KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122540859
Entry
122540859         CDS       T08871                                 
Symbol
snrpa1
Name
(RefSeq) U2 small nuclear ribonucleoprotein A'
  KO
K11092  U2 small nuclear ribonucleoprotein A'
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122540859 (snrpa1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpla03041]
    122540859 (snrpa1)
Spliceosome [BR:cpla03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    122540859 (snrpa1)
 Complex B
    122540859 (snrpa1)
 Complex C
   U2 SnRNP specific factors
    122540859 (snrpa1)
SSDB
Motif
Pfam: LRR_9 LRR_4 LRR_8 DHU1_N LRR_NXF1-5 LRR_14
Other DBs
NCBI-GeneID: 122540859
NCBI-ProteinID: XP_043533005
LinkDB
Position
36:complement(35990177..36027365)
AA seq 241 aa
MTPVQNEGLRIGGYKIPVIENLGATLDQFDCIDFSDNEIRKLDGFPLLRRLKSLLLNNNR
ICRIGEGLEQALPNLRELVLTNNNLQELGDLDTLSTIKSLTFLSILRNPVTSKKHYRLYV
IHKVPQVRVLDFQKVKLKERQEADRMFKGKRGAQLAKDITKKTKTFTPGAGLSGEKKKTG
PSAPEVEAIKNAIANASTLAEVEKLKGMLQAGQIPGRDRKSGPTDEVEEEDMEEDPVTNG
N
NT seq 726 nt   +upstreamnt  +downstreamnt
atgacacctgtgcagaatgaaggcctgcgaattggtggttacaagattccagttatagag
aatctgggggcgactctggatcagtttgactgtattgacttctctgacaatgaaatccgt
aaactggatggtttcccgttattgcggagattgaaaagtttactgctgaacaacaaccgt
atctgtcggataggtgaaggtctcgagcaggcgttgcccaatctgcgggagttggtactc
accaacaacaatttacaggagctgggtgatctagatacgctttcaaccatcaaatctctt
acgttcctgagcatcctgaggaacccggtaacaagcaagaagcattatcgtctatatgtg
atccataaagttccacaggttagagtcctggatttccagaaagtgaaactgaaggaacgt
caggaagcggatcgaatgttcaaaggcaaacgtggggcgcaacttgcaaaggatattacc
aagaaaacaaagactttcacaccaggtgcaggattgtcaggagagaagaaaaagactggt
ccttctgcacctgaagtagaagcaattaagaatgctattgccaatgcatcaacactggct
gaggtggagaaactgaaaggcatgctgcaggctggacagatcccagggagggacaggaag
tctggtcctactgatgaagttgaggaggaagatatggaagaagatccagttaccaatggc
aattaa

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