Chiloscyllium plagiosum (whitespotted bambooshark): 122540844
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Entry
122540844 CDS
T08871
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122540844 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122540844 (myo5c)
04131 Membrane trafficking [BR:
cpla04131
]
122540844 (myo5c)
03029 Mitochondrial biogenesis [BR:
cpla03029
]
122540844 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpla04812
]
122540844 (myo5c)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
122540844 (myo5c)
mRNA cycle factors
P-body specific factors
122540844 (myo5c)
Membrane trafficking [BR:
cpla04131
]
Others
Actin-binding proteins
Myosins
122540844 (myo5c)
Mitochondrial biogenesis [BR:
cpla03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
122540844 (myo5c)
Cytoskeleton proteins [BR:
cpla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
122540844 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
Csm1_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
122540844
NCBI-ProteinID:
XP_043532996
LinkDB
All DBs
Position
36:complement(15234702..15320625)
Genome browser
AA seq
1649 aa
AA seq
DB search
MAVAELYTKYNSVWIPDPDEVWQSAEITKDYKKGSDVLFLQLEDGTELEYPIDPVKIQLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVDSKLIYTYCGIILVAINPYKEIPIYG
DAIIHAYSGQNMGDMDPHIFAVSEEAYKQMARKNRNQSIIVSGESGAGKTVSARYAMRYF
ATVSKSSSKACVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFNNQYRIIGANMR
TYLLEKSRVVFQRDDDHLKVFSELLGIKLEEMAHGLCHRKIATTSDTVIKPMTKGQAINA
RDALAKHIYAHLFSCIVDHINKALQFSGKKHTFIGVLDIYGFETFDVNSFEQFCINYANE
KLQQQFNLHVFKLEQDEYMKEDIPWALIEFNDNQPCIDLIEAKMGILELLDEECLLPQGT
EENWLQKLQNNYLNKNPLFEKPRMSSKAFIILHFADKVQYECDGFLEKNRDTLYEELINV
LKKSKLSLLADFFQENEQSTGSLKPNIKVRPARPGFKSFNKQHRTTVGSKFRNSLHLLMN
TLNATTPHYVRCIKPNDLKLQFEYDSKRVVQQLRACGVLETIRISAQSYPSRWTYFEFFS
RYRILMSQQDLALDDKKQICKEVLKHLIQDPNQYQFGKTKIFFRAGQVAYLEKLRADKLR
AASVTIQKNLRCWIQRKKFLKMKRAAIIIQQYVRGERAVRRVLNAAILKQSWAAVIIQKH
WRRFSVSHHYHLILKAIIRIQSFTRGWLARRQYKKMLQDQKALVIQKHVRAWLVRRRYQS
IRRFVLNIQLSFRVKQLHKKLDEQSKENKGLLERLTHLSTIHSADLNKYQKLEEELQKAV
TQKQFIEEQVKKSKGQTEQTLSEFRKQTLSLQAQNQKLEKQHQEQTQALKEKMNEITCQH
LGDLEREEQRRRTLENNFQTQKENYEKQIKALIDEIKHLQEERIQLQEQIQEEYLINDGL
RKDLAQLADEALVIPKLKGDIATLEMKNQDLDMCLQKQRKEMREKVEEITKQLLGGLEGE
ELRKRLSPEDMEQLNEDGELWFAYEGLKRATRVMEMHIQSQKENYEKEIEELSFRIDQLC
EETTHLQQKVEAENDTNETIRQEVTRLAKENLVIPEFKLQILELQKQKQDIEKHLQGQVV
EMKEKMEEVTDQLQGNLKEEGFQRRLVEIQKANCAKENMELLDKVRKLENENHQLLNWTQ
ADSAASNRMKQEASQLTLENWDLEERLDQKEKQIRKLQHQIKSLTKTIDRGNRANGKVSP
FVKKEFLGMLECKTEDEEKLIKNLILDLKPRGVVVNMIPVLPASILFMCIRYADDSNDAE
MLKSLMNSLLDGIKTVTKNHSEDFEMLSFWLSNSVHFLNCLKQYSGEEEFMKYNTPQQNS
QCLKNFDLSEYRQILSDLAIHIYQQLIQVMEDDLQPMIVPGMLEHESLQGISSMKPTGLR
KRSSNYQEEVDKYTISSILQQLSYYFTTMCQHDMDTDLTKQAVKQLFFLIGTITLNNLFL
RKDMCSCRKGMQIRCNISYLEEWLKDKNMQSSNAKETLEPLSQAAWLLQVNKTTDDDVKE
ICAKCTSLSAVQIVKILNSYTPIDDFEKRVAPSFVRKVQSQLNSRGDGSTLIIDAKYHFQ
VTFPFSPSPQALETIQIPSSFKLNFLTRI
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcagaactgtacaccaagtataatagtgtttggatccctgaccctgatgaa
gtctggcaatcagctgagattactaaggactataagaaaggatcagatgtactatttctg
cagttagaagatggcactgaattggagtatccaattgatcctgttaagatacaactgcct
cctctccgaaatccagacatactggtgggtgaaaatgacctcacggcactcagctatctc
catgagcctgcagttttgcataacctcaaagtgcgctttgtggattccaaactcatctac
acttactgtggtattattcttgtggctattaacccttacaaagagataccaatctatgga
gatgccatcatccatgcgtacagtgggcagaatatgggcgatatggatcctcatatcttt
gctgtgtccgaagaagcttacaaacaaatggccaggaagaatagaaaccagtctattatt
gtaagtggagaatcgggtgcagggaagactgtgtctgctcgatatgcgatgaggtatttt
gctactgttagtaagtccagtagcaaggcttgtgtagaagataaagtccttgcatcaaat
cctataacagaggctattggaaatgcaaagacaacacgaaatgacaatagtagccgtttt
ggtaaatacacagagatcagttttaataaccagtatcgaatcattggtgcaaatatgaga
acttacttactggaaaaatcaagggtggtgtttcagcgtgatgatgatcatctgaaagta
ttttctgaacttttggggatcaagctggaggagatggctcatggactgtgccacagaaaa
attgctactacctcagacactgtgatcaaacccatgaccaagggtcaagcaatcaatgcc
agagatgctttggctaaacacatctatgctcatctgttcagctgcattgtggatcacatc
aacaaggctttgcagttttctggcaagaagcatacgtttattggcgttctggacatttat
gggtttgaaacctttgatgtgaatagctttgaacagttctgtattaattatgccaatgaa
aaactacagcaacaatttaacttgcatgtgtttaaactggagcaagatgaatacatgaaa
gaagacattccatgggcactgatagaattcaatgacaaccaaccttgcattgatttgata
gaagctaagatgggtatactggagctattggatgaggagtgcctgttgccgcaaggaaca
gaggaaaactggcttcagaaactgcagaataattacttaaataaaaatcctctctttgag
aagcctcgaatgtcaagtaaagccttcatcatcctgcattttgctgacaaggtgcaatat
gaatgtgacggatttcttgaaaagaacagggacacgttatatgaagaattgattaatgta
ctgaagaaaagtaagttgagtctcctagctgatttctttcaagaaaatgaacagtctaca
gggagcttgaagccaaatattaaagtcaggccggcaagaccagggtttaaatccttcaac
aaacagcaccggacaactgtcggtagtaagttccgtaattctctgcatctactaatgaac
accctcaatgctacaacacctcactacgtgcgttgcattaagccgaatgatttgaagctg
cagtttgagtatgattcaaagagagttgttcaacagcttagagcctgtggtgttctggaa
actattcggatcagtgcacagagttatccttccaggtggacgtactttgagttttttagt
cgctaccgcattctgatgtcacaacaagaccttgcattagatgataaaaaacagatctgc
aaagaagtcttaaagcatttaattcaggatccaaaccaataccagtttggtaaaaccaag
attttctttcgcgcggggcaagtggcatatttggaaaaactgcgtgcagataaactgaga
gctgcttcagtcactatacagaagaatctgcgatgctggattcagcggaaaaagttccta
aaaatgaaacgagctgctatcatcattcagcagtatgttcgtggggaacgtgctgtacga
cgtgtattgaatgcagctattttaaaacaatcctgggctgcagttataatccaaaaacac
tggcggcgattttcagtgtctcatcattaccacctcattctcaaggctatcatcagaatt
cagtctttcacccgaggctggttagcaagaaggcaatataaaaagatgctgcaagatcag
aaagccttagtaattcaaaagcacgtccgcgcttggttggtaagacgcagatatcaaagt
atacggcgttttgttttgaacatccagctctcatttcgtgttaaacaactccacaagaaa
ctggatgagcagagcaaagagaacaaggggttgttggaacgtttgacacatctgtctaca
attcactcagctgatctcaacaaatatcaaaaacttgaggaggagctgcagaaagcagtg
acacaaaagcagttcattgaggaacaagtaaagaaatccaagggccagactgagcagacg
ctgtcagagtttagaaagcaaacattatcactacaagcacaaaaccagaaactggagaag
caacatcaggaacagacccaagcattgaaagaaaaaatgaatgaaataacatgccagcat
ctcggtgatttagaaagggaagaacagcggaggagaacattggaaaataattttcagact
cagaaagagaattatgaaaagcaaatcaaagcactgattgatgaaataaaacatctacaa
gaggaaagaatccagttacaggagcagattcaagaggagtacctgataaatgacggtctg
cgtaaggatttggcccaactggctgatgaagcactagtaattccaaaacttaaaggagac
attgcaactcttgaaatgaagaaccaagatttggatatgtgcctgcaaaagcaaagaaaa
gaaatgagagaaaaagttgaagaaattacaaaacagctccttggaggtttagagggtgag
gagctacgaaagagactttctccagaggacatggagcagctaaatgaagatggagagctc
tggtttgcatatgaaggattgaaaagagctaccagagtgatggaaatgcatattcagtct
cagaaagagaactacgagaaagaaatcgaggaactcagttttagaattgatcagctctgt
gaagagacaacgcatctccaacaaaaagtcgaagcagagaatgacactaatgagaccatt
cggcaggaagtgactagactggctaaagaaaatctggtcataccagaattcaaactccaa
atcttagagctgcaaaagcagaaacaagacattgagaagcacttacaaggacaggttgtg
gaaatgaaagaaaaaatggaagaagttactgatcaattacaaggcaatcttaaagaagaa
ggattccaaagaagattggtagaaatccagaaagctaactgtgccaaagaaaatatggaa
ttacttgataaagtgagaaaacttgaaaatgagaatcatcagctactgaattggacccaa
gctgatagtgcagccagtaacagaatgaagcaagaagcatctcaattaacattggaaaac
tgggatctggaggaacgtcttgatcagaaagaaaagcaaatcaggaagttgcaacatcag
attaaatccttaaccaaaacaattgatagaggaaatcgagccaatggaaaagtgagtccc
tttgtgaagaaggagttccttggcatgttggaatgtaaaactgaggatgaagaaaagctc
ataaaaaatctaattttggacctaaaaccacgtggtgtggttgtaaatatgattccagta
ctgccagcaagtatcctgttcatgtgtatacgttacgctgatgatagtaatgatgctgaa
atgctgaaatccctgatgaactctctacttgatggtattaaaacagtcactaagaatcac
agtgaagattttgaaatgctgtcattttggctttccaacagtgtccattttcttaactgc
ttaaagcagtacagtggagaggaggagtttatgaagtacaacactcctcaacaaaatagc
caatgtctgaaaaactttgacctgtccgaatatagacagattctgagtgacttggccatt
cacatttaccaacaactcattcaagtgatggaggatgaccttcaaccaatgatagtaccg
ggaatgctagaacatgaaagcctgcaaggcatttcgagcatgaagccaactggacttcgg
aaaagatcttcaaattatcaagaagaagtggacaagtacacaatatcttccattttgcag
cagctcagctactacttcaccaccatgtgtcagcatgacatggacactgatctgaccaaa
caggcagttaaacagctcttctttctaattggaacaatcacccttaataatctcttcctg
cgcaaagacatgtgctcatgcagaaaagggatgcaaataagatgtaatattagttacttg
gaagagtggctgaaggataagaatatgcagagtagcaatgctaaagagaccctggaacca
ctctctcaggctgcctggctacttcaggttaacaagaccacagatgatgatgtgaaagaa
atatgtgcaaaatgtacatctctttcagctgtgcagattgtcaagattttgaattcctac
acgccaattgatgattttgagaaacgtgtggcaccatcctttgtgcgcaaagttcagtca
caactgaacagtcgtggagatggatcaacattgataattgatgccaaatatcattttcaa
gtgacttttccatttagtccatctccacaagcattggagaccatccagattcccagtagc
ttcaaattaaacttccttactcggatctaa
DBGET
integrated database retrieval system
