Chiloscyllium plagiosum (whitespotted bambooshark): 122541027
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Entry
122541027 CDS
T08871
Symbol
nedd4a
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4a isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04120
Ubiquitin mediated proteolysis
cpla04144
Endocytosis
cpla04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122541027 (nedd4a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122541027 (nedd4a)
09144 Cellular community - eukaryotes
04530 Tight junction
122541027 (nedd4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122541027 (nedd4a)
04121 Ubiquitin system [BR:
cpla04121
]
122541027 (nedd4a)
03029 Mitochondrial biogenesis [BR:
cpla03029
]
122541027 (nedd4a)
Enzymes [BR:
cpla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122541027 (nedd4a)
Membrane trafficking [BR:
cpla04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
122541027 (nedd4a)
Ubiquitin system [BR:
cpla04121
]
Ubiquitin ligases (E3)
HECT type E3
122541027 (nedd4a)
Mitochondrial biogenesis [BR:
cpla03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
122541027 (nedd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
122541027
NCBI-ProteinID:
XP_043533419
LinkDB
All DBs
Position
36:19896736..20046710
Genome browser
AA seq
1220 aa
AA seq
DB search
MARRLRLHFATRRSNTDPLSETSGEGLESNICMTVETVPVNVRKNVHQVTTHEPMVVQTA
SQGERILQRSSSLFIPQVSNNDHHRKKSSTLQISLQSKQSRGQCEPSTRTSNNGSEGGSC
NADISFDQELLECVVGSTKASVKLRKSKVPLRRCSSLVIFPQSPCSTPPATPTSPDPFTS
ASNNPTLNRFLPCPHEPNQDEDQAVSKFKEASACFVATAVNGLRLSNPICASTEIRDIKS
LHCNGQQPGKNRAIDYGEDEAESWGKVKKLQRPSNHILHLNYQRAHVFGTETKEGQIQPE
SFMKEFKQSSLNAGHTHHPNKLIRSTSVCLPSFNGVIEREIINDQNKRPIFQRSHSLEVP
CQLVSSYHSKPKQSKVGIPHLQIHVAPRSEQKSFNSVEEVTGTVWGHKCKTRDDFLGLVD
IPLQHIPTENPNQERPYTFKDFILHPRSHKSRVKGHLRLKMTYLPKSNASEEDSTEQTDE
LEPGWELLDQQSVTVHSQPPPALPSGWEEKQDNLGRTYFVNHETRTTQWIRPSSQDTASD
INRCRNNIQLEAQRVYSTRRQISEETETSESNRDSPDQSWEIITDDETVFGNCNPQSPPP
PHTPTGQNAGFDLQNQLAEELSRRFQASGCTVTDRRSSCSSHSSRRGSSQTTMEEQPVLP
VILPTSTGLPPGWELKKDDKGRAYYVNHNNRTTSWTRPVMQTTSEAVQPKPCRSPTAYLP
PTASPQDSPQNSPGQQRKYDLGFLPPGWEVRHASNGRHFFIDHNTKTTTWEDPRLKIPVH
MRHRPSLDPSDLGPLPPGWEERIHSDGRIFYIDHNSKVTQWEDPRLQNVAITGPAVPYSR
DYKQKYDYFRKKLRKPSDGPNRFEMKLRRNAILEDSYRKIMSVKRVEFLKARLWIEFDSE
KGLDYGGVAREWFFLLSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEEHLSYFKFIGR
VAGMAVYHGKLLDGFFIRPLYKMMLQKPITLQDMESVDSEYYNSLMWILENDPTDLDLRF
VVDEELFGQTQQHELKPDGSEILVTNKNKKEYIHLVMQWRFVNRIQEQMNSFKEGFFELI
PQDLIKIFDENELELLMCGLGDVDVNDWRENTKYKNGYNANHPVIQWFWKTVLLMDSEKR
IRFLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGTPEKLPRAHTCFNRLDLPPYESFE
ELREKLNLAIENTEGFDGVD
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtcgtttgcgattgcattttgcaaccaggaggagcaacactgacccactgtct
gaaacttcgggagagggcttggagagtaacatttgtatgacagttgagactgtaccagta
aatgtgagaaagaatgttcaccaagtgactacacatgaacccatggtggtgcagacagca
tcacagggtgaacgtatcctacagcgcagttcttcattgtttataccacaggttagtaac
aatgatcatcaccgcaaaaaaagctccacgttgcaaatatcactgcagtccaaacaatcc
agaggacagtgtgaacctagtactcgtaccagcaacaatggcagtgagggtggttcatgc
aatgctgatatttcttttgaccaagagcttttagaatgtgtggtggggtccaccaaagca
tcggtaaagttgaggaaatcgaaggtgccgttgagacgttgttcatcactggtgatattt
cctcagagtccatgtagcactccgccagctacaccaacaagcccagatccttttacaagt
gcaagtaacaatcccacattaaatagattccttccttgcccccatgaaccaaatcaagat
gaagatcaggctgtgtctaaattcaaagaagcaagcgcatgttttgttgcaacagcagtt
aatggactgcgtttgtctaacccaatttgtgcttctactgaaattagagacattaagtca
cttcattgcaatggacagcaacctggcaaaaatcgagcaatagattatggtgaggacgaa
gcagagtcttgggggaaggtgaagaaactgcaaagaccttcaaatcacattctgcactta
aattaccaaagagctcatgtatttggaacagagaccaaggaaggacaaattcagcctgag
tcgttcatgaaggagtttaagcagagttctttaaatgctggacatacacatcatcctaac
aagttaataaggagcacctctgtatgtttaccttcattcaatggtgtgatagaaagggaa
attataaatgatcaaaataaacgtccgatctttcaaaggagccattcgcttgaagttccc
tgtcagttggtttccagttatcactcgaaacctaagcaatcaaaggttgggatccctcat
ttacaaatccatgtagctcccagatcagagcaaaagagctttaattctgtggaggaagtg
actggaactgtttggggacataagtgcaagaccagggatgattttctgggcttggtggat
attccccttcaacatatcccgactgaaaatccaaaccaggagagaccatatacattcaag
gatttcatccttcatccgagaagtcataagtctagggttaaaggacaccttcgattaaag
atgacctatttgccaaaaagtaatgcttctgaagaagatagcacagagcaaactgatgaa
ttggagcctggctgggaacttctggaccaacagagtgtgactgtccatagccaacctccc
ccagcattacccagtgggtgggaagagaagcaggataatctgggaagaacttactttgtc
aaccacgaaaccagaacaacgcagtggattcgaccaagttctcaggacactgcatcagac
ataaatcgttgtcgaaataacatccagctggaggcacagcgtgtatatagtacacggaga
cagatatcagaagaaacagaaacttctgaaagcaacagagattctccagatcagagctgg
gaaattataactgacgatgaaactgtgtttgggaactgcaaccctcagtcacccccacct
ccccacacacctacgggacagaatgcaggttttgacttgcaaaatcagctcgcagaggaa
cttagtcggcgttttcaggcatctgggtgcacagttacagatcgtcgcagctcctgctca
agtcattccagtagacggggaagttcacaaactactatggaagaacagccagtgctgccg
gttattttacccacttcaacaggattgcctcctggctgggaactaaagaaggatgacaag
ggaagagcttattatgtcaaccacaataaccgaaccaccagttggacgcgacctgttatg
cagaccactagtgaggcagtacaaccaaaaccctgtcggagtcccacagcgtatcttcct
ccgacagcatctcctcaagattctccacaaaattccccaggccaacaaaggaaatatgat
ttgggctttctccccccaggctgggaagtccgacatgcaagcaatggtagacatttcttc
attgatcacaacaccaaaacgacaacatgggaggacccaagattaaaaattccagttcat
atgaggcatcggccatctttagatccttcagaccttgggccacttcctcctggctgggag
gagagaattcactcagacggtagaattttctacatcgaccataattctaaagttacccag
tgggaggatcctcgtttacagaatgtagccatcactggacctgctgtgccttactcaaga
gattacaaacagaagtatgattatttcaggaaaaagctgaggaagccttcagatggtcca
aatcgatttgaaatgaagctacgtcgtaatgcaatcttagaagattcctacagaaaaata
atgtctgtgaagagagtggaattccttaaagccagactgtggattgagtttgattctgaa
aaaggattggattatggtggtgttgccagggaatggttttttctcctctctaaggagatg
ttcaatccttattatggattgtttgaatattctgccacggacaattacaccttacagata
aatccaaactctggactttgcaatgaggagcatttatcttacttcaagttcataggccgt
gtagctggaatggccgtttaccatggaaaattattagatgggtttttcatcagaccattg
tataagatgatgcttcagaagccaattacactgcaagatatggagtcagtggacagcgag
tattacaactcactaatgtggattcttgaaaatgatccaactgatttggatcttcgattt
gtggttgatgaagagttgtttggtcagactcaacaacatgaactaaaacctgatggatca
gaaatattggttaccaacaaaaacaagaaagaatacattcaccttgtgatgcagtggagg
tttgtcaatcgcatccaggagcaaatgaattcttttaaggagggcttttttgaactgatc
ccacaagatctcataaaaatatttgatgagaatgaattggagctattaatgtgtggacta
ggggatgtagatgtcaacgactggagggagaatacaaagtacaaaaatggatacaatgca
aaccatccggtcatacaatggttttggaagacagtgctgttaatggattcagaaaagcgt
attcgattcctgcagtttgtgactggtacttcacgggtacctatgaatggatttgctgaa
ttgtatggatcaaatggaccacagttatttactattgaacagtggggaactccagagaaa
ttaccaagagctcacacatgtttcaatcgtctcgatttgccaccttatgaatcatttgaa
gaattgcgggagaagcttaacctagcaattgagaacactgaaggttttgatggagtcgat
tga
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integrated database retrieval system
