Chiloscyllium plagiosum (whitespotted bambooshark): 122541242
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Entry
122541242 CDS
T08871
Symbol
rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpla04121
]
122541242 (rnf20)
Enzymes [BR:
cpla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122541242 (rnf20)
Ubiquitin system [BR:
cpla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
122541242 (rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
zf-C3HC4
zf-C3HC4_3
CC_Bre1
zf-C3HC4_2
zf-RING_2
zf-RING_5
BRE1
zf-RING_UBOX
CCDC113_CCDC96_CC
SpoIIE
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
122541242
NCBI-ProteinID:
XP_043533793
LinkDB
All DBs
Position
37:complement(17006221..17049184)
Genome browser
AA seq
970 aa
AA seq
DB search
MKERETPGVGSKRAAADPPPGPPEKSANLEESAGSSGAKVETIKLGSDSSTEELDIRTLQ
SKNRKLAEVIDQRQTIEDELREQIEKLVKRQATDDATLLILNRYWCQFDENVRIILQRWD
LEQEQESRDVLSEKKMLVVSDPEPDSDSNQERDRREEREKACREGQSESALPFLAMLASS
TSEEMELQLQDRVAYSRQAVSSTADVFEKLRLRIDQLAEWVTSKGSPLLEDALRELNSLL
SKENERLLELTDCLREKHHKMSQEFSELQGKLEEAESRLLDMQTTIEDLQWDTDKIRKRE
QRLNRHLAEVLERVKSKGYKVYGGSSNLYGGTVTINARKFEEMNCDLEENKELALNRLSE
LEKMRQDLQMVTGDNEKLRDQLKSLANEMVKDSPEFRCLQSQFSVLYNESLQLKAQMDDA
RSLLFTTRTTHQRQVEQMEVSCGTCPIPEPRPSPLTLCDAYPRSGISTPPLFPLLRPCPG
PINREMRHLISSLQNHNHQLKGDVQRYKRRLRDSHAELAKVRRKVWETHSELGLVRSRGS
SGSQPQAGGTEQVKEEAPDIKQEPEDGSSKREKEEAEAAKQRRQQQQEEEKEKEKEKERE
REKREKERERAREKGREKDTEKDRDKDKADKERDRSKPEDTKKKEAEMVKQLRGELKRAQ
ESQKEMKLLLDMYRSSPKEQRDKVQLMASEKRAKAELESLRQRLKELEEKERHEGKKMAD
VEALRRMKLVDEQMEHMLKKVAMAKQEEEALLSEMDVTGQAFEDMQEQNIRLMQQLREKD
DANFKLMSERIKSNQIHKLLKEEKEELGDQMLTLKTQVDAQLQVVKKLEEKEQLLQTNLT
AMEKELSLRTQTLDMHKRKVRGQGAGGLPSSPIPAGGLVRGSNSCHRSSFIFEHILMSLS
PSPSLPLCLGDQAKLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFG
ANDFHRIYIG
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagagggagacgccgggcgtgggctccaagcgggcggcagcagacccaccacct
gggcctcccgagaaatcggccaacctagaggagtcggcggggagctcgggggccaaggtg
gagaccatcaaactggggagcgacagttccacggaggagcttgacatccggacgctgcag
agcaaaaaccggaagctcgctgaggtgatcgatcagcgacagaccatcgaggatgagctg
agggaacagatcgagaagctggtgaaacggcaagccacagatgacgccaccctcctcatt
ctgaaccgctactggtgccagtttgatgagaacgtgcggattatcctgcagcgttgggat
ctggagcaagagcaggaaagccgggatgtactgtctgagaagaagatgttggtggtatct
gaccctgagcctgattccgatagcaaccaggaacgggaccgtcgtgaggagagagagaaa
gcgtgcagggagggccagagtgagagcgcgttgccgttcctggccatgttggccagcagc
accagcgaggagatggagctacagctccaggatcgggttgcctattcccgccaggccgtg
tccagcaccgctgatgtcttcgagaagctccgtctccggattgaccagctggccgagtgg
gtcaccagcaaaggttcgcccctgctggaggatgccctgagggagttgaattcgctcctg
tcgaaggagaatgagaggttgctggagctgacagactgcctgcgagagaagcatcacaag
atgtcacaagagttctcagagctccaggggaagttggaggaggcagagagtcgcctgttg
gacatgcagaccaccatcgaggacctgcagtgggacactgacaagattcgcaaacgggag
caaagacttaacaggcacttggcagaggtgctggagagggtcaaatcgaaaggttacaaa
gtttacggaggatcgagtaatctgtacggggggactgtcaccatcaacgccaggaagttt
gaagagatgaactgtgacctggaagagaataaggagttggccttgaaccgactctcggag
ctggagaagatgcggcaggatctccagatggttacaggggacaacgagaagctgagggac
cagttgaagtctcttgccaatgagatggtgaaggattccccggagttccggtgcctgcag
tctcagttctccgtactgtataacgagagcctgcagctcaaggcccagatggacgatgcc
cgcagcctgctcttcaccacccgcaccacccaccaacgccaagtggagcagatggaggtg
agctgtggtacctgccccatcccagaaccgcgcccctcgcccctcaccttgtgcgacgcc
tatcctcggtccgggatctctactcctcctctcttcccactcctccgtccttgtccaggg
cccatcaaccgggagatgcgtcacctgatcagcagcctgcagaaccacaaccaccagctg
aagggcgatgtgcagcgttacaaacggaggctgcgagacagccacgcagagctggccaag
gtgcggcggaaagtctgggagacccacagcgagctgggcctggtccggtcgcggggatcc
agcgggtcgcaaccgcaggccggaggcactgagcaggtcaaagaggaggccccagacatc
aagcaggagcccgaggacggtagcagcaagagggagaaagaggaggccgaggctgccaag
caacgcagacagcagcagcaggaagaggagaaggagaaggagaaagaaaaagagagagag
cgggagaagcgcgagaaggagagagaacgggccagggagaaggggagggagaaagacacc
gagaaagatcgggacaaggacaaggcagacaaagagagagacagaagcaaacccgaggac
accaagaaaaaggaggcggagatggtcaaacagctacgaggcgaactcaagagagcgcag
gagagtcagaaggagatgaagctcctgttggacatgtaccgctcatcgccaaaggaacag
agggacaaagttcagctgatggcatcagagaagagggcaaaggcagagctggagagcctg
aggcagaggctgaaggagctggaggagaaggagagacatgagggcaagaagatggcggac
gtggaggctctgcgccggatgaagctggtggatgaacaaatggaacacatgctgaaaaag
gtcgccatggcgaagcaggaggaggaagctctcctgtcggagatggatgtgactggccag
gcgtttgaggacatgcaggaacagaacatccggctgatgcagcagcttcgagaaaaggac
gacgcgaacttcaagctgatgtctgagcgaatcaaatccaaccagatccacaaactgctg
aaggaggagaaggaggagctgggagaccagatgctgaccttaaaaacacaggttgacgcc
cagctccaggtagtgaagaagttggaagagaaggagcagttactgcagacgaacctgacg
gccatggagaaggagctctccctgcgaacccagaccctggacatgcacaagcgcaaggtg
aggggacagggagctgggggccttccctcctctccaatcccagcaggtgggctcgtccgc
ggcagcaactcatgtcacagaagcagtttcatttttgagcacattcttatgtccctctcc
ccctccccctccctccccctgtgtctcggtgaccaggcgaagctgacctgcccgtgctgt
aacatgagaaagaaggatgctgtgctgaccaagtgcttccatgttttctgcttcgagtgc
gtcaagactcgttatgacacacgccagcgcaagtgccccaagtgtaacgctgccttcggt
gccaacgattttcaccggatctacattggctga
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