Chiloscyllium plagiosum (whitespotted bambooshark): 122540838
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Entry
122540838 CDS
T08871
Name
(RefSeq) integrin alpha-11-like
KO
K06587
integrin alpha 11
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04510
Focal adhesion
cpla04512
ECM-receptor interaction
cpla04518
Integrin signaling
cpla04810
Regulation of actin cytoskeleton
cpla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122540838
04518 Integrin signaling
122540838
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122540838
09142 Cell motility
04820 Cytoskeleton in muscle cells
122540838
04810 Regulation of actin cytoskeleton
122540838
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpla04515
]
122540838
Cell adhesion molecules [BR:
cpla04515
]
Integrins
Integrin alpha subunits
122540838
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_3
FG-GAP_3
FG-GAP_2
ITGAX-like_Ig_3
vWA_Rv0959
Motif
Other DBs
NCBI-GeneID:
122540838
NCBI-ProteinID:
XP_043532990
LinkDB
All DBs
Position
36:complement(5239466..5431930)
Genome browser
AA seq
1095 aa
AA seq
DB search
MTRCGSPVGTGGRVSVMEKGLLVGAPWAGVGKKRTGDVYRCPVKNQTSYGCGKLNLGRVS
MPFVSEHKDNMQLGMTLTSNAKDHSFVTCGPLWSHECGSSYYSPGICCKISSNFKSARAF
APAIQRCETFMDIVIVLDGSNSIYPWYEVQNFLINILKKFYIGPGQIRLAIVQYGETAVH
EFELRDYKSVHDVVKAARNIQQRGGTETNTAHGIEIARSEAFSIRRGARKEAKKVMIVIT
DGESHDSPHLKQVIESSEQDNITRYAIAVLGYYNRRGINPRDFLKEIKSIASHPDDKHFF
NVSDEAALKDIVDALGARIFSLEGTNIQNETSFQLEMSQAGFSTHFVEDGILLGAVGAYD
WTGAVLKQTSHGRVIPPKDAYMKEFPKKLKNHGAYLGYTITSVMPKSGRRWYVSGAPRFN
HTGKVIVFTMKNDGSVTIHQSLKGQQIGSYFGSELTPVDVDADGVTDVLLVGAPMFFSDG
REKGKIYIYSLSKRGFIFNSFLEISDKSQNSRFGSAIAAVRDLNYDSFNDVVVGAPLEDD
HRGAIYVFHGHNKNILKDYKQRIGASEISRGLLYFGRSIHGQLDMNGDGLVDLAVGALGS
AVQLWYNVSIDERRYTPRALFDDNFEKYIHSNISVEPDLETCDQCYFHVLDTLDYVRPIG
FILDFGLLDPEYGPILDDGWPNTTRTTLGFWSDCGEDEHCVPDLGLRARADISGSSRFPF
IVENTRRRISVDAWLENKQENSYGTMLNVTFSGNLQFATLIQKDDTEVRIDCNNLARWPN
SKVCTVAYPVFRSQSKVAFRLEFEFSRFIFLDNVDISLTVSSDSEEAEETLSDNTYQLYV
PVQYEADILLTRDSSPERYDVKSVEELESNGEFDPPFNFTFKLQNLGPFTVGHLLVKVTI
PTLTKGSNLLLVLTNSSSSPQDGIQCTLTGHVAQQQWLPPRGQAVTEDLRTYEKLDADNS
QFSLLLCDVKNFKTSDEYSVHISGRLVTDSLVALKFRSLLLVTTATLDIWEPRAMFLKDS
ARSREITLHLTKQHESEVSIWIIIGSLLGGLLLLALLILALWKLGFFQSAYRRRKEAMAT
GNGSIEQSSKKGTEH
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgacaaggtgtggctctccagtgggcactggtggcagagtatcagtgatggagaaaggg
cttctagtcggtgccccatgggctggtgtcgggaagaaaaggactggggatgtttaccgg
tgcccagtgaaaaaccagaccagctatggatgcgggaagctgaacctgggaagagtatcc
atgccttttgtatcagagcataaagacaacatgcagcttggaatgactttaaccagcaat
gccaaggaccattccttcgtgacctgcgggccgctgtggtcccatgagtgtgggagctcc
tactacagccctgggatctgctgcaaaatcagctccaacttcaaaagtgcccgggccttc
gcacccgccatccagcgctgtgagacctttatggacattgtgatcgttttagatggctcc
aacagcatttacccttggtatgaagtccagaacttcctgatcaatatcctgaagaaattt
tacattggacctggccagatacggctggccatcgtgcagtacggagagaccgctgttcac
gagtttgagctgagggactacaagtctgttcatgatgttgtcaaagctgccaggaatatc
caacaacgaggagggacagaaaccaacacagcacatggcatcgagatcgcacgctcggaa
gcattcagcatcaggagaggcgcaaggaaggaagccaagaaggtgatgattgtcataacc
gacggtgaatcacatgacagcccacatctaaagcaagtgattgagagcagcgagcaggac
aacatcaccagatatgccattgcggtgctgggctattacaacaggaggggtatcaatcca
cgtgacttcctcaaagagattaaatcaatagctagccatccagatgataaacatttcttc
aacgtctctgatgaggcggccctgaaagatattgtggatgcgcttggagcacgaatcttc
agcttggaaggaaccaacattcagaacgaaacatctttccagttggaaatgtcacaagcg
ggattctcaacccactttgtggaggatgggatccttcttggcgcagttggggcctatgat
tggacaggtgctgtcttaaaacaaaccagtcacggccgagtgatccctcccaaagatgcc
tacatgaaggaattcccaaaaaagctgaagaaccatggggcctatctgggctacaccatt
acttcagtgatgccaaaatcgggtcggaggtggtatgtgtcaggcgctccaagattcaac
cacaccggaaaagtcatcgtattcacgatgaagaatgatggtagtgtcaccatccatcag
tccctgaagggccagcagattggatcatactttggaagtgagctaacgccagtggatgta
gatgctgatggggtgaccgatgttttactggttggtgctccaatgtttttcagtgatggg
agagagaagggtaaaatctacatctattccctctccaagagaggtttcattttcaatagt
ttcttggaaatttccgacaaatcccagaactcccgctttggctctgcaatagctgctgtc
cgtgacctcaattatgattcattcaatgacgtggtggtgggggcacctttggaagatgat
catcgtggagcaatttatgtgtttcacggacacaataaaaatatcctcaaggactacaaa
cagaggattggggcatctgagatcagccgcgggctgctgtactttggccgcagtattcat
ggacagttggatatgaacggtgatggcttagtggatctcgcagtgggagcactcggtagt
gctgttcagctctggtacaacgtttccattgacgaacgcagatacacacccagggcgctc
tttgatgacaactttgagaagtatattcacagcaacatcagcgtggagcctgacttagaa
acttgtgatcaatgctattttcatgttctggatacactggactatgtgagacctattgga
tttatactggactttggccttttggacccagagtacggcccaattctggatgatgggtgg
ccgaacacaaccaggaccacgctcggtttctggagcgattgtggtgaagatgaacattgt
gttcctgatctggggctccgtgcgcgtgctgatatttctggttccagccgattccccttc
attgtcgaaaacacaaggaggagaatctctgtggatgcctggctggaaaacaagcaggag
aactcatatggtaccatgctcaatgtcaccttctctgggaacctgcagtttgcaacactc
atacagaaggatgatactgaggtgagaatcgattgcaacaatttggcaaggtggcctaac
agcaaagtatgcactgtcgcgtacccggtgttcaggtcccagtccaaggtggcttttcgc
ttggagtttgaattcagccgcttcatcttcctggacaatgtggacattagcctgactgtc
agcagtgacagtgaggaagcagaagaaacactttctgacaacacctatcagctgtatgtt
cctgtgcaatatgaagcagatatcctcctcacaagggattccagtcccgaacgctacgat
gtgaaatcagtggaagagttggagtcaaatggagagtttgatcctccctttaacttcaca
tttaagcttcagaatctgggacctttcactgttggccatttgctggtcaaagtgaccatc
ccgacactaactaaagggagcaatcttctcctggtcctgactaacagctccagcagcccg
caagatgggatccagtgcactttgaccggtcatgtggctcagcagcagtggctccctccc
agaggacaagctgtcacagaggatctgaggacttacgagaaactggatgctgacaactct
cagtttagtctcctgttatgtgatgtgaagaactttaaaaccagtgacgaatactccgtt
cacatttctggcagactcgtgacagattcattggtggcgctcaagtttaggtctctgcta
ctcgttaccacggcaacccttgacatttgggagcccagagcaatgtttctaaaggattcg
gcccggagccgggagattacacttcacctgaccaagcagcatgagtccgaggtctccatc
tggattataattgggagtttgttgggaggtcttctcctgcttgcactcctcattctcgct
ttatggaagcttggctttttccaaagtgcataccgtcggaggaaagaagccatggcaact
ggaaatggctcaattgagcagtcatcaaagaaaggcacagaacattga
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