Chiloscyllium plagiosum (whitespotted bambooshark): 122540861
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Entry
122540861 CDS
T08871
Symbol
vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04140
Autophagy - animal
cpla04148
Efferocytosis
cpla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122540861 (vps11)
04148 Efferocytosis
122540861 (vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122540861 (vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122540861 (vps11)
Membrane trafficking [BR:
cpla04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
122540861 (vps11)
Hops complex
122540861 (vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_PEP5_VPS11
PEP5_VPS11_N
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-rbx1
TPR_GEMI5
zf-C3HC4
zf-C3H2C3
zf-RING_5
GHL13
ISG65-75
zf-ANAPC11
YqbF_HeH
Spectrin_7
Beta-prop_EML_2
zf_RING_Vps8_fungal
zf-RING-like
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
122540861
NCBI-ProteinID:
XP_043533007
LinkDB
All DBs
Position
36:37322241..37362672
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AA seq
967 aa
AA seq
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MAAFLQWRRFVFFDKEPLLERGEAAAAEFRCPGDSAISVCTSGRGSLVLGDILHLSPGRG
GDGVTAHPPKSNIDHVLCSWRITGVLCLWLVFYENTLICTRNLQFCQLELIIMNWILNKL
GVRGLQYFYFVFTFQVKVWNLEKRDSSGNPLCTRIFSAIPGNKPTEVSCLTVHENLNHMA
IGFTDGSVVLKKGDITRDRHSKTDVLAEGTYPITGLGFQQSGKQTHLFVVTTENVKSYNV
SLKEFPMVELDNHGCSLRCSALCDPSQDNQLIVAGDDCVYLYQPDERGPCFAFDGQKQIV
HWYRGYLLIVSQEKKASKTDLVGGNEQSSEKQILTIYDLDNKFIAYTAAFDDIVDVLSEW
GSLYVLTNNRKISVLQEKDTQTKLEMLFKKNLFVMAINLAKSHHLDNDGLADIFRQYGDH
LYVKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHNLTAYLQALHRQSLANEDHTTLL
LNCYTKLKDSSKLEEFIKTSDNEVHFDVETAIKVLRQAGYYRHAVYLADKHSHHEWYLKI
QLEDIKNYQEALCYIGKLPFDQAERNMKNYGKTLMHHAPDETTELLKILCTDYRASGELP
AETESAGRNKNKANSEEFISIFANNPRELKNFLEHMIQVQANSPQGVYDTLLELRLQDWA
HEEDVQVKKRLQEDAMSLLKSGLFKAVFDKALVLCQMHNFKDGVLYLYEQGRLYQQIMHY
HMQNDEYAKVIETCERYGEQEACLWEQALGYFARKEEDCKEYISSVLRYIDRNNLMPPLL
VVQTLAHNSTATLSVIKDYLINKLQQESDHIAEDERRIKQYREETKKIQEEIEELKSSAK
IFQKPKCSMCNSPLELPSVHFLCGHSFHQHCFESYAEHDSECPTCMPENRKVMDMIHAQE
QKLDLHDKFQHQLKCSKDGFSVIADYFGRGVFNKLTLITDPLPGRAGTANLDVGLQRDLL
IHTKRTS
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggctgccttcctgcaatggagacggttcgttttcttcgacaaggagccgctgctggag
cggggggaggcggccgccgccgagttccgctgccccggagactcggccattagcgtctgc
accagcggcaggggcagccttgtgctgggggatatccttcacctgagcccggggagggga
ggggatggggtcactgctcaccctccaaagtcaaatattgaccatgttctctgctcctgg
agaataactggtgttttgtgtttatggctggttttctatgaaaacactttgatttgtaca
agaaatttgcagttttgtcagttggagttaataataatgaactggattctcaataaacta
ggagttcgtggacttcaatatttttattttgtttttacattccaggtgaaggtctggaat
ctggagaagcgggatagcagtgggaatcctctctgcacacggatcttttccgcgattcct
ggcaacaagcccacagaagtctcatgcctcactgtccacgagaacctgaaccacatggca
attggcttcacggatgggagtgttgtcctgaagaaaggagacattactcgtgacagacac
agcaagactgatgttctagcagaggggacctaccccatcactggtcttggattccaacag
tctgggaaacaaacccatctctttgtggttacaacagagaatgtcaagtcgtacaatgtt
tctctgaaggagttccctatggtggagctggataaccatggctgcagcctacgttgttca
gccctctgtgacccctcgcaggacaaccagttgattgttgccggcgatgactgtgtgtat
ctttaccagcctgatgagcgtgggccctgctttgcttttgatggccagaagcagattgtg
cactggtaccgtggctacctcctcatcgtgtcgcaggagaagaaagcctccaagactgat
cttgttggaggtaatgagcagtcgtcagagaagcagattctcaccatctatgacctggat
aacaaattcattgcatacacggcagcttttgatgacattgtggatgtgttgtctgagtgg
ggctcactgtatgtgctgaccaacaatcgtaaaatcagtgttctgcaggagaaggacaca
cagacaaaacttgagatgttatttaaaaagaacctgtttgttatggccatcaatttggcg
aagagtcaccatttagataacgacggactggcagatatcttccgacagtacggtgaccac
ctgtatgtgaaaggggatcatgacggtgccatacagcaatatatccgcaccatcgggaag
ctggagccatcatatgtgatacggaagtttctggatgcgcagcggatccacaacctgaca
gcatatcttcaggccctgcaccgtcagtcactggccaatgaggaccacacaacgcttcta
ctcaactgttacacgaaactgaaagacagctccaaacttgaggagttcatcaaaaccagt
gataatgaggtccactttgatgttgaaactgcaatcaaggtgctgcgtcaggcaggttat
tacagacatgctgtctatctggctgataaacactctcaccacgagtggtacctcaagatc
cagctcgaggatatcaagaactaccaggaagccctgtgctacattgggaagctgcccttt
gaccaggcagagaggaacatgaagaattatggcaagacactcatgcaccatgctccagat
gagaccactgagctgctgaaaatcctgtgtacagattacagagccagcggagagctacca
gcagagacagaatctgcaggaagaaacaagaataaggcaaactctgaggagtttatttca
atctttgccaacaacccacgggagctgaagaatttcttggagcatatgatccaggttcag
gcgaactccccacagggtgtgtacgatactctgctcgaactcaggctgcaggactgggcc
catgaggaggatgttcaggtgaagaagcgactgcaggaagatgcgatgagtctgttgaag
agtggtttatttaaagctgtctttgacaaggcgttggtgctgtgccaaatgcacaatttc
aaagacggagtgttgtacctgtatgagcagggccgactataccagcagataatgcattat
catatgcaaaacgatgagtatgccaaggtgatcgagacatgtgagcggtacggggagcaa
gaggcctgcctctgggaacaagcacttggatactttgcacggaaggaggaggattgtaag
gaatacatcagcagtgtgctgaggtacatcgacaggaacaacctgatgcctcccctgctg
gttgtacagacactggctcacaactcaacagccacactctcagtcattaaggattatctc
attaataagctacagcaagaaagtgaccacattgctgaagatgagcgaaggatcaaacaa
tatcgcgaagaaaccaagaaaatccaggaggagattgaagaactaaaaagcagtgcaaag
atctttcagaaacccaagtgcagcatgtgtaacagtcccctggaactgccctctgtccac
ttcctgtgtggccactccttccaccaacactgctttgagagttatgcagagcatgattcg
gaatgtccaacctgcatgcctgaaaaccggaaagtaatggacatgatccatgcccaggaa
cagaagctggatcttcacgacaagttccaacatcagctgaagtgttcaaaggatggattc
tcagtcattgcagattacttcggccgtggggtcttcaataaactgacactaatcacagac
cctctccctgggagagcaggcactgcaaaccttgatgtgggactccagagggacttgttg
atacacacaaagagaacatcttaa
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