Chiloscyllium plagiosum (whitespotted bambooshark): 122540939
Help
Entry
122540939 CDS
T08871
Symbol
fanci
Name
(RefSeq) Fanconi anemia group I protein isoform X1
KO
K10895
fanconi anemia group I protein
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
122540939 (fanci)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpla03400
]
122540939 (fanci)
DNA repair and recombination proteins [BR:
cpla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
122540939 (fanci)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S3
FANCI_S1
FANCI_S2
FANCI_HD1
FANCI_S1-cap
Motif
Other DBs
NCBI-GeneID:
122540939
NCBI-ProteinID:
XP_043533198
LinkDB
All DBs
Position
36:complement(10045012..10126827)
Genome browser
AA seq
1343 aa
AA seq
DB search
MDQKILDLAAAEDCQGLLQLLQRMKEQEVGALITRYALKGKEIGMLMRAIFKGSPCVSNE
GVCLRLFVYKHCMQLVESGDLQSDVATDMIGLLMLEAHQLPGAALAELASLYVDAIKGGS
IINGKSLDLFPTILTVLASQESLNYGGGHLNGEEYKKQLINTLCSSRWDPKCVIHLTSMF
RDVPLSIEELQFVMMKVLRMLPKLDLQELPPLVYQLLLLSAKGCKKTLLEGITTFFHQQD
QLQKEEQTGTESMELEAVTVPQDQLCHVEGTVILHIVFAIKLDHDLGRELIKYLKAGQQG
DTSRVLCSFNIALMLSVARIHRFEEQVFDFLKTAIIKSFKDGQFQQNSKFLQDLIPAQCN
VSEMILETVSNSVFGWDHVTQSLVQLGFIFMDSFGPKAGPFGKVAETNPSAGKTPSQQTC
RLGAKILLETFKVHEPIRSEILEQVLNRVVTKSTSPINHYIDLLSDIVISAPLILLDSSS
KVIEAFDHLSYLPLSTVQGLLKAVQPLLKVSMSMKDSLILVLRKAMFSSHLDSRKSAVAG
FLLLLKNFKVLGSLASSQCTQALTASQVQVDVHMRYNASANEALCLEILGSLRRCLSQQV
DVRLMLYEGLFDVLRRNSQLAHTILQTLLSQLKRFYEVEEDLLPPLKLEGCITTQGSQIY
LQEPLAHLLSCIQNCLAWYKQSLSHRRHDNDIDDDDDEDSFQHDLEKQLDSITRRMIKSE
LEDFELDKSADFSLMSNVGIKNNIYAALVLGVYEVLMEHNFITSNYSLNQFENIISLFNR
YHKLSDLLKEKSGKGKSPSSNKTARSLLSFSFVSCLLTALFRDNAQSHEESLSVLRSSNE
FMRYAVSVALQKIQQLEETGQTDGPDGQNAEKIFKYLCEITRVLLWRYTSIPSAVEESGK
KEKGRTISLLCLEGLLRIFNMVQHRYQNKISQFFSAVDVVSDGEGEQEDINVTEKAAFHI
RQFQRSLMTQLSGDEEDFNSKEAQLLVSILSTLSRLLEPTSEQFGQMLTWTVKICKENNL
EDVHFCKGLMSMMFSLHVLHKSPVGLLQEMSRDVHCRLGDIDQDIEIEEQSHFAMVNSRT
AAPTVVQLILSQAEKVLEEVDWLITKLKGQLNSDKELTDDNSQMSMTREPAEKAIVLQLG
TLLTAFHELIQTSIPAGSCVDILLKELAKMYSILTSLVKYYIQGYTGHVAHLPARFEKLV
KLSGSHLTSQCYAFITYVQNIQSETVNFGGGPEKKKDKKKEMAAITAAKARVLRETRPIP
NLIFSIEQYEKFLIHLTKKSKVNLMQYMKLSTSRDFRINAATLDAALQEQEAEEIQDEAN
EQSSVGMDENQENREPKKKKRKR
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaagattttggatttggcagcagctgaggattgtcaaggattgctgcagtta
ctgcagcgcatgaaagaacaggaggttggtgccctgataacacgttatgctttgaaaggg
aaggagattggaatgctgatgagagctatttttaaaggttccccatgtgtttcaaatgaa
ggagtttgtctgaggctttttgtttacaaacattgcatgcaattagttgaatcaggagat
ctacaatcagatgtggcaacagacatgattggtttgctgatgcttgaggcacatcaactc
cctggagctgctttagctgaattggcaagcctgtatgtggatgctatcaagggaggaagc
attatcaatggcaaatcactggatctttttcctacaatacttactgttctggcctcccaa
gaaagcctgaattatggtggcggtcacttgaatggagaagaatacaagaagcaactaatc
aacacactgtgttccagcagatgggatccaaaatgtgtcattcacctcacatcaatgttt
agggatgtcccactcagtatagaggaacttcagtttgttatgatgaaagtgctgagaatg
ttgcccaagttggacttgcaggaactgcctccacttgtctatcagttgcttcttctctcc
gctaagggttgtaagaaaactcttttagaagggatcacaacattcttccatcaacaggat
cagttgcagaaagaagaacagacaggaactgagtccatggagttggaggctgtaacagtg
ccacaggaccagctttgtcatgtagaaggaacagtcattcttcatattgtgtttgctatc
aaactggaccatgatctaggccgtgaactcatcaagtatctaaaggctggccaacaagga
gataccagccgggttctctgctcttttaacattgcattgatgctgtctgtagctaggata
catcgatttgaggagcaggtgttcgactttctgaaaacggcgattataaaaagttttaaa
gatggacagtttcagcaaaattcaaaattcctccaggatttgatccctgctcaatgcaat
gtgtctgaaatgattttggagaccgtgtcaaacagtgtctttgggtgggaccatgttacc
caatctctggtacagttgggatttatattcatggattcttttggaccaaaggctggtcca
tttgggaaagttgctgagactaacccaagtgcaggaaaaactccatctcaacagacttgt
agattgggagccaagattcttcttgaaacattcaaagtacatgagccaattaggagtgag
atcctcgagcaagttctgaacagggtggtgacaaagagcacatcaccaatcaatcattac
atagacttgctatctgatattgtaatctcagctcccctcattctcctggactcttcctcc
aaggtgatagaggcatttgaccacttgtcctacttgccccttagcacagtccagggacta
ctaaaggcagtgcagccactgctgaaagtcagtatgtccatgaaagattcgttaattctg
gttctgaggaaagccatgttttccagccacttggactcccgaaagtcagcagtggctggc
tttctgttgctgctgaagaattttaaagtattgggaagtctggcttccagtcagtgcacg
caagctctcacggccagtcaggtacaagtggatgtgcatatgcgttacaatgcctctgct
aatgaagcgctttgtttggagatcttaggcagcctgaggcgctgtcttagccagcaagtt
gatgttaggctcatgctctatgagggcttgtttgatgttctgcgtcgaaattcacagctg
gcacataccatcttacaaacactgctttcacagctaaaacgattttatgaagtggaggag
gacctactaccacctctcaagctggaaggatgtattactactcagggaagccagatctat
ctccaggagcccctggcacatcttctgtcttgtatccagaattgcttggcctggtataaa
cagtccttatcacaccgtcgccatgacaatgatattgatgatgacgatgatgaagatagt
tttcaacatgacttggaaaaacaactggattcaatcactcgaagaatgattaagagtgaa
ctggaagactttgaactggataaatcagcagatttttcactaatgtccaatgttggcatt
aaaaataacatctatgctgccctggtattgggagtctatgaagttttgatggagcataat
ttcataacaagcaactacagcctgaatcaatttgaaaacatcataagccttttcaaccgt
taccacaagctttcagacctattgaaagagaaatctgggaaaggcaagtcaccctcatca
aataaaactgccaggagtcttctcagcttcagttttgtctcctgcttactgactgcactt
ttcagggataatgctcagagccatgaagagagtttgtctgtgctgcgttcaagtaatgaa
tttatgcgttatgcagtaagtgtggccttgcagaaaatacaacaacttgaggagacaggg
cagacagatggaccagatggccaaaatgctgagaaaatattcaagtatctatgtgagatc
actcgtgttctgctgtggagatacacttcgatcccatcagcagtggaggaatctggaaag
aaagagaaaggaaggactatttcgttactgtgtctggagggattactacgcatatttaac
atggtgcagcacagatatcagaacaagatctcacagttcttcagtgcagtagatgtggtg
agtgatggtgaaggagaacaggaggacatcaatgttacagagaaagcagccttccacatc
agacagttccagagatcccttatgacacaactgagtggggatgaagaagattttaacagc
aaggaagcacagcttttagtgagcatactgtcaacactctctcggctattagaacccaca
tctgaacaatttggccaaatgttaacatggactgtaaagatctgcaaggaaaataatcta
gaagatgtacatttctgtaaagggttgatgagtatgatgtttagtctgcacgtgctgcac
aaaagtccagtgggtttgctgcaagagatgtctcgagatgtccactgtcgcctaggggat
attgatcaggacattgaaatagaggagcaatctcattttgccatggtgaactcaaggact
gcagctccaactgtggtgcagctgattttgagccaagcagagaaagttctggaagaagta
gactggctgatcacaaaactgaagggccagctgaactctgacaaagaactgacagatgac
aactctcaaatgtcaatgacaagagagcctgcagagaaagctattgtccttcaactgggc
accctgttgactgcttttcatgagctgatccaaacatccattccagctggaagctgtgtg
gacattctcttgaaagagcttgctaaaatgtacagcattctcacctcgttggtgaaatac
tatatccaaggttacacaggtcatgtggcacatcttcctgcaagatttgagaaactggtt
aaactttcaggatcacacctgacctcacagtgctatgctttcataacctatgttcagaat
attcagagtgagacagtgaactttggaggaggaccagaaaagaaaaaagacaagaagaag
gagatggcagccatcactgcagcaaaggcccgagtgcttcgtgaaaccaggccaataccc
aacctgatattctccattgagcagtatgagaaatttctgattcacctaaccaagaaatca
aaggtgaatttgatgcagtacatgaagctcagtacatcaagggattttcgaattaatgcg
gccactttggacgcagcactccaggaacaggaagcagaggaaattcaggatgaagcaaat
gagcagtcaagtgttggtatggatgaaaaccaagaaaacagagaaccaaagaagaaaaaa
agaaaaagatga
DBGET
integrated database retrieval system
