPQLLFDLQLLKMRRFSNNMTQRLLHILVENPIPFLKIPSSKQSLMVDWILQ
VLDLYDRRFSKAEFNLLGHALAFVSDEIFMAISQAEMKANLLKIKNYCFDRGKKFLLGDM
LTKDTMFGVTTNWTSLTLDKIDRLVFFLSIDNLQKIPQNVLIMERIEMLFHSQKQWEESD
FGSACLQKMETSDLDDLFRKQQILLQTSARLLSAKRLQTKNDLVLSCNAVRTTLPSVWTI
DLLTGMSNDDFVSCLELFGQDPHFQSFELFQLMERVKQIYRPVSAMPPKVIEQLGQIATQ
FTEKDLTRLDLSDLGAVTALGKIAEWSQKKLTVLFTTFLRVNRRSVNELDSVSLVALGHL
ICGIKQADISAIDPMQFSMAVLWTGRLSLSCDEQQLAALAKLVTHSPTFGDVSHWRSEEF
TEIGSIAAGLPDIILSALVKEQIEGLTPVAVATISPKKFSVVFSPTQIRMFNYQQAVAVT
PEDHLEKLFQEALLEYYFVLFVLFYLQVEKLICKIHFIFNPLMCLSNIA
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaactttgcagatgtcatgaaaactgatagaaagggattaaacttctatgct
gattactgtgagaaaagaagtctcaatgtggggcctttttcttctacaagtgacaccaga
caaattgaagatctgacttgtaattatgattcttgggttgctggagatttgttcaactct
acagattttggttattgtgctgttgtagatgaagttggattcagaaaaactgtctgccct
aatacgtcactgttggaaagcatcatgaaaaacccagctcacttttggctgaaagacttc
tgtgatagcagttcaaatactatgcttgtccctatgcttatgactgaggtggtcagtgac
agtgcctatattggcttcactagcagtccagccaccattgtccctcctgtaaaagaagtg
gacatccactgtcgttatgatgagtggacagacttctccatggtagatgataaagtgatc
acattttgtgccagtcatgatggtgaccaattcaccaatgtggtttgcagtgatctatca
gcacttcaggagctcataaagaacaatttctggctggctgacttttgcaataattactcc
attttgagtggtaacagtgaattctgcatgtatgacaagtgggaagagaaacctatagat
ccatcaataatttcgttatgttggaggagtgaccaaacaaactttaataaatcagtttgc
aatgatgcaattctcctaaataaactggtgcaggatcctggcaatacttggctcatgtct
gcctgcagtgctgagaacagttgtgactatgaagcatggctgaatgatctttccgtggcc
tctgctgttgtggcactctgcaaggagacagatcaagctgcttttaatcacatggtttgc
accagtccatcactgttggaaattctgctgaataattctgaaaactcctggctgaacaac
tactgtgccagcaatacacattccacagtggtctccagtgtaattccagaggaaggcagt
gatacggtgctgccccatgccactgcctacccaaccacacaagatcttacgaatgctgtg
gaaaatctttgccgctatgaaaattggatgtactcagctgtagtagatagcactgtggta
gcagtgtgtttcaataccgatagggagcagttcaacatctatgtgtgcaaaaacccagta
attcttcaggagttattgaagaatgagttcaatctttggctgactgacttttgtaatgat
tcgtccattttggcaagtagtgatacagatgtggccacctactgtcactacagtcagtgg
acacatgaaaacgttgatccttacctggtagatttttgttggaggaatgacaaagcaaat
ttcactcgatttgtttgtcacagtaaggcattgctaagtgagttgttgttgtatcctgaa
aatgcctggttaaaatcccactgcaacatccaaatcaatccacatacaagtgatgagaat
gaatcctgcagatatgaagagtggatagatgtctcttctatagatcttgctgctgttgaa
ttctgtagtcaatatgacctcgacaattttgtacaagctgcttgtcacaattcaacacga
ttgtggggtttgctcatcaatatgagcagcacctggctccctagctactgctcatatgtt
gaagcagatggaataaatcctgctgccatgtgtatttattctttctggacggaacaacag
gtggacccaactactgtggcactctgctttgactatgatcagagtaatttcaataaatat
gtatgccaagatcccaatgtgcttcacgcattgaccagtgatccagagaacacttgggtt
gaggcggactgcatggaaatcaataactctaccaattctatggagatcaagatctgccca
atggaagatctcatctcacaactccaatggacatgcactctgaatgcatcacagctatgc
acatatgaacagttccgattgggagatattccgcctctgattatgtgtggtttggaaaac
attggtctgatgctacataacacacttagtgaggacctgacagtaagtcttatgaatgca
ataaataagatcatcatggtcttaatggctctggaagatgatcgaattatattccttcaa
gttgttcagaatgctaaaagaagtgtcctgcatactgttctaaactacctgcagaatgag
aacaactacagaatcaagaaagaattgctccactgttttgggtctgtcctattgaacttg
gtgcagaaggaaggaggatcatcaggcatggacttagtaagggagtatctgaaactttct
gcggtcgatcttgaaggggtgctttttgcactcgacattcaagctgcaaagcagctccta
cagcttttaaacacaaactggaatggtttgcagattcaggatgatttgaagcgagtcatg
gcggctatttacttcaacagaatcctgcttgtcgatccaaatatctttccagagtttgat
aatttcctaccacttctgtcagcatctgagatccaagctcttccagcaatcttggacaaa
gagcaagtattgtacatggttaatcaaagctttggaaaactgtccagtgaccagagacga
gcctttgcccaatgggcagtggattctgggcagtatagcaatatcaccacatggtctttg
aaattcctgcatcaagtcagtagcctgctggtatacctaccgtttgaaaaatttcagctt
ctgacccgactacagatactcaactcattgaatgtgctgttgatgaataatttaactaca
gtccaggaaaggtttgtcattcatagcatcttaaaagagggaagtgcaatgacagctgct
gagtttgagtcactgggcagattgatgtgttctgcaactactcaggacctaagattctac
aaacagaatctgcaagtgtttgatatcatcaagaaacagatactgaaatgcattggggat
caaatctttgttcctaatgaattgctcacagaggttttggtcagaacaaccagtgtaacc
aatcaagaaatcttgatgcatgatgaattattaagtatggctggccttcttccaatcctt
gggttgtccttcataaaacaacttcaacctgcacaaatacaaggaatgcttccggaactc
agtgcaatgactttttctcctgtgcaggcaagggaaataactgacaagatacttcaaaat
gcatcgattacagaggagttgctgagcaacctggggtcattagtaattggtctcaaccct
tcaattctgcaagtcattccgacagctttactggtgcatgccatgcccagtatggcagag
tatgaatggaaactcagtcctgttcagaagctgatcattgtaaacaagctatgggcttct
ggcaatatgaagtggatcaaagatttggattctcttataaaagatgttcctctaataact
ttgagatcaaagttgaccatgttgttgtccaatgtcaatgtcaccagccagatgaaatgg
tctgtgcaacaggcacaaatgctgtttagaaaagttttagaagcaaatggccacaatatg
accaaagatcttttcatttctcttggatttgtggcacatggtgtggattgtctgactctg
aaacatctgaccacgcccaatgcacttctgacattgctacaatttttccgggatttgcca
attgaaatgccagtgcctttgaggagttgcattttggaagcaatgaatggatttgtcctt
tccatggagaccatgcaaagcatgcgacctcagctgctgtttgaccttcaattgttgaaa
atgagaagattttcgaacaacatgacacagagattgctgcatatcctggtagagaatcca
attcctttcttaaagatcccaagttcaaagcagagcctgatggtagactggattttacaa
gtattggatttgtatgatagacggttttctaaagccgagtttaatttactgggacatgcc
ctagcttttgtttctgatgaaatattcatggccatttcccaagcagagatgaaggcaaat
ttattgaagattaaaaattactgctttgacagaggaaagaaatttctgttgggtgatatg
ttgactaaagacaccatgtttggtgttacaacaaattggacctcgctgaccttggataag
atagaccgcctggttttcttcctttcaattgataatttacagaagattcctcagaatgtt
ttgatcatggagaggattgagatgttgtttcacagccaaaaacagtgggaagagagtgac
tttggttctgcctgcctgcagaaaatggagacttctgatcttgatgacctctttagaaag
caacaaatattattgcagacctcagccagacttctcagtgcaaagcggctacagaccaaa
aatgatcttgtcctgagttgcaatgcagtccgaaccacccttccatcggtatggaccatt
gatttgttgactggcatgtccaatgacgacttcgtcagctgtttggaattgtttggtcaa
gatcctcacttccaatcatttgaactgtttcaactcatggagagggttaagcagatttac
agacccgtgtcggcaatgccacccaaggtgattgagcagctggggcaaatagcgactcag
ttcacagaaaaggatcttacgaggttggacctgtcagaccttggagcagtgacggctcta
ggtaaaattgcagaatggagccagaaaaagctcaccgtactatttacaaccttcctgcgg
gtcaacaggcgcagtgtaaatgaactggattctgtcagcttggtagctctggggcacctt
atttgtggcatcaaacaagcagatatctctgcaatagacccgatgcaatttagtatggca
gtcctgtggaccggaagactgagcctatcctgtgacgagcagcagctggcagccctggcc
aaacttgtcactcactctccgacattcggagacgtcagccactggagatctgaagaattc
actgaaattggttctattgcagctggactaccagatattatactgtcagctctggttaaa
gaacaaattgaaggactcactcctgttgctgtggctactatctcgccaaagaaattttcc
gttgtattcagtcccacacagattcgcatgtttaattatcagcaggcagtagctgtgact
cctgaagatcatctggagaagttatttcaggaagcgttattggaatattattttgtgttg
tttgtactgttttaccttcaagtagagaagcttatctgtaaaatacatttcatcttcaat
cctttaatgtgtctgtctaacattgcataa
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integrated database retrieval system
