Chiloscyllium plagiosum (whitespotted bambooshark): 122540892
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Entry
122540892 CDS
T08871
Name
(RefSeq) transducin-like enhancer protein 3 isoform X1
KO
K04497
groucho
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04310
Wnt signaling pathway
cpla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
122540892
04330 Notch signaling pathway
122540892
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpla04812
]
122540892
Cytoskeleton proteins [BR:
cpla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
ADF / Cofilin
SCMC complex
122540892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TLE_N
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
WD40_WDHD1_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
Beta-prop_RIG_2nd
HALZ
Beta-prop_IP5PC_F
WD40_RFWD3
Spc24
Motif
Other DBs
NCBI-GeneID:
122540892
NCBI-ProteinID:
XP_043533075
LinkDB
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Position
36:complement(2715883..2789708)
Genome browser
AA seq
779 aa
AA seq
DB search
MYPQGRHPAPHQPAQPFKFTVAESCDRIKEEFQFLQAQYHSLKMECDKLANEKTEMQRHY
VMYYEMSYGLNIEMHKQTEIAKRLNTILAQIMPFLSQEHQQQVAQAVERAKQVTMTELNS
IIGVRGVPNLPLTQHHAIYPPLTQQQLQAQHLSHTHPPAVQMPPHPSTLQPPGIPPVTGS
TSGLLALSSALGSQAHLSVKDEKNHHELDHRERESSVNNCISPSDSLRPERNSRSSSEYL
DAKKRKVEEKEAMNRYDSDGDKSDDLVVDVSNEDPATPRVSPAHSPRENGLDKARGIKKD
APNSPASIASSSSTPSSKTKDIGHNDKSSTPGLKSNTPTPRNDAPTPGTSSTPGLRAGKP
PSVDSLAPTLRAPISLTGSYAPFAMMSHHEMNGTLTSPGAYPGLHSISPQMSAAAAAYRS
PMVSFGGVSFDPHSHMRAPGLPASLASIPGGKPAYSFHVSADGQMQPVPFPPDALIGPGI
PRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKIWDISQPGSKSPVSQLDCLNRDN
YIRSCKLLPDGRTLIVGGEASTLTIWDLASPTPRIKAELTSSAPACYALAISPDAKVCFS
CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISHDGTKLWTGGLDNTVRSWDLREGRQL
QQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHHTKPDKYQLHLHESCVLSLKFAYCGK
WFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVIY
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgtatcctcaaggcaggcacccggctcctcatcaacctgctcaaccatttaaattcacc
gtggcggaatcgtgcgaccgcatcaaggaagaatttcagttcttgcaagctcagtatcac
agtttaaaaatggaatgtgataaactggcaaacgaaaaaacagagatgcagcgtcattat
gttatgtattacgagatgtcttatgggttgaatattgagatgcataagcagactgaaatt
gccaaaaggctaaacacgatcttggcacaaatcatgccatttctttcacaagagcatcag
cagcaagtggcacaagctgttgagcgtgccaagcaggtgactatgacggaactaaattcg
atcatcggggtacgtggagttcccaatctgcctctcacacagcaccatgctatctaccca
cctctcacgcagcagcagctccaggcccagcacctctcgcacacccacccacccgctgtc
caaatgccaccccatccatcaaccctgcagcctccaggcatccccccagttactggcagc
acctctggtctcctggcactttccagtgctctgggaagccaggctcacctgtcagtgaag
gacgagaagaatcaccatgagttggatcacagagagagagaatccagcgtgaataactgt
atctcaccatcagacagtctgaggcccgagaggaacagcaggagttcctcagagtatctg
gatgcaaagaaacgaaaggtggaagagaaggaggccatgaacagatatgacagtgacggt
gataaaagcgatgacttggttgtagatgtttccaatgaggacccagctacaccccgtgtt
agccccgctcactcgccgcgggagaatggcctggacaaggcccgagggataaagaaagat
gcacccaacagcccagcctctattgcatcatcaagcagcaccccctcgtcaaaaacaaaa
gatattggacataatgataaatcatcgactcccgggctgaagtcaaatacgccaacccca
cggaatgacgccccgactcccggtaccagttcaacaccaggactgagagcagggaaaccc
ccaagtgtggactcgctagcaccgactcttcgtgccccgatctctctgactggctcgtat
gccccatttgcgatgatgtctcaccatgagatgaacggcacactgaccagtccaggagct
taccctggtctccacagcatctcaccgcagatgagcgctgcagcggccgcctatcgatct
cctatggtgagctttggaggtgtcagctttgaccctcattcgcacatgcgagcgcctgga
ctccctgccagtcttgcctcaatacctggagggaaaccagcgtattcctttcacgtgagt
gcagatggacagatgcagcccgttccctttccccccgatgccttgattgggcctggtatc
ccacgacacgcccggcagatcaacacgctgaaccacggcgaagtggtgtgcgccgtcacc
atcagcaaccccacgcggcacgtgtacacaggaggcaaaggctgtgtgaaaatctgggac
atcagccaaccaggcagcaagagccctgtctcccagttagattgccttaacagagataat
tacatccgttcctgcaaactcctcccggatggccgtacgctgattgtgggaggggaagcg
agcacgctaacaatatgggatctcgcttcccccacgccaaggatcaaggctgagctcacc
tcttcggcgcctgcctgctacgcgctggccatcagccctgacgctaaagtctgcttctct
tgctgcagcgatgggaacattgctgtctgggacctacacaaccaaacactggtcaggcaa
tttcaagggcacacagatggtgccagttgtattgacatctcccatgatggcacaaagtta
tggacgggtggcctggacaacacagtgagatcgtgggacctgcgagaaggaagacagctc
caacagcatgactttacctcacagatcttctctctgggttattgccccactggggagtgg
ttagcagtggggatggagagcagtaatgtcgaagtgctacatcacaccaaacctgacaag
tatcagctgcatttgcacgagagctgtgtcctgtcactgaagtttgcatactgtggaaag
tggtttgtcagcactggtaaggataacctgctgaatgcttggaggacaccatatggtgcc
agtatattccaatcaaaggaatcatcgtctgtactaagttgtgacatctccgctgatgac
aagtacattgtcacagggtcaggtgacaagaaagcaacagtttacgaagtcatctactga
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