Chiloscyllium plagiosum (whitespotted bambooshark): 122540923
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Entry
122540923 CDS
T08871
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122540923 (chd2)
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122540923 (chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
HDA2-3
ResIII
Motif
Other DBs
NCBI-GeneID:
122540923
NCBI-ProteinID:
XP_043533163
LinkDB
All DBs
Position
36:7719020..7810747
Genome browser
AA seq
1908 aa
AA seq
DB search
MEQTLSEADNGIECLNNVDAASGLCNSTSQQLTLVDCLPSTNFDRENLHLGTPHPRAPKN
KTEPRTFLDPKMMSNEDKNPEDDGSDRSNASSNSASEESNHSASGSESGSQSESEQGSET
NNSSSESSESQSESESELAVSKLQQAATENKDKPLSKKERIADVKKMWEEYPDVYGVRRS
NRSRQEPARLNAGPESSENSENETPRRRGRRKAANWKSRVSENEEEEEEDDDEGEEEEEE
EEEEEEEAASSAESEPERKVRARRPVTRRPPARTQGKRQKTRRGKKRRRDSSDDDDDDDT
PKRQTRKCVTKNVSYKEDDDFETDSDDLIEVTGEPAREENDDSETIEKVIDSRIWKKGVV
GAPTTVYAVEADGNPGTDFDAEKDEKEVQYLIKWKGWSYIHNTWESEESLRQQKVKGMKK
LENFIKKEEEVNQWLTKASPEDIEYYNCQQEMAFDLNKQYQIVERVIAMKTSKSSSSHSE
FPSHSSHKPSSSGQPDYLCKWMGLPYVDCSWEDGALISRKFQACIDAFHSRHNSKTIPSK
DCKVLKQRPRFVTMKKQPSYIGSEGLELRDYQLEGLNWLVHSWCKCNSVILADEMGLGKT
IQTISFLSNLFNQHQLYGPFLLVVPLSTLTSWQREFEIWEPNMNVVVYIGDVMSRNTIRE
YDWLHPETKRLKFNVLITTYEILLKDKNVLGSINWAFLGVDEAHRLKNDDSLLYRTLIDF
RSNHRLLITGTPLQNSLKELWSLLHFIMPEKFDSWEDFEEEHGKGRENGFQSLHRVLEPF
LLRRVKKDVEKSLPAKVEQILRVEMSASQKQYYKWILTRNYKALTKGTRGSSSSFLNIMM
ELKKCCNHCYLVKQCEENENLSSQEVLQNLIKSSGKLILLDKLMTRLRERGNRVLIFSQM
VRMLDILAEYLTIKHYPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINL
ASADTVIIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLD
HLVIQRMDTTGRTVLDNSARPSHSTPFNKEELTAILKFGAEELFKEPEGEESEPQEMDIE
EILRLAETRENEQSVSPTDELLSQFKVANFSTMEENEPEVDDKQVKEWDDIIPEEQWKKI
EEEARQKELEEIYMLPRSRSSTKKAQANGSDSDAGSRRRRQRSSGSESETEESEDEDKRP
KRRGRPRTVRRDMVDGFTDAEIRRFIKSYKKFGAPLERLEGIARDAELVDKSIADLQRLG
ELIHNGCVMALKEFEEQLKENPGLEGKGPGKKRGPTIKVSGVQVNVKSILIHEDEFEALH
KAIPVDPEERKKYRLPCHAKAVHFDTDWGVEEDSNLLIGIYECGYSNWEQIKMDPDLQLT
NKILPDDPNRKPQAKHLQSRADYLIKLLKKDMIKKDALKQEEETKPKKRKPRVKKENKAP
RLKDESGNDITSPRLSDNPSEEDGELKDGGLDRAPVKKKLKKKDNKENKEKGDLKKEKDG
QKGKKKTKTKKDKMKSDARDKIRKSVSKGPVHITAGNDPVPIGEEGEDELDQETFSICKE
RMRPVKKALKQLDKPEDGLSEKEQLQHTRSCLLKIGDRISECLKAYTDSEQVKIWRRNLW
IFVSKFTEFDARKLHKLYKLAQKRRSQEEEEQKKKENNSESKRQFKLEPSGSSRDSMNSQ
LHVQHGPPVPHLLPPHHQQMHSHHREPYNQLNKRPFNNADRGDRPRDRMYNYNNNQQWGS
DRHHPYDQHRYKDHHFGDRRPRGDPHRNSGNYRPNNIHRKRPYNQYGNERDHRGHRDYYD
RRHQDLKRRRSDEFRPQDHHNLGHQPDFRRLPDHRQPGAYHSQGPSEHYRPFHLEKPMEH
KAPTGDHRSPLSQKSPHDSKSPLEHRSPLDRSLEHKNTPDYNWNVRKT
NT seq
5727 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaccttgtcggaggccgacaatggtattgagtgtttgaacaatgtcgatgct
gcgtcagggctttgcaactcgaccagccagcagctgactctggtggactgtctgccttcc
accaactttgacagggaaaatttgcacttaggaaccccacatccacgtgcacccaagaac
aaaaccgagccccgaaccttccttgatcccaaaatgatgtctaacgaggataaaaacccc
gaagacgacggatcagaccgcagcaatgcttccagcaactctgcttcagaagaatccaac
cactctgcctcaggatcagaatcaggcagccagtcggaaagtgagcagggaagcgaaacc
aataatagcagttcggaatcctcggaatcacagtctgaatcagaaagtgaattggctgtg
tccaagttgcaacaagctgccacagagaacaaggacaaaccactgagtaagaaagagagg
atagcggatgttaaaaagatgtgggaagaatatccagatgtttatggggttaggaggtca
aaccgcagcagacaggaaccggctcgacttaacgctggacctgagagcagtgaaaactct
gagaatgagactccaaggcgacgagggagaaggaaagctgccaactggaaaagcagagta
tctgagaatgaggaggaggaggaggaggatgatgatgagggggaggaggaggaggaggag
gaggaggaggaagaggaggaagcagctagcagcgctgaaagtgagcctgaaagaaaggtc
agagcccgtcgaccagttaccagaagaccaccagccaggacccaaggtaaaaggcagaag
actcggaggggaaagaaaaggagaagagattcttcggatgatgatgacgacgacgatact
cccaaacgccaaacccgcaaatgtgtgactaaaaatgtgagttataaagaagatgatgat
tttgagactgattcagatgatctcatcgaagttacaggcgaaccagcacgagaggaaaat
gatgacagtgaaaccattgagaaagtgattgactcccggatttggaaaaaaggagtcgtc
ggagccccaaccacagtctacgcagtagaggctgacggaaacccagggacagactttgat
gcagagaaggatgagaaggaggtgcaatacctcatcaagtggaaaggctggtcatacatc
cacaacacctgggagagtgaagagtcattgagacagcagaaagtgaaaggaatgaagaaa
ttagagaactttatcaaaaaggaggaagaagtaaaccaatggctgaccaaagcatctcca
gaagatatagagtactacaactgtcagcaagaaatggctttcgacctcaataagcaatac
cagatcgtagagagggtaattgctatgaagaccagtaagtcatcttcaagtcactctgaa
tttccatcacattccagccataaaccatcatcctctggccagccagactacctgtgtaag
tggatgggtttgccatatgttgactgcagctgggaggatggagctcttatttccagaaag
ttccaggcgtgcatcgatgccttccacagccgccataattccaaaaccattccctcgaaa
gactgcaaggtcttgaaacagaggcctaggtttgttaccatgaagaagcagccttcctat
atcggcagtgagggcttggaattgagggattaccaacttgagggtctgaactggctcgtt
cactcctggtgcaagtgtaacagtgtgatcctggctgatgaaatgggtttgggtaaaaca
atccagactatctcatttctctcaaacctattcaatcagcatcagctctatggtcctttc
ctcttggttgtcccactgtccacgcttacttcctggcagcgagaatttgaaatctgggag
cccaacatgaatgtggttgtttacatcggtgatgtcatgagccggaatacaatccgagaa
tacgactggttgcatcctgagacaaagagactgaagtttaacgtattgataacgacgtat
gaaattttgctgaaggataagaatgtcttggggagtataaactgggcatttctgggagtg
gacgaagctcatcggttgaagaatgatgactccctcttgtatcggactctaatcgacttc
agatccaatcatcgactgctgataactgggacaccgctgcagaactcattgaaagagctc
tggtcactcctgcacttcatcatgcctgaaaagtttgattcctgggaggactttgaagag
gaacacgggaaaggaagggaaaatggattccagagtctccacagggtcctggagcccttc
ttgctgcgcagagtaaagaaagatgttgaaaaatcgcttcctgccaaagttgaacagatt
ctgagggtggaaatgtcagcctcacagaagcagtattataagtggatattaacccgaaat
tacaaggcgctcaccaagggaaccagggggtcttcatcgagcttcctcaacatcatgatg
gagctgaagaaatgctgcaatcactgttatttggttaagcagtgtgaggagaatgagaac
ctgtccagccaagaagtgttgcagaacctgatcaagagcagtggcaagctgattctgttg
gataagctgatgacccggcttcgagagagaggaaacagagtgctcatcttctctcagatg
gtccgaatgttggatatcctcgctgaatacttgaccataaagcactatccattccagcgt
ttagatggatctataaaaggcgagttaaggaaacaggctttggatcactttaacgcagaa
ggatcagaggacttctgtttcctcctctctacgagagcagggggccttgggattaacctt
gcctctgcggacactgtgatcatctttgactctgactggaatcctcagaacgacttgcag
gcgcaggctcgagctcataggataggccagaagaagcaggttaatatttatcgcctggtt
acaaaagggactgtggaagaggacataattgaacgtgccaagaaaaaaatggtgctagat
caccttgtgatccagagaatggataccacagggcggacagtgttggataactctgctcgt
ccctcacactcaacaccattcaacaaggaagaactgactgcaatcttaaagtttggtgct
gaggaactgttcaaagaaccagagggagaggagtctgagccacaggaaatggacatcgaa
gagatcctacgtctcgctgaaacaagagagaatgagcagtctgtgagtccaacagatgaa
ctgctgtcccagttcaaggtggcaaactttagcacaatggaggagaatgagcctgaagtg
gatgacaagcaggttaaggaatgggatgacatcatcccggaggagcagtggaagaagatc
gaagaggaggcccggcagaaagagctggaagaaatttacatgcttccaaggagtagaagt
tcaactaaaaaggctcaggcgaatggcagcgattcggatgccggatcacggcgaaggcgg
cagaggtcatccgggtcagagagtgaaaccgaggaaagtgaagatgaggataagcggccc
aagcggagaggccgtccccggacagtccggagggacatggttgatggtttcacagatgct
gaaatcaggaggtttatcaaaagttataagaagtttggcgctcctcttgaaagactcgag
ggtattgctcgtgatgcagagctggtcgacaaatccattgcagatctccagcgactgggc
gagctcatacataatggctgtgttatggccctcaaggaatttgaagaacagctaaaagaa
aatcctggtctggagggaaagggccctgggaaaaagaggggaccaactatcaaggtttct
ggtgtccaggtcaatgttaaatcgattctcatccatgaagatgagtttgaggctttgcat
aaagccattcctgtggatcctgaggaaagaaaaaagtaccgtttaccctgtcatgcgaag
gcagtgcatttcgacaccgattggggtgtggaggaggattccaacttgctgatagggatc
tatgagtgcggttatagcaactgggagcagataaaaatggaccccgatctgcagcttacc
aataagattcttccagatgatcccaaccgcaaaccacaagccaagcatctccagtctcga
gctgattacctgatcaagcttctgaagaaagacatgatcaagaaggatgctttgaaacag
gaagaggagacgaaaccaaagaagcggaaacctagagtaaagaaagagaacaaggcacca
aggctgaaggatgaaagtggcaatgacatcacatctcctcggctttctgacaatccatcc
gaggaggatggagagctgaaggatggtggcttggaccgcgctcctgtaaagaaaaagctg
aagaaaaaagacaacaaggagaacaaggagaaaggtgatctcaagaaggagaaagacggg
cagaaagggaaaaagaagaccaagactaagaaggacaagatgaagtctgatgctagggac
aagattcggaagtctgtgtccaaaggtccggttcacattacagcagggaatgacccagta
ccgattggagaggagggtgaggatgagttagaccaggaaacgttcagcatttgcaaggag
cgaatgcggccggttaagaaagctctcaagcagctggataagccggaagatgggctatct
gaaaaggagcagctccaacacacccgcagctgcctgctgaagattggtgaccgaattagt
gagtgccttaaagcatacacagactctgagcaggtcaagatctggagaagaaatctctgg
atttttgtctccaagttcactgaatttgatgccagaaagctgcacaaactgtacaagtta
gcacagaagaggcggtcccaggaagaggaggaacagaagaagaaagagaataattctgag
agtaaacgtcagttcaaactggagccttcgggatcaagtcgtgattccatgaattctcag
ttgcacgtgcaacatggtcctcctgttcctcacctgctgccaccccatcatcagcaaatg
catagtcatcaccgggagccctacaaccaactcaacaagcgacctttcaacaatgcagat
cggggagaccgaccgagggatcggatgtacaactacaacaataaccagcagtggggatct
gatcggcatcatccatatgaccaacacagatacaaggaccatcattttggggaccgaagg
ccgcgcggagatccccacagaaactctggcaattatcggccaaacaacattcaccgcaag
agaccatacaaccagtatggcaatgagcgagaccaccgaggtcaccgggattactatgac
aggcggcaccaagatctgaaacgacgcagatcagatgaattccgacctcaggaccaccat
aacttagggcaccaaccagatttccggagattgcctgatcacagacagcctggggcctac
cacagccaaggaccttctgaacactatagaccctttcaccttgaaaaaccgatggagcac
aaggcacccacgggagaccaccgttcacccctctctcagaaatcgccacatgattcaaaa
tcccctcttgagcacaggtcccctctagaccgctcactggaacacaagaatactcctgac
tataactggaatgtgagaaaaacgtag
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integrated database retrieval system
