Chiloscyllium plagiosum (whitespotted bambooshark): 122540878
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Entry
122540878 CDS
T08871
Symbol
rasgrf1
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 1 isoform X1
KO
K04349
Ras-specific guanine nucleotide-releasing factor 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04010
MAPK signaling pathway
cpla04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122540878 (rasgrf1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122540878 (rasgrf1)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
MYO6_lever
IQ
DUF641
Motif
Other DBs
NCBI-GeneID:
122540878
NCBI-ProteinID:
XP_043533034
LinkDB
All DBs
Position
36:697744..789689
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AA seq
1253 aa
AA seq
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MQKGIRLNDGHLSSLGVLAKKDGTRKGYLSKRSSDNTKWHNKWFALLHNMLFYFENDCAS
KASGLYLLEGCVCERAPSPKPSLTAKESLEKQYYFTINFGHDAQKALDLRTEDVKECDDW
VAAIGHASYRNLATEHESLMQKYLHLLQIVETEKTVAKRLRHQIEDQEIEVERLKSEIAS
LLKNNERIQLTQPAAQNDEDVDIRKIKKVQSFLRGWLCRRKWKTIIQDYIRSPHAESMRK
RNQVVFSMLEAEAEYVQQLHILVNCFLRPLRMAASSKKPPIGHDDVSSIFLNSETIMFLH
QIFYQGLKARVSSWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQILASCKQNRDFDKLL
KQYEAKPDCEERTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERKSLEYAKSKLEELS
RIMHDEVSETENIRKNLAIERMIVEGCEILLDTSQTFVRQGSLIQIPMTEKGKITRGRLG
SLSLRKEGEKQCFLFSKHLIICTRGSGGKLHLTKNGVLSLIDCTLMEDTETTEDEARGLG
QDLEHLDFKIVVEPKDTPSFTVILVASSRQEKAAWTSDISQCIDNIRCNGLMMNAFEENS
KVTVPQMIKSDTSLYCDDVDIRFSKTLNSCKVLQIRYASVERLLERLTDLRFLSIDFLNT
FLHSYRVFTTAGVVLDKLITIYKKPISAIPARSLELFLASSQNNKLLYREPPKSPRASRK
FSSPPPLSISKSSSPIRRRKLSLNIPIITGGKALDLATMTCSANGYASMYSSSSSFSKTA
LDINKLYVSSTYSNKLPDEPETKLDKHEDIGLGKGGAGKTVKEDSESEQALSDEAETETS
PPKSPPTPKKLKGKNPSEFSLFSYNNGVVVTSSREMDNNRSALSATSAFAIATAGANEGT
PTKEKFRRMSLASAGFPADQRICDKEFVIRRAATNRVLNVLRHWVSKHSQDFEANAELKS
QVISFLEEVIHDPELLTQERKAAANIIRTLNQEDSVDHQTILDEIMNVVEEETFENLSAL
EIAEELTLLDHLIFGCIPYEEFFGQGWMKPEKNERAPYIMKTTKHFNDISNLIASEILKS
DDVNVRTAAIEKWVAVADICKCLHNYNAVLVITSALNRSAIFRLKKTWLKVSKQTKALID
KLQKLVSSEGRFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDGLVNFSKMRM
ISHIIREIRQFQQTAYKIEQQTKVARYLLVQSNVMDEETLYEASLRIEPKLLT
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaggaatccggctgaatgatgggcacctttcctccctgggggttctggccaag
aaagatggcaccaggaagggctacctgagcaagagaagctcggacaacaccaaatggcac
aacaagtggttcgccctgctccacaatatgctgttttatttcgagaatgattgcgccagc
aaagcgtctggtctgtacttactggaggggtgcgtatgcgagcgggcaccatcccccaaa
ccatcgcttacagccaaggaatccctggaaaagcagtattacttcacaataaactttggc
catgatgctcagaaagccctggacctgaggacagaggatgtgaaagaatgtgatgactgg
gttgcagcaattggtcatgcaagttacaggaacctggcgacagaacatgagtccctgatg
cagaaatatctgcacctactgcagattgtagagacagaaaaaacagttgctaaacgactt
cgacaccaaattgaagaccaggaaattgaagtggagcggctcaaatctgagattgcttca
ctgctgaaaaataacgaacgtatccaattaacacagcctgcagcacaaaacgatgaagac
gttgacataaggaaaatcaaaaaggtgcagagcttcttgcgaggatggttgtgccgaagg
aaatggaagacgataatccaggattatatccgctcccctcatgccgagagcatgaggaag
aggaaccaggtggtgttcagcatgctggaggctgaagcagagtacgtgcagcagctccac
atcctcgtcaattgcttcctacggcccctgcgtatggcagccagctccaagaaacctccc
attggccacgatgatgtcagcagcatcttcctcaacagtgaaacaatcatgtttttgcac
cagatattttaccagggactgaaagctcgtgtttccagctggcccacgttagtattagct
gacctgttcgacattctcctcccaatgttgaacatctaccaggagtttgtgaggaatcac
cagtacagcctgcagatcctggccagctgcaagcagaacagagactttgataaactcctg
aagcaatacgaagcgaagccggactgtgaagagagaacgctggagaccttcctgacctac
ccaatgtttcagatccccaggtacatcctgacgctgcacgaactgctggcccacacgcct
catgaacatgtggagaggaagagcttggagtacgccaagtccaaactggaggaactttca
cgaataatgcacgatgaagtcagtgagacagaaaatattcggaagaaccttgccattgaa
cggatgatagtggagggatgtgagatcctcctggacaccagccagacctttgtacgacaa
gggtcacttatccaaataccaatgactgaaaaagggaaaattacccgaggccgattggga
tcgctatccctgagaaaggaaggagaaaagcaatgttttctgttctccaaacacttgata
atatgcaccagaggatcaggtggaaaactccatttaacaaaaaatggagtactttcactt
atcgactgcaccttgatggaagacacagaaaccacagaagatgaagctcggggattggga
caggacctggaacacctcgacttcaaaattgtcgtggaaccaaaagacaccccatccttc
accgtgatcctggtggcttcatcacgtcaggaaaaagcagcttggacaagtgacatcagc
cagtgcatagacaacattcgatgcaatggtctgatgatgaatgcatttgaagaaaactca
aaagtcacagttcctcaaatgattaagtctgacacaagcctatactgtgatgatgttgat
atacgattcagcaaaaccctcaattcctgtaaagtgcttcagattcgttatgcaagtgtg
gaacgcttgttggaacgcctgactgatctccgcttcttgagtatagacttcctcaacacg
ttcttgcattcatatcgagttttcactacagctggtgtggtgctggacaagctcatcacc
atctacaagaagccgataagtgcaatacctgcaaggtcacttgaactatttcttgcaagc
agtcagaataataaacttctgtacagggaacccccgaaatcccctcgggccagtcggaaa
ttttcctccccaccacctctctctatctccaagtcatcgtcgcccattcgaaggaggaag
ctttccctgaacattcccattattactggggggaaagcactggatcttgccacgatgacc
tgctcagccaatggctatgcaagtatgtactcttcctcatcgtccttcagcaagaccgcc
ctagatatcaataaactgtatgtgtcgagtacttattcaaacaaactccctgatgagcca
gaaaccaaattggataagcatgaagatattggtcttggcaaaggaggtgctggcaaaaca
gttaaggaggattctgagagtgagcaggctcttagtgatgaggctgagactgagacttca
cccccaaaatctcctccaacgccaaaaaaactgaaagggaagaatccctcagaattctcc
ctgttttcctacaataatggagtggtggtcacatccagccgggaaatggacaataaccgc
agtgcactttcagcgacctcagcttttgccatcgccacagcgggagccaatgagggcact
cccaccaaggagaagttccggcggatgtccctggccagtgcaggctttcctgctgatcag
agaatttgtgacaaagagtttgtcattcgaagagcagcaactaatcgcgtactcaatgta
ctgaggcactgggtctcaaagcattcccaggattttgaagcaaatgctgaattgaagagt
caagtgattagttttctagaggaagtcattcatgatcctgagctgctaacacaggagagg
aaagcagcagcaaacatcatcaggactttgaaccaagaagactcagttgaccatcaaaca
attttggatgagataatgaatgtggtggaggaagagacatttgaaaacctctctgctttg
gagatagctgaggagttgactttgttggatcatctcatcttcgggtgtattccatatgag
gagttcttcggccagggttggatgaaacctgagaagaatgagagagccccatacattatg
aaaaccaccaaacacttcaacgatatcagcaacttaattgcttcggagattttgaagagt
gatgacgttaatgtgagaacagcagccatcgagaaatgggtggcagtggcagacatttgc
aagtgtctccacaactacaacgctgtgctggtgataacctccgccctgaaccgaagtgct
atcttccggctgaagaagacatggctgaaagtatcaaaacagaccaaggcattaattgac
aagttgcaaaaactggtgtcttcagaaggacggttcaaaaacctacgagaggctttgaaa
aattgtgaccctccatgtgttccttatttggggatgtacctaacagacttggctttcatc
gaggagggaacaccaaattatactgaagatggtttagtcaacttctccaagatgagaatg
atatctcacatcatccgagaaatccgtcagttccagcagactgcctacaagatagagcag
caaactaaggtggcacgctatttactggtccagtcaaatgtcatggatgaagaaactctt
tatgaagcatccctgaggatagaaccaaagcttctaacctga
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