Chiloscyllium plagiosum (whitespotted bambooshark): 122541079
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Entry
122541079 CDS
T08871
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1 isoform X1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122541079 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpla03009
]
122541079 (efl1)
Ribosome biogenesis [BR:
cpla03009
]
Eukaryotic type
Pre-60S particles
GTPases
122541079 (efl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
EFG_IV
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
122541079
NCBI-ProteinID:
XP_043533539
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All DBs
Position
36:29817016..30079875
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AA seq
1165 aa
AA seq
DB search
MLPDLLCFSSATLFSSDLKIKFTMGHTNLENIVDLQKNTANIRNICIVAHVDHGKTTLAD
SLIASNGIISNRLAGKLRYMDSREDEQLRGITMKSSSISLHFTIDNQEYLINMIDSPGHV
DFSSEVSTAVRVCDGAVVVVDVVEGVCPQTQAVLRQAWLENIRPVLVINKIDRLIIELKL
TPFEAYIHLQKILEQVNAVTGSLFTSKVLEERAEMGVTEKTSSDTKSSEHFYDWSAGLEE
TDDSHLYFAPDQGNVVFGSAIDGWGFRIEQFAQMYSQKVGISAQVLLKTLWGDYYLNTKA
KKIMKGAQSKGKKPLFVQFVLENIWSLYECVVVRRDKEKIDKIVNSLGLTILPRDSRHTD
SKVHLNAICTQWLPISHAVLSMVCNKLPSPLDIAAERVEKLMCVRSRRFDSLPPQIQALR
RAFLECKSDETAPVIVFICKMFAVDSKALPQNKLRPLSQEEIAQRREQARKRHAEKLVNQ
MQKLEQNPPEKTVEISPMNASTKDLHVESQMEQADLTTCLQESQQKEHFIAFARVYSGTI
RRGQKLFVLGPKYDPSEALTKLPERCSPNDDLSIPHLACCTVEDLFLLMGKELENVEEVP
VGNVLGIGGLEDYVLKSATLSTSPVCPPFTPLNFEATPIVRVAVEPKHPSEMPQLVRGMK
LLNQADPCVEVLVQETGEHVLVTAGEVHLQRCLDDLRERFAKVEISSSAPIVPFRETLIR
PPKVDMVNEDIGTQQKIAVIHQKKEDQNKYPEGVIVDSDGLVTLNTPNKLSILSVRAMPL
PEAVTQLLEESSDLIRTIEQFNLSVKEGRDTQEINPTTLEAIQKFKQKLEENFVGRKWRN
AVDQISSFGPRRCGPNILLNRLESYHRPSMWQCLDKTRKDLGTYKDFDNSIISGFQLATL
SGPVCEEPLMGVCFILEKWDMSKVQQLVQTHNQSLTEGQTTNVEELQEQVISNENSLSEL
EPRMEKQPRPGDQILESQTPAESVADTLCNSEAKLTDCYGPFSGQLIATMKEACRFAFQA
RPQRLMAAMYTCEIMATAEVLGRVYAVLSKRTGRVLQEEMKEGTEMFIIKAILPVAESFG
FADEIRKRTSGLASPQLVFSHWEVIQSDPYWVPTTEEEYLHFGEKADTVNQANKYMNTVR
KRKGLYVEEKIVEHAEKQRTLSKNK
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgctgcctgacctgctgtgcttttccagtgccacacttttctcctctgatctcaaaatc
aaattcacaatgggtcatactaatttggaaaatattgttgatctacaaaagaatactgcc
aacatccggaatatctgtattgtagctcatgtggaccatggaaaaaccacattagctgat
agccttattgctagcaatgggatcatttctaatcgacttgcaggaaagttgcggtacatg
gacagccgagaagatgagcagctccgtggaatcactatgaaatccagttctatttcattg
catttcactattgataatcaagaataccttattaacatgatagattctcctggtcatgtg
gatttttcctctgaagtatcgactgctgtgcgtgtatgtgatggtgctgttgtggtagtt
gatgttgttgaaggtgtttgtcctcagacgcaagcagtgttacgccaggcttggttggaa
aatattcgtccagttttagtaattaacaaaatagatcgactaataattgagctaaaattg
actccatttgaagcttatattcacttacaaaagattctagaacaggtaaatgcagtgact
gggagtctgtttacttcaaaagtattggaagagagagcagagatgggagtaacagaaaaa
actagttcagacaccaagagcagtgaacatttctatgactggagtgcaggcctggaagaa
acagatgattcgcatctttactttgcccccgatcagggaaatgtggtatttggaagtgct
attgatggctggggtttcaggattgaacagtttgcccagatgtacagccagaaggtgggt
attagtgcacaagtgttgctgaaaactctctggggtgactactatctgaacacaaaggca
aagaagataatgaaaggagcacagtcgaaaggtaaaaaaccgctctttgtacagttcgtg
ttggaaaacatctggagtctgtatgagtgtgtcgttgtcagaagggataaagagaagatt
gataagattgtaaattcattgggtcttaccatcctacctcgtgattcacgccacacggat
tctaaagtgcacctcaatgccatttgtactcaatggcttcccatttcccatgctgtgttg
tcaatggtatgtaacaagctccccagccctttggatattgctgcagaacgggttgaaaaa
ctcatgtgtgttcgaagccgtagattcgattcactgcctccgcaaatccaagccctcaga
cgagcattccttgaatgcaagagtgatgagacagccccagtgattgtgtttatttgcaag
atgtttgcagttgattccaaggctttgccccaaaataagttaagacccttgagtcaagaa
gagatagctcagcggcgggagcaggccagaaaaaggcatgcagaaaaacttgtaaatcag
atgcagaagttggaacaaaacccacctgagaagactgttgagatctccccaatgaacgca
agcacaaaagacttgcacgtagagagtcagatggagcaggcagatctgactacttgctta
caggagagtcaacagaaagagcacttcattgcgttcgctagagtatatagtggaacaatt
cgtagagggcagaaattgtttgtgctaggaccaaagtatgacccttcagaagctttaacc
aagttgccagagagatgctcaccgaatgatgacctgtcaatcccacacttggcttgttgt
acagtggaggacttgttcctgctcatgggaaaggaattggagaatgtagaagaggtacca
gttggcaatgtgctcggtatcggaggcctagaagattacgtcttaaaatctgctacgttg
tcaacctcccctgtatgtccaccatttacacctctgaactttgaggcaactcctattgta
cgggttgctgtggaaccaaagcatccaagtgaaatgccacagctggtgagagggatgaag
ctgcttaaccaggctgatccgtgtgtggaagtgctagtccaagagactggagagcacgtg
ttagtaactgctggagaggtccacctgcagcgatgcttggatgacctcagagaaaggttt
gcgaaggttgaaatcagttcatcagcaccaatcgttccatttagggagactctcattcgc
ccaccaaaggtggacatggtaaatgaagacataggaacacaacaaaagattgctgtcatt
caccaaaagaaggaggaccagaataaatatcctgaaggtgtcattgtggattccgatggc
cttgtgaccttgaacacacctaacaagttgtccattctcagtgtgagagccatgccactt
cctgaagcagtgacacagttgctggaagaaagcagtgatctgattcgtacaatagagcag
ttcaatctatcagtaaaagaaggcagagatacacaggagatcaatccgacaacacttgag
gccatccaaaagttcaaacaaaagctggaagagaattttgttggtcgaaaatggagaaat
gcagttgaccaaatttcttcatttggaccacgccgttgtggccctaatattttactaaat
agattggaaagttatcataggccatccatgtggcagtgtcttgataaaaccaggaaggac
ttggggacatacaaggattttgacaatagtataatcagtggatttcagttggcgactctg
tcaggtcctgtgtgtgaagagcctttgatgggtgtttgcttcattttagaaaagtgggac
atgagtaaagtgcaacagctagttcaaacacataaccaatctttgacagagggacaaaca
acaaatgttgaggagttgcaggagcaggtaatttcaaatgaaaatagcctttctgaattg
gagcctagaatggaaaagcaaccaagaccaggcgatcagattctggagagtcagactcca
gcagaaagtgtggctgataccctgtgtaactcggaagccaagcttacagattgctatggt
cctttctcaggccagctcatcgccacaatgaaagaagcttgtcgttttgcattccaggca
cgacctcaacggctcatggcagcaatgtacacgtgtgagattatggcaactgcagaagta
ttaggtcgggtctatgcggtcctttcgaagcgtacaggccgggtgttgcaagaggagatg
aaagaagggacagaaatgttcatcattaaggccattttgccagttgcagagagctttggc
ttcgctgatgaaatccggaagcggacaagtggcctagccagcccacagctggtgttcagt
cactgggaggtaattcagagcgacccctactgggttccgacaacagaagaagagtacttg
cattttggagagaaggctgatacagtaaaccaggcaaacaaatacatgaataccgtgcgc
aaacggaaagggctgtatgtagaggaaaagattgttgagcatgctgagaagcagagaacc
ctcagcaaaaataaataa
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