Chiloscyllium plagiosum (whitespotted bambooshark): 122541737
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Entry
122541737 CDS
T08871
Symbol
bms1
Name
(RefSeq) ribosome biogenesis protein BMS1 homolog
KO
K14569
ribosome biogenesis protein BMS1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122541737 (bms1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpla03009
]
122541737 (bms1)
Ribosome biogenesis [BR:
cpla03009
]
Eukaryotic type
90S particles
GTPase
122541737 (bms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
Tsr1_G-like
MMR_HSR1
AAA_22
RNA_helicase
AAA_16
nSTAND3
PduV-EutP
Motif
Other DBs
NCBI-GeneID:
122541737
NCBI-ProteinID:
XP_043534563
LinkDB
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Position
38:complement(316261..434005)
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AA seq
1235 aa
AA seq
DB search
MEEVQKKAHRKRHSGPKAARKKQRRLKGLGIEDEVDPQKRNPKAFTVQSAVRMAKTFHRA
QDLKTKKHHIPVVDRTPLEPPPIVVVVMGPPKVGKSTLIRCLIRNFTKQKLTNIRGPVTV
ITGKKRRISIMECGNDMNSMIDLAKVADLVLMLTDASFGFEMETFEFLNICQVHGFPKIM
GVLTHLDTFKNSKQLKKTKKRLKHRFWTEVYQGAKLFYLSGMVHGEYQKQEIHNLGRFIS
VMKFRPLVWQMAHPYVLADRMEDLTNPEDIRKNQKCDRKVSLYGYLRGTYLKNNSQIHIP
GVGDFTLNEVGFLPDPCPLPEQQKKRSLHEKEKLIYAPMSGVGGIVYDKDAVYIDLGGSH
IDREEEEEQRPNYDLVQSLVAARSTIDTKMASSKVSLFVDSKPLASEELEENGYLMPKEE
KVIDSETGRVRRRAVFKEEMAKSGEEESDTESEAEIGNQDQIDCQREIYPRPLKVFKLEE
KESEAATERPAFDDSDDFEMDSEAEVTDEEDDDSDEEEDLACESEEDFMYSNKKLQTSVI
KQNLERMLDSKQKAERLSLNLENNTSDESENDLDSTVEQTEEASEIVENEMPSRDCSDSE
EHYEDYEEKTMSNVETTGSLKWKEGLAQRAANVFLKQQAALNLQKLVYGAVNEKDEVDQE
GDDTLGGIFHVSRPDKESKKNINSLDSSVFHVKNPHDWDLAEVMNSIRDCFVTGKWETEK
DASTLLDEDDSVYGAFEDLETGEVHTGQPGDLKQHHEGEEDGEGNRDPRNTEEEAERTKR
LEKKRKLKEMFDMDYDDGEGTYFHDLKDEMQKQAQLNRAEFDDQDDATRVQYEGFRPGMY
IRAEIENVPYEFVTNFDSCYPLILGGLGNSEGNIGYLQMRLKKHRWHKKILKTRDPLIFS
LGWRRFQTIPMYYIEDHNGRHRLIKYTPEHMHCSATFWGPITPQGSGFLAIQSVAGTSQD
FRIAATGVVLDLDKSVTIVKKLKLVGFPFKIYKNTAFIKGMFNSALEVAKFENASLRTVS
GLRGQLKKALRTPEGGFRASFEDKLLMSDIVFLRTWFPVSVPKLYNPVTSLLRPSGEKET
WTGMRTVGQLKHDWGIKTKPNKDSLYRPIERKMKHFNPLHIPKALQRALPFKSKPKNQEK
LAKETRDKKRVAVIKSAHEKKISALLTALSTVNAYKVQKERKKEHQQHKEFLAEKRKQEE
AKVKRQKEARKKIHRMLGQKEKRRMKSSLKGQKEA
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtgcagaagaaggcacatcgtaaacggcacagtggacctaaggcagcaaga
aagaagcagcggcgtctgaagggactgggtatcgaagatgaagtcgatccacagaagaga
aatcccaaggctttcactgtccagagtgcagtgcgcatggcgaaaacctttcacagggct
caggacttgaaaactaaaaagcaccatatccctgtggttgaccggacaccattggagccc
ccaccgattgtcgttgttgtcatgggacccccaaaagttggaaagagtacactcattcga
tgccttattcgaaatttcacgaagcaaaagctaacgaacatcaggggcccagtaactgta
attacaggaaaaaagcgccgtatctccatcatggaatgtgggaatgatatgaactcgatg
atcgatttggccaaagtggctgatctggttttaatgctgactgatgcgagctttggcttt
gagatggagacatttgagttcctgaacatctgtcaagttcatggctttcccaaaatcatg
ggggtcctcacccatttagacaccttcaaaaacagcaaacagctgaagaagaccaagaaa
agactgaagcaccggttctggacagaggtctatcagggtgctaagctgttttacctctca
ggtatggtccatggagaatatcagaaacaggaaattcacaatctgggccgatttatttct
gtgatgaagttccggccattggtgtggcaaatggcacatccttatgttttggctgacaga
atggaagatctgaccaatcctgaggacatacgcaaaaaccaaaagtgtgaccgtaaagtt
tcattatatgggtacctgcgtgggacatacctcaagaacaacagtcagattcacattcca
ggtgtgggtgacttcacattgaatgaagttggtttccttccagatccctgccccctcccg
gagcagcagaagaaacgttccctgcatgagaaagaaaagctgatctatgccccaatgtct
ggtgttgggggtattgtttatgataaggacgctgtatatatcgatcttggtgggagccac
atagaccgtgaggaggaggaagaacaaaggccaaactacgatttggtgcagagtctcgtc
gcagcacgcagcaccattgataccaagatggcatctagcaaagtctctcttttcgtggac
tcaaagccacttgcatctgaggaattggaagaaaatggatacctgatgcctaaagaggag
aaagtgattgactcagagactgggcgggtgcgacgcagagctgtctttaaagaagaaatg
gctaaaagtggggaagaagagtctgatactgaaagtgaggcagagattggcaatcaagac
caaattgattgccaaagagaaatttatccccgacctcttaaagttttcaagctagaggag
aaagagtcagaagctgctactgaaagacctgcatttgatgactctgatgattttgaaatg
gattcagaagcagaggtgactgatgaggaagatgatgattctgatgaggaagaggacttg
gcttgtgaatctgaagaagattttatgtattctaataaaaaattacagacatcagtgatt
aaacaaaatttggaaagaatgttggacagcaagcagaaagctgagagactaagcttaaac
ttggagaacaatacttctgatgaaagtgaaaatgatttggactccacagtggaacagaca
gaagaagcatctgagatagtggaaaacgagatgccgagccgagattgcagtgacagtgag
gaacattatgaagattatgaagaaaagaccatgtcaaatgtagaaacaacgggatcatta
aagtggaaagaaggactggctcagcgagcagctaatgtcttcttaaagcaacaggcagct
ctgaaccttcagaaactggtctatggagcagtaaatgaaaaagatgaggtggatcaggaa
ggtgatgatacgttgggaggtatctttcatgtaagcaggcctgacaaagaatccaaaaag
aacatcaatagtttggactcctcagtatttcatgtgaaaaaccctcatgactgggacctg
gcagaggtgatgaacagtatccgggattgttttgtgactggaaaatgggaaactgaaaag
gatgcgagcactctccttgacgaagatgattctgtatatggagcatttgaggatctggag
acaggagaggttcatacagggcagcctggggacctaaaacaacaccatgagggtgaggaa
gacggtgaaggaaatcgtgatcccagaaatacagaggaggaagcggaacggaccaaacgt
ttggagaaaaagcggaaattgaaggaaatgtttgatatggactatgatgatggcgaagga
acctactttcatgatcttaaagatgaaatgcagaagcaggcgcagcttaaccgtgcagag
tttgatgaccaagatgatgcgactcgagttcagtatgaaggttttcgacctggaatgtac
atacgggcggagattgagaatgtgccctatgagtttgtgacaaattttgattcctgctat
ccattaattctcggtggcttgggaaacagtgaaggaaatattggataccttcagatgcgt
ttgaagaaacaccgatggcacaagaagattctgaagacgagagaccctctaatcttttcc
cttggctggaggcgctttcagaccatcccgatgtattacattgaggaccataatggacgt
cacagactgatcaagtacacacctgagcacatgcactgctctgcaactttctggggtccg
atcactccgcaaggctcagggtttctcgctattcaatctgtggctggtacttcgcaagat
ttcagaatcgcagcaacaggcgtagtgctggatctcgataagtctgtaaccattgttaaa
aaactcaagctggtggggttcccattcaagatatacaagaatacagccttcataaaggga
atgtttaactctgcattggaagttgctaaatttgagaatgcttcgctccgaactgtgagt
ggactacgtggtcaactgaaaaaagctcttcgtaccccagagggaggattccgtgcctcc
tttgaggacaaattgctgatgagtgatattgttttcctgaggacgtggtttccagtttcg
gtgccaaagttgtataatccagtcacatcattgctgagaccaagtggtgagaaggagacc
tggactggaatgagaactgtcggacaactcaaacatgattggggcattaagacgaagcca
aacaaagattccttgtacaggcccatcgagaggaaaatgaaacatttcaatcccctccac
atccccaaggcactgcagagagccctgccctttaaaagcaagcctaaaaatcaagaaaaa
ctggccaaggagacgcgggataaaaagcgggttgctgttatcaaaagtgcacatgagaaa
aagatctcagccctgcttactgctctgagcacagtgaatgcttacaaagtgcagaaagaa
cgtaaaaaggaacaccagcagcacaaagagtttcttgcagagaaacgcaaacaggaagag
gctaaggttaaaaggcagaaagaagctcgcaagaagatccatcgtatgctgggtcagaag
gagaagcgcagaatgaaatccagcctgaaaggacagaaagaagcctga
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