Chiloscyllium plagiosum (whitespotted bambooshark): 122540845
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Entry
122540845 CDS
T08871
Symbol
myo5aa
Name
(RefSeq) unconventional myosin-Va
KO
K10357
myosin V
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122540845 (myo5aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122540845 (myo5aa)
04131 Membrane trafficking [BR:
cpla04131
]
122540845 (myo5aa)
03029 Mitochondrial biogenesis [BR:
cpla03029
]
122540845 (myo5aa)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpla04812
]
122540845 (myo5aa)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
122540845 (myo5aa)
mRNA cycle factors
P-body specific factors
122540845 (myo5aa)
Membrane trafficking [BR:
cpla04131
]
Others
Actin-binding proteins
Myosins
122540845 (myo5aa)
Mitochondrial biogenesis [BR:
cpla03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
122540845 (myo5aa)
Cytoskeleton proteins [BR:
cpla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
122540845 (myo5aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
HTH_17
AAA_22
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
122540845
NCBI-ProteinID:
XP_043532997
LinkDB
All DBs
Position
36:complement(15327004..15505394)
Genome browser
AA seq
1662 aa
AA seq
DB search
MDWDFVYVKFARVWIPDTEDVWKSAELLKDYKPGDTVLHLKFEDEQETQYNIDPQTKELP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFMDSKLIYTYCGIVLVAINPYEQLPIYG
EDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASETNVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMR
TYLLEKSRVVFQAEDERNYHILYQLCASKHLPEFKALRLSNAENFHYTNLGGNPMIEGID
DAKEMMNTRQACSLLGINDSYQMGVFHILGAILHLGNVTIKSNERDADNCFIPPNTEHLI
IFCELLGVDYEQMSHWLCHRKIVTGSETYIKPMPKFQAINARDALAKHIYASLFNWIVLH
VNQALQASVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYM
KEQIPWTLIDFYDNQPCINLIEAKLGILDLLDEECKMPKGSDDTWAQKLYNTHLNKSALF
YKPRLSNKAFIIQHFADKVEYQCEGFLEKKSSHYSFPAPPPPPHCKDLTSVVRVIAAGRF
WITVGPLLCSSYAQFLRRTRAAIIIQKYQRMYAAQQKFLRIRSATIIIQSFVRGFHGRRQ
YKAILREQKATILQKHVRGWMAKLKYRRIQHAIVYLQCCYRRMMAKRELKKLKIEARSVE
HYKTLNIGMENKIVQLQCKVNNQTKEIKSLLEKLSNLEVIYTNATEKLRTEVDRLRVNEE
NAKVSSNKITSLLEEIAILRKELKETQAQKKHLEEGAMKYKEETELMVSQLKEQNSLLKK
EKEDLNLQIQEQAKEITESMEKRMEEETKQLQIDLNDERSRYQSLLNEFCRLEERYDNLK
EEISLVNVLKPGHRRTDSTHSSNESEYTYNSLLSSEPGEAEDGTRRPEEFPEQRGALDMS
LFLKLQKRVTELEQEKQALQEELDRKEEQALRSKAKEAEDQQVKARGAELEYESLKRQEL
ESENKKLKNELNELHRALNEKASPHVTAPGSPAYKVLLDQLTASSEELEVRKEEVLILRS
QLVSQKEAMAHKESKETMTDPMVLLEDVRKMKDQGEITQAYLGLKETNRLLESQLQGQKK
NYENELEILRGEVQNLKEEINRQQQLLAQNLQLPPEARIEASLQHEITRLTNENLYYEEL
YADDPMKYQFYRISLYKRIIDLMEQLEKQDKIVRKLKKQLKVFAKKIGELEVGQTENVSP
AQLADEPIRPVNIPRKEKDFQGMLEYKKDDELKLIKNLILELKPRGVAVNLIPGLPAYIL
FMCVRHADYINDDQRVRSLLTSTINGIKKILKKRSDDFEIVSFWLSNTCRFLHCLKQYSG
EEAFMKHNTPRQNDHCLRNFDLAEYRQVISDLAIQIYQQLTKVMENILQPMIVSGMLEHE
TIQGVSGLKPTGLRKRTSSVADEGTYTLDSIVRQLNNFHSTMCQHGMDPELIKQIVRQMF
YIIGSVTLNNLLLRKDMCSWSKGMQIRYNVSQLEEWLRDKNLQNSGAKETLEPLIQAAQL
LQVKKKTDEDAEAICSMCNNLTTAQIVKVLNLYTPVNEFEERVTASFIRTIQVRLQNRKD
SPQLLMDAKFIFPVTFPFNPSSLALESIQIPSSMNLGFLLRV
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atggattgggattttgtgtatgtgaaatttgccagggtgtggatccctgatacagaggat
gtctggaaatccgcggagcttctgaaagactacaagccaggagacacagtgcttcatctg
aaattcgaggatgagcaggaaactcaatataacatcgatccacaaacgaaggagcttcca
cccctgcgaaaccctgacatccttgtgggtgaaaatgacctcacagcactcagttatctc
catgagccagctgtgctgcacaaccttaaagtacgcttcatggattcgaagctcatctat
acttactgcggtattgttttggtagccatcaatccttatgaacagttacctatctatgga
gaagatatcatcaatgcctatagtgggcagaacatgggagacatggatcctcatatcttt
gctgtggctgaggaggcatacaagcaaatggcgagagatgaacggaatcaatcaatcatt
gttagcggagagtctggagcagggaagactgtctcagctaaatatgccatgcgatacttt
gcgacagtcagcggttctgccagtgagactaatgtagaagagaaggtcctggcttcaaac
cccatcatggagtcaattggaaacgcaaagacgaccaggaatgataacagtagtcgattt
gggaaatacattgaaattggatttgacaaaaggtatcgtatcataggagctaacatgaga
acctacctgctggaaaagtcgagagttgtgtttcaggctgaggacgaaagaaattatcat
attctgtaccagctgtgtgcctctaaacatttaccagaattcaaagctctcaggctgagc
aatgctgaaaacttccactacacaaatttgggaggtaatccgatgattgagggaatagat
gacgccaaagaaatgatgaataccaggcaggcttgctctttactaggtattaatgactcc
taccaaatgggagtcttccatattcttggagcaattcttcacttgggaaacgtgacaatt
aaatcgaacgagcgtgatgctgacaactgttttatcccgccaaacactgaacacctgatc
atcttctgtgagctgctgggcgtggactatgagcagatgtctcactggctgtgtcacagg
aagattgtcactggctcagagacctacatcaagcccatgcccaaattccaagccatcaat
gccagagatgctctggcaaaacatatctatgccagtctcttcaactggattgtactccat
gtcaaccaggctctgcaagcttcagtaaagcaacattcatttatcggtgtgctggatata
tacggatttgagacttttgaaataaacagttttgaacaattctgcatcaattatgctaac
gaaaaattacagcagcagtttaacatgcatgtcttcaagctagagcaggaagagtacatg
aaggagcagattccatggacactcatagatttttatgacaatcagccttgtatcaaccta
attgaagctaaacttggcatcctggacctattagatgaagagtgtaagatgcccaaagga
tctgatgacacgtgggctcagaagctttataacactcacttaaacaagagtgcgctgttt
tataaaccacgcttatcaaacaaggccttcatcatccagcactttgctgacaaggttgag
taccagtgtgagggcttcttagaaaagaagagcagccattactcgttccctgcccccccc
cctcccccccactgcaaagatttaacctccgttgtcagggtgatagctgcaggaagattt
tggataacagtgggccctttgttgtgttccagctatgctcagttcctccgcaggaccaga
gcagcaatcatcatccagaaataccagcgaatgtatgcagctcagcaaaagttcctgcgg
atccgatcagcgaccattattatccagtcatttgtgcgaggctttcatggaaggcgacaa
tacaaggcgatcctccgggaacagaaagctaccatccttcagaagcacgtacgtggctgg
atggcgaaactcaaatacaggaggatccagcacgccatcgtctacctacagtgttgctac
cgccgcatgatggcaaagcgggagcttaagaaactgaagattgaagcaagatcagtagag
cactacaagaccctcaacattggcatggagaacaagattgtgcagctacagtgcaaagtc
aacaaccagacaaaagagattaaatcgctgctggagaagttgagcaatttggaggtcatt
tataccaacgctacggagaagttgcggacagaggtcgatcggctgcgtgtaaacgaagaa
aatgccaaagtgtcctccaacaagataaccagcctgttggaggagatcgcaattctacgg
aaggaactcaaggaaacgcaggctcagaaaaaacaccttgaggaaggagcaatgaaatat
aaagaggaaacagaactgatggtgtctcagcttaaggagcagaacagtttactgaagaaa
gagaaagaggatctgaatcttcaaattcaggaacaggccaaagagataacagagtcaatg
gagaagagaatggaggaagagaccaaacagcttcagattgacctcaatgatgagaggtcc
aggtaccagtctcttcttaatgagttctgccgattagaggaacgttacgataacttgaaa
gaagaaatatctttggttaatgtgttgaagcctggtcacagaaggacagattccacgcac
agtagtaatgagtctgagtacacctacaactccctgctttcctctgagccgggggaagct
gaggatgggacacgaagaccagaggagtttccagaacagagaggtgctctggatatgtcc
ctgttcctgaaacttcagaagcgtgtgactgagctggaacaggagaagcaagccttacag
gaagaactcgatcggaaagaggaacaagcattacgaagcaaagcaaaggaagcggaagat
cagcaagttaaagctaggggagctgagctggagtatgaatccctcaagaggcaagaacta
gagtctgagaataagaagctaaagaatgaactcaatgaactgcacagagccctgaacgag
aaggcttccccacatgtgacagcccctggttctcctgcttacaaagttctacttgaccag
ttgactgcatcaagtgaagagctggaggttcgtaaagaggaagttctcattctgcggtcc
cagttggtcagtcaaaaggaagcaatggcacataaggaaagtaaggagacgatgacagac
ccgatggtcctcttggaggatgtacgtaagatgaaggatcaaggtgaaataacccaagca
tacttgggacttaaagaaaccaacagattgctggaatctcagcttcagggtcagaaaaag
aactatgagaatgagctggagatcttacgcggggaggtgcagaatttgaaagaggagatc
aatcgtcagcagcagttattggcccagaacttgcaactgcccccagaggcccgcattgag
gccagtctgcaacacgagataactaggttaaccaatgaaaatctttattatgaggagtta
tatgcagatgaccccatgaagtatcagttctacaggatttcgctttacaaacggatcatt
gatcttatggaacaacttgaaaaacaggacaagattgtccggaagttgaaaaagcagctt
aaagtatttgcaaagaaaattggagaactagaagtgggtcagacagagaacgtatctcca
gctcagctggcagatgaacccatccggcctgtgaatattccaaggaaagaaaaggatttc
cagggaatgttggagtacaagaaggatgatgagcttaagcttatcaagaatcttatctta
gagctaaagcctcgtggtgtggctgttaacctgatccctggattgccagcgtacatcctg
tttatgtgtgtacgtcatgctgattatattaatgatgaccagagagtccggtccctactg
acatcaactattaatggcatcaagaaaatcttgaagaaaagaagcgatgactttgaaatt
gtgtcattctggttgtccaacacttgtcgtttcttgcattgtcttaagcagtacagtggg
gaagaggcatttatgaagcacaacactcctcgacagaatgatcattgcttgagaaacttt
gaccttgctgagtacaggcaggtcataagtgacctggcaattcagatataccaacagctg
accaaggtcatggaaaatatcttgcagccaatgatcgtttcaggtatgttggaacatgaa
actattcagggagtatctggcctaaagcccacgggtctacggaagaggacttccagtgtt
gcagatgaaggtacctacactctagattccattgtccgacaactgaataatttccattcc
acaatgtgtcagcatggcatggatccagagctcatcaaacagatcgtcaggcagatgttc
tacatcatcggttccgtcaccctcaacaacttgcttcttcgcaaggacatgtgttcatgg
agcaaaggaatgcagatcaggtacaatgtcagccaactcgaagagtggctgcgggacaag
aacctgcagaatagtggggcgaaagaaactcttgaacctttaattcaggctgcacagctc
ctgcaggtgaaaaagaagactgatgaggatgcagaggccatttgctccatgtgtaataat
cttaccactgctcagattgtgaaagtcctaaatctgtacactcctgttaatgagtttgaa
gaacgtgtcactgcctcattcatacgcactattcaggttcgtttacaaaatcgaaaagac
tctcctcagcttctaatggatgcaaaattcatatttccagttacattcccattcaaccca
tcttctttagcattggagagcattcagattccaagcagcatgaaccttggattcctgttg
cgtgtctga
DBGET
integrated database retrieval system
