Chiloscyllium plagiosum (whitespotted bambooshark): 122540940
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Entry
122540940 CDS
T08871
Symbol
polg
Name
(RefSeq) DNA polymerase subunit gamma-1 isoform X1
KO
K02332
DNA polymerase gamma 1 [EC:
2.7.7.7
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122540940 (polg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpla03032
]
122540940 (polg)
03029 Mitochondrial biogenesis [BR:
cpla03029
]
122540940 (polg)
Enzymes [BR:
cpla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
122540940 (polg)
DNA replication proteins [BR:
cpla03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase gamma complex (mitochondrial)
122540940 (polg)
Mitochondrial biogenesis [BR:
cpla03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA polymerase
122540940 (polg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol_Exo
DNA_pol_A
Motif
Other DBs
NCBI-GeneID:
122540940
NCBI-ProteinID:
XP_043533201
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All DBs
Position
36:9995516..10045189
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AA seq
1217 aa
AA seq
DB search
MNHLVLKRTSLAILLPKWRVSPSRWANTCAARNTPKECSSHEKTQTRMNPLNIQMLSSGL
HQQIFGDIQVEYSEEAVQKSIEHLKSHDLWNQETSILPDVELQLPKLYGSNIDEHFRTLA
QKQNLPYLEAANDLVQCDLPEMPTEWTWAVGWTKYDLDGQTKPVDFPDEKALVFDVEVCT
SESQCPTLAVAVSPTAWYSWCSKRLIEKRYTWSSQLTLTDLVPLETTANSTRPPKGDWPE
RLVIGHNVSYDRARVKEQYFMKGTGLRFLDTMSLHMAISGLTGFQRSLWMASKKGKRRGL
EEVKQHIKRTTNKSRNVGVGAWDWVNISSINNLPDVHALYVGGKPLEKEARELFIKGTMK
DIRENFQELMRYCANDVKATYEVFCEELPLFLERCPHPVTLSGMLEMGQCYLPVNHNWKR
YLDEAQGTYEELQREMKQSLMNLANDACQLLYGERYKDDPWLWDLEWGTQEFKQKKNTKK
KKKELVSTSEVANSGIMSEFEEDPGPPSEEKEEEMKAAKSRALLNDLHQTVSLLPKRRQH
LPGHPEWYRKLCLKWNDPHWLPGPSLISLQMRVTPKLMRLTWDGFPLHYSESHGWGYLVP
GRKDNLLTNPSDIDSPSCPYRTIEMVHQEHCKKKSQGQTDQSEMSVSNDYMLTENTMWEM
VEELSHMETEHEADYGNGGTKNSAQVNACSSLKDQNWEIQPSEFLEDSCCSYHHGNGPYN
EVNVPGCWFFRLPHKDGNQNNVGSPFAKDFLSKMEDGTLQAGTNATSATRALEINKMISF
WRNAQKRISSQIVLMLRKSELPRTVTRHPSYDEENDYGAILPQVITAGTVTRRAVEPTWL
TASNARTDRVGSELKAMVQVPPGYHLVGADVDSQELWIAAILGEAHFARIHGCTAFGWMT
LQGKKSNGTDLHSKTAVTVGISREHAKVFNYGRIYGAGQPFAERLLMQFNHRLTPQEAEE
KARQMYAVTKGIRRCVLSEDGKWLVKELGISVARAENGTVSTSDVRRIQREAAKRSNGAK
WRVVKQRVWSGGTESEMFNKLESIATFQSPRTPVLGCCISRALEPGAVGHEFMTSRVNWV
VQSSAVDYLHLMLVSMRWLFEEFNIDGRFCISIHDEVRYLVNSEDRYRAALALQITNLLT
RCMFAYKLEMQDLPQSVAFFSAVDVDQCLRKEVTMDCQTPSNISGLQRRYGIPEGEALDI
YQIIEKTNGSLDKRKQT
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatcttgtattgaagaggacatctctggcaattttactcccaaaatggagggtt
tcaccatcaagatgggccaacacctgtgctgcacgcaacaccccaaaagaatgttccagt
cacgagaaaacacagacccgtatgaatccattaaatattcagatgctgtccagtggtctc
catcagcagatctttggagatatccaggttgagtactctgaggaggcggtccagaagagc
attgaacacctcaagtctcatgacctctggaaccaggaaacctccatcctgcccgatgtg
gaactgcagctgcctaagctgtatggcagcaacattgacgaacattttcgtacccttgct
cagaagcaaaacctcccctacttggaagcagccaatgatcttgtgcagtgtgacctccct
gaaatgcccacagagtggacctgggcagttggttggacaaagtatgatctggatggacaa
acaaagcctgtggactttcctgatgagaaggcactggtgtttgatgtggaggtatgcact
tcagagagccagtgtccaacattggctgtagccgtatctccaactgcttggtactcctgg
tgcagtaagcgcctcattgagaagcgttacacatggtccagtcaactgaccctgaccgac
ctagttcccctggagacaactgcaaactccacgcgtccaccaaaaggtgactggccagag
agattggtcattggccacaatgtcagctatgacagagcaagggtcaaggaacagtacttt
atgaagggaacagggcttcgctttctggacacgatgagcttgcacatggctatttctggt
ctgaccggcttccagcgcagcctttggatggcgagtaaaaaggggaagaggaggggtctg
gaagaagtaaagcagcacatcaaacggacaaccaacaaatcgagaaatgtaggggttgga
gcctgggactgggtgaacatcagcagcattaataacctccctgatgtccatgcactctat
gtgggaggcaaacctcttgagaaggaggctcgtgagcttttcatcaaaggcacaatgaaa
gatattcgggagaacttccaggagctgatgcgatactgtgccaatgacgttaaagctact
tacgaggtgttttgtgaggagcttccactgtttctagaaaggtgcccacacccagtgacc
ctttctggcatgctagaaatgggacagtgctaccttcctgtcaaccacaactggaagaga
tacctggatgaggcacagggtacgtatgaagagctgcagcgggagatgaagcagtccctc
atgaacctggccaatgatgcctgtcagctcctgtacggtgaaagatacaaagatgacccc
tggttgtgggacctagaatggggtacccaagaatttaaacagaagaagaacactaagaaa
aagaaaaaagagctggtcagcaccagtgaagttgcaaattctggcataatgtcagagttt
gaggaagatccggggcctccctcagaagaaaaagaggaggagatgaaggctgccaaaagt
agagcccttctgaatgatctgcatcagacagtcagtcttctcccaaagagaagacagcat
ttaccaggccatccagaatggtatcggaaactgtgcctgaagtggaatgatccacattgg
ctgccagggcccagtctcatcagtctccagatgagggtcactccaaagctgatgcgtttg
acttgggatggatttccactgcactattcagagagccatgggtggggctatctggtccca
ggaagaaaggataatctactaactaaccccagtgacatagattcaccttcttgcccatat
agaaccattgagatggtgcaccaggaacattgcaaaaagaaatcacaaggacaaaccgat
caatcagagatgtcagtcagcaatgattacatgctgacagagaatactatgtgggaaatg
gtggaggagctgagtcacatggagactgaacatgaagctgattatggtaatggcggtacg
aagaattctgcacaggtgaatgcctgctcctctttaaaagatcaaaactgggagatacag
ccatcagaatttcttgaggacagctgttgttcgtatcaccatggaaacggtccgtataat
gaggtcaatgtgcctggatgctggtttttcagacttccacacaaggatgggaatcagaac
aatgttgggagcccctttgcgaaggatttcctctctaagatggaagatggtacattgcag
gctggcaccaatgcaacaagtgcaaccagagcactggaaatcaataagatgatttcattc
tggaggaacgctcaaaaaagaatcagttctcagattgttctgatgctgaggaaaagtgag
ctacctcgaacagtcacaaggcatccttcctatgatgaagaaaatgattatggagctatt
ttgccacaagtcattacggctggcacagtgaccagacgggcggttgaaccgacctggcta
actgccagcaatgcacggaccgatcgcgtgggtagtgaactaaaggcaatggttcaggta
ccaccagggtatcacctggtcggagcagatgttgactcacaagagctgtggattgctgcc
attcttggagaagcccattttgcgagaatacatggctgcactgcgtttggctggatgaca
cttcaggggaaaaagagcaatggtacagatctacacagcaagacagctgtcactgtggga
atcagtcgggaacatgccaaagttttcaattacggacggatatatggtgctgggcagcca
ttcgcagagaggctcctcatgcagtttaatcaccgtctcacgcctcaggaagctgaagag
aaagcacggcagatgtacgcagtgactaagggcatccggaggtgtgtgctttcagaagat
gggaagtggcttgtgaaggagcttgggatctctgtggcaagagcagaaaacggaactgtg
tctacctcagatgtacggagaatccaaagagaggcagcaaaaaggtctaatggtgccaag
tggagagttgtgaagcagagggtctggagtgggggcacagagtcagaaatgttcaacaaa
ctggaaagtattgccacattccaatccccccgaaccccggtgttgggctgctgtattagc
agagctctggaaccaggtgctgtaggacatgagttcatgaccagtcgtgtgaactgggtg
gtgcagagttcggctgtggattacctccacctcatgttggtgtccatgagatggctgttt
gaggagttcaatattgatggtagattttgtatcagcattcatgatgaggtccgatactta
gtgaatagtgaagaccgatatcgagctgcactggcactgcagattactaatctgctaacg
cgctgcatgtttgcctacaaactagagatgcaggatctccctcagtctgtagcattcttt
agtgcagtggatgttgaccaatgcctgagaaaggaggtgacgatggattgtcaaacccca
tcgaatatttctgggctgcaaagacgatatggtatcccagaaggagaagcactggatatt
tatcaaattattgaaaaaacaaatggatctcttgacaaaaggaaacaaacataa
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integrated database retrieval system
