Chiloscyllium plagiosum (whitespotted bambooshark): 122540868
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Entry
122540868 CDS
T08871
Symbol
dis3l
Name
(RefSeq) DIS3-like exonuclease 1 isoform X1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122540868 (dis3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122540868 (dis3l)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
122540868 (dis3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
CSD2
Rrp44_CSD1
OB_HELZ2
Rrp44_S1
Motif
Other DBs
NCBI-GeneID:
122540868
NCBI-ProteinID:
XP_043533020
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All DBs
Position
36:116270..169974
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AA seq
1058 aa
AA seq
DB search
MAPPLASDNVMIKTEKVLHLRSCKGKSVRVVREHYLRGSVPCNSSLCQAECHNEGKLLSE
SATHYLIPDWKVVQDYLEILEFPELRGIVFMQTACQAVQHQKGRRHYNKLRNLLKDARHE
CVLFFNEFQLYSYVPREHGESLEKWQTRCIYYATVWYYNHLAGLMPVVMVTEDPEAIQKY
GSETEGVFVISFKSYLENFWPDLEAVHQLYDSIVQSRKERESENQEKNRKEYSEHLPLEI
LEAGIKSGRYVQGVLNVNKHRSQLEAFVRTQGFTNKKSELEMDILICGTKARNRAIQGDV
VAVELLPRNEWKGRVSVLCEKESEEKTAEETESEPMATGKVVGIIQRNWRDYVASFPPKE
DIQSQGKNVRKILVTPWDYRIPRIRISTQQAESLQDCRIIVRIDSWDSTSLYPNGHFVKV
LGRAGDLETEIAAILVENNISVNPFSEAQLREMPVNTPENPWKIDTEEQAQRVDLRNTHL
VFSIDPKDCEDVDDALSVRRLVNDNLELGVHIADVTHFVKLNSNTDLEARSRATTCYLAD
RRYDMLPSILSADLCSLLGGADRYAVSVLWELDKTNYEVLKVWFGRTIIKSAYKMYYEAA
QALLDGDLHIMDDIPELQGREEKDKHRILNDLIWAVEKLTEIARHIRAKRALGGALELEG
MELRVQLDEKKNISDLVPKQPLEVHETVAECMILANHWVAKKITEKLPHQALLRCHPPPQ
QEFFAQLIDCAKAKGFKIDTRSNKALADSLDMAEDPDDPQVNKLLRSMATQAMSNAVYFS
TGSCSEDEYYHYGLALDKYTHFTSPIRRYADIVVHRLLMAAIMKDEKLEPEDSLLSNKDL
AELCQHINNKNRAAQYVQKQSIELFQCMYFKDKDPSDERCIADGIIYSIRANGVLVFVPR
YGIKAPAFLKNKEGLVISAKSDGSCVWKPGCLKRLRDKIISTTVDGGSVTFSLFDHITVR
IFELSSQSHPDSIKLDIISNQPYNKTNTEPMHETSHSSKTDLIRDVIRSVEEAQLAQEHA
KSTSVRDEDKEYCQTKGNSLYLLLEEIKELALLDVAVG
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggctcctccgctggcttccgacaacgtgatgataaaaacggagaaggtgctgcacctg
aggagctgcaaaggaaaatcagttcgagttgtgagggagcattacctcagggggtcggtt
ccctgtaacagttccctctgccaggctgagtgccacaatgaagggaaattgttgtcagaa
agtgcaactcattatttgatacctgactggaaagtggtgcaggattatttggagatactt
gagtttccagaattgagaggcattgtcttcatgcagacagcttgtcaggctgtccagcac
cagaagggacgcagacattacaacaaattgcggaacctgctgaaggacgctcgtcatgaa
tgtgtgttgttcttcaatgaattccagctgtactcatatgtaccgagagagcatggagaa
tctctagaaaaatggcagaccaggtgtatttactatgccacagtctggtattacaatcat
cttgcaggattgatgccagttgttatggtaaccgaggatccagaagccattcaaaaatat
ggaagtgaaacagaaggagtatttgtcatatcatttaagagttatttggagaacttttgg
cctgacttggaagccgtacatcaactgtacgactctattgttcagtctcggaaagaaaga
gaaagtgaaaatcaggaaaagaataggaaagaatattcagaacatctccctcttgaaata
ctggaagctggcatcaaatccgggagatatgtgcagggtgttttaaatgtcaacaaacac
agatctcagttggaagcctttgttcgtactcaaggattcactaacaaaaaatcagaactt
gaaatggacatcctcatctgtggcactaaggctcgaaaccgtgccattcaaggtgatgta
gtagctgtcgaattgctgccaaggaatgaatggaagggaagagtttctgtgttatgtgag
aaggagtctgaggagaagacagctgaagaaactgaaagtgaaccaatggctacaggtaaa
gtggttggaattattcagaggaactggcgagattatgttgcatcctttccaccaaaagaa
gatatacaatctcagggtaaaaatgttcggaagatcctagtgacaccttgggattataga
attcctagaataaggatcagcacccagcaagctgaatccctgcaggattgtcgaattatt
gtacgcattgattcctgggattccacttctctttatcccaatggacactttgtgaaggtt
cttggaagagctggtgaccttgagacagaaattgcagctattcttgttgaaaacaatatt
tcagttaaccctttctctgaagcccagctgcgtgagatgccagtgaacactcccgagaat
ccttggaagattgatacggaggagcaagcccagagagttgatttaaggaacactcatctg
gtgttcagcattgaccccaaggattgtgaggatgtggatgatgcattatctgttcgcaga
ttagttaatgacaatctagagctgggagttcacattgctgatgtcacacactttgttaaa
ttaaattcaaatacagatctggaagctcgatcaagggcaacaacttgttacctcgcagat
cgtcgttatgatatgttaccttctatcctgagtgctgacctgtgttctttacttggaggt
gctgacaggtatgcagtcagtgtgttatgggaattggacaaaactaactatgaggtcctt
aaagtgtggtttggacgaaccattataaagtctgcatacaagatgtactatgaagctgcc
caagccttgttagatggggatctccatattatggatgatatccctgaactccaaggacgt
gaagagaaagacaaacatagaatattaaatgatctgatatgggctgtagagaagctgact
gaaatagctcgccacattcgagcaaaacgtgcacttggcggtgcactggagctggagggc
atggaattacgagtacagttagatgaaaagaagaatattagtgacctggtcccgaagcag
ccactggaagtgcacgagactgtagcagagtgtatgattctggccaaccactgggtggca
aagaagataactgagaaattacctcatcaagccttgctgcgttgtcatcctccaccacag
caggaattcttcgctcagctgattgattgtgcaaaagcaaagggattcaaaatagataca
cgctccaacaaggctttggcagattctctggatatggcagaagatccagatgatcctcag
gtgaataagctgttacgatccatggccacacaagcaatgtccaatgctgtttatttttct
actggctcctgctcagaggatgaatattatcattatgggcttgctctggacaaatatact
cacttcacttctccaatcagaagatatgcagacatagtggtgcatcgactactaatggca
gctataatgaaagatgagaaattggaaccagaagattcattactcagcaacaaagactta
gcagaattatgtcagcacatcaacaacaaaaacagggctgcacaatatgtgcagaaacaa
tctattgagttatttcagtgcatgtactttaaggataaagacccttcagacgaacgttgt
atagcagatggcatcatatactcaattcgggcaaatggcgtgctggtttttgtaccaagg
tatggcataaaagctccagcattcctgaagaataaagagggtcttgtgatctcagcaaag
tctgatggatcatgtgtctggaaaccgggctgtctcaaacgccttagagacaaaattatt
tctactacagtggatggaggatcagttactttctctctgtttgatcacatcactgtaaga
atatttgaactctcatctcaatcacatcctgacagcatcaaattggacatcatcagcaac
caaccttataataagaccaacacggagcctatgcacgaaacctcacacagttcaaagact
gacttgatacgggatgtaatcagatctgttgaagaggcacaacttgctcaagagcatgca
aaaagtacatcagtcagagatgaagataaggaatattgtcaaaccaaaggcaacagcctc
tatttgttattagaagaaattaaggaactggcacttctagatgttgcagtcggataa
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