Chiloscyllium plagiosum (whitespotted bambooshark): 122541727
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Entry
122541727 CDS
T08871
Symbol
vcla
Name
(RefSeq) vinculin a
KO
K05700
vinculin
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04510
Focal adhesion
cpla04520
Adherens junction
cpla04810
Regulation of actin cytoskeleton
cpla04820
Cytoskeleton in muscle cells
cpla05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122541727 (vcla)
04520 Adherens junction
122541727 (vcla)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122541727 (vcla)
04810 Regulation of actin cytoskeleton
122541727 (vcla)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
122541727 (vcla)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpla04812
]
122541727 (vcla)
04147 Exosome [BR:
cpla04147
]
122541727 (vcla)
Cytoskeleton proteins [BR:
cpla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
122541727 (vcla)
Exosome [BR:
cpla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122541727 (vcla)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Harpin
Mob_Pre
DASH_Spc34
Motif
Other DBs
NCBI-GeneID:
122541727
NCBI-ProteinID:
XP_043534550
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All DBs
Position
38:complement(14299255..14417178)
Genome browser
AA seq
1098 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTGPVAAVQAAVSNLVRVGKE
TVQTTEDQVMKRDMPPAFIKVENACTKLIQAAQMLKDNPYAVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAIKIFVTTKQFKSQGVEEALKNRNFTVEKMSTE
INEIIRVLQLTSWDEDAWASKDTETMRRALAMIDSKMDQAKSWLSDPNAPPGDAGEQAIK
QILDEAGKVGELCAGKERREILGTTKALGQLTDQVSELRARGQGATPIAMQKAQQVSQGL
DMLTAKVENAARKLEAMTNSKQAIAKKIDAAQSWLADPHGGPEGEEHIRGILTEAKRIAD
LCEDPKERDDILRSINEIGALTAKLSDLKRQGKGDTPEARALAKQIATTLQNLQTKANRA
VANSRPVKAAVNLEGKIEQAQRWIDNPTVDGRGVVLRFVCKKDNFKVAAGKITELQMDLK
GKMQEVMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEVFEERAAYFENHAARLGATA
EKAAAVGAANKSTVEGIQTAVKSARELTPQVVSAARILLRNPGNQAANEHFETMKNQWID
NVEKMTGLVDEAIDTRSLLDASEEAIKKDIDKCKVAMANVQPQMLVAGATSIARRANRIL
LVAKREVENSEDPKFRESVKAASDDLSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRI
LGAVAKVREAFQPQEPEFPPPPPDLDQLHLNDEPAPPKPPLPEGQVPPPRPPPPEEKDEE
FPEMKAGEVVNQPMMESARQLHDEARKWSSKPDVTDEASEAIEADVDVYDGDDDDDDDDD
VELTLPSDNEDEYEPELLLMPPNQPVNQPILAAAQSLHREARKWSSKGNDIIGAAKRMAL
LMAEMSRLVRGGSGNKRALIHCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERI
PTISTQLKILSTVKATMLGRTNISEEESEQATEMLVHNAQNLMQSVKETVREAEAASIKI
RTDAGFTLRWVRKTPWYQ
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgtttcacacgaaaacgatagaaagtatcctggagccagtggctcaacaaatt
tctcatcttgtgattatgcatgaagagggtgaagtcgatgggaaagcaatacctgacctt
accggtcccgttgctgcagtacaggcagctgtcagcaatctggtcagggttgggaaagag
acagtacagacaactgaagatcaggtcatgaagagagatatgccaccagctttcattaag
gttgaaaatgcctgcactaaattgatccaggctgcacagatgctgaaggacaatccatat
gctgtacctgcacgtgattacctcattgatggttccagaggtattctttctggaacttca
gacttactgttgacatttgatgaagcggaggttcgtaaaatcatccgtgtctgcaaaggt
atcttggaatatctcacagtagcagaagtggtcgaaactatggaggatttggtgacctac
accaaaaatttgggtccaggaatgactaaaatggctaagatgatagatgaaagacaacag
gaattgacccatcaagagcacagggttatgctggtaaattccatgaacacagtgaaagaa
cttcttcctgtactgatttcagctattaagatttttgtgacgacaaagcagttcaaaagc
caaggagtggaagaagctctcaagaaccgtaatttcactgtggaaaagatgagtaccgaa
atcaatgaaatcattcgtgttctgcagctaacatcttgggatgaagatgcttgggctagc
aaggatacagaaactatgagaagagctttagctatgattgactcaaagatggaccaggcc
aagagctggctaagtgatcctaatgcacctccaggtgatgctggggagcaggctatcaaa
caaatactggatgaagctggcaaagttggagaactttgtgcaggcaaagaacgaagggaa
attctaggcactacgaaagctttaggccagttgactgaccaagtatctgaactccgagcc
agaggtcaaggggctacacctattgccatgcaaaaagcacagcaagtatcccaaggactc
gatatgttaacagccaaggtggagaatgcagccaggaagctggaggcaatgactaattca
aaacaggctattgccaaaaaaatagatgctgctcagagctggttggcagatccacatgga
ggccctgaaggagaagagcacatccgtggtattttaacagaagctaagagaattgcagat
ctttgtgaagaccccaaagaacgagatgatatactacgttcgattaatgaaataggagca
ttgacagccaagctgtctgacctgaaaaggcaaggtaaaggtgataccccagaagcacgt
gctttggcaaagcaaattgcaaccacactacagaacttacagaccaaggcaaaccgagca
gtggccaatagtaggcctgtaaaagcagcagtcaatttggaaggcaaaatagagcaagcc
cagcgctggattgataatcctacagttgatgggcgtggtgtggtgctacggtttgtttgt
aagaaggacaattttaaagtagcagcaggaaaaatcactgagctccagatggatctaaaa
ggcaaaatgcaagaagtcatgacccaggaagtatctgatgtttttagtgacactaccact
ccaattaagttgcttgctgtagcagccacagctccaccagatgcaccaaacagagaagag
gtgttcgaagagagggcagcatattttgagaaccatgctgccagacttggtgccacggca
gagaaagctgctgctgttggggctgcaaataaaagcaccgtagaaggtatacagacagct
gtgaaatctgcccgggagttaacaccacaggtggtttcagctgctcgcatcttgttgaga
aatcctggtaaccaagcagcaaatgaacattttgaaaccatgaaaaaccagtggattgat
aatgttgagaaaatgacaggtttggtggatgaagcgattgacaccaggtctcttctggat
gcctctgaggaagctatcaagaaagacatagacaagtgcaaggtagccatggctaacgta
cagccccaaatgctggttgctggagcaacaagcattgcccgtcgtgcaaaccgaattctt
ttggttgctaagagagaagtcgaaaattcagaagacccaaaattccgtgaatcagtgaaa
gcagcatctgatgatctcagcaagactatctctcctatggtaatggatgctaaagctgtt
gctgggaacatttcagatcctggtttgcagaaaagtttcttggattcaggatatcgaatt
ttaggtgctgtagctaaagttagagaagccttccaacctcaagaaccagaatttcctcct
cctccacctgatcttgatcaacttcatttgaatgatgaacctgctcctcccaaaccacca
cttcctgagggtcaagttcctccaccaagaccacctccccctgaggaaaaagatgaagaa
ttccctgaaatgaaagctggagaagtagtcaatcagcctatgatggagtctgctaggcag
ttgcacgatgaagccagaaagtggtctagcaagcctgatgtgactgatgaggcaagtgaa
gcaattgaggctgatgtagatgtgtatgatggtgatgatgatgatgatgatgacgatgat
gttgagttgactcttccctctgataatgaagatgagtacgaacctgagctacttttaatg
cctccaaatcagccagttaaccagccaattctggctgcggctcaatctttgcaccgagaa
gcaagaaaatggtctagtaagggtaatgacattattggtgctgcgaagaggatggctttg
ttgatggcagaaatgtcacgactggtgcgtggtggtagtggaaacaaacgtgccctcatt
cactgtgctaaagacatagctaaggcatctgacgaagtgacacgattggcaaaggaagtt
gctaaacaatgtactgataagcgaatcaggactaaccttcttcaggtgtgtgaacgcatc
ccaactatcagtacgcaacttaaaattctttctactgtgaaagctacaatgttgggacgc
actaatattagtgaagaggagtctgagcaggctacggaaatgttggttcataatgctcag
aacctgatgcagtctgttaaggaaactgtacgagaagcagaggcagcttccattaagatc
agaacagatgcaggattcaccctccgttgggttcggaaaactccatggtaccaataa
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