Chiloscyllium plagiosum (whitespotted bambooshark): 122541782
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Entry
122541782 CDS
T08871
Symbol
sec31b
Name
(RefSeq) protein transport protein Sec31A isoform X1
KO
K14005
protein transport protein SEC31
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122541782 (sec31b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122541782 (sec31b)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cpla02044
]
122541782 (sec31b)
Membrane trafficking [BR:
cpla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
122541782 (sec31b)
Secretion system [BR:
cpla02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
122541782 (sec31b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
EIF3I
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_HPS5
TPR_Sec16
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
Beta-prop_IFT140_1st
Prp18
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
122541782
NCBI-ProteinID:
XP_043534684
LinkDB
All DBs
Position
38:6992657..7081285
Genome browser
AA seq
1243 aa
AA seq
DB search
MKLKEIERTAIQSWSPASHHPLYLATGTSAQQLDATFSTSAALEIYELDFSDPSLDAKLR
GSLPATSRFHKLIWSNYGTSSNGVIAAGGDTGTITLYNAEQILELGSDPIIGQSEKHAGP
VRGLDFNPFQNNLMASGANDSEIYIWDLNNFNTPMTPGAKSQQREPSEDISCVAWNRQVQ
HILASAHPSGRAVVWDLRKNEPIIKVSDHSSRMRCSGMAWNPEVATQLVLASEDDRMPIL
QIWDLRFATSPLKVLENHTRGILSISWCQADAELLLSSAKDNRILCWNPNTGEVVYELPT
SSQWCFDVQWCPRNPAVLSAASFDGRISVYSVMGGSLEAQKQSHVDKISSSFNNLDPFGT
GQTLSLLDIPQKSVPPTVVLPLKKPPKWIRRPVGASFAFGGKLITFSNPKASPPQIQQPV
ARQVFVSVVTTETEFLHRSNELQTALRSEAFVQYCQSKINTAPTDFDKNIWNFLKVNFEQ
DPRTKYLNLLGYSKEGLDKQIASALGNSARLKSLEVEANERVQKTPGVSSQSSSSEESVA
AGDASTTSDFFDNIPGERPLFEIPVTGDTEGLISQALLIGNFEGAVELCLKDDHFADAII
LAIAGGEELLAQTQNRYFAKRKTKISRLVSSVVTHNWRDIVESCDLDNWKEALAALLTYA
KPEVFPLLCDTLGSRLEMENEGKLCIQACLCYICSGNVEKLVECWVKTHESSTPLALEDL
VEKIMILQKAIELLQGTDMAAEGPVFAKKLTQYASLLAAQGSLEAAMSYLPTTSNQFTVL
QLRDRLFHAQGEAMAGQQPPTFPFNHVVTKSTRPTSTPAPTPARQTPPQRPIQQPAQQTQ
FQTFSSQTPICPSAPTVFTPQPTPVAPPSAIPVQGISGSTTNIYSKPGATRPTYPQHPTT
TTAPAFSQFQNFGQPKVPPSGLPAYPLQNPLPGSGLTGPSLPTASLSGPTIPGVYMPGPS
LMTPASMPSYPSSNTLPPSHTVQPGPLPTYPSHHYQPQPPTSLPGIQSTFPHPSGTGVPG
APSSKQFTSAAVPPPPQTGFLPWLQNRSCASGFQDGWNDPPAVRAGQRKKMLPDNYTPPA
PITAPVVNFPADVQQLPPQGFTPQEISQGPPGAPKEANLQPLQQLPTEKIVKKQIPEEHM
VLKTTFDGLVQRCLLAAGDPQTKRKLDDAAKRLEYLYDKLREQTLSPHILGGLHEIVRNI
EGCNYQQALMVHTHVVSSSNFSEISAFMPVLKVVVTIANKLNI
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaaggagattgagaggacagccattcagtcctggagtcctgcttctcaccat
ccactctatttggctacaggtacctcagctcaacagttggatgctacctttagcacaagt
gctgcgctggagatctatgagctcgatttttcagatccttcactggatgcaaaattgcga
gggagcttacctgctaccagtagatttcacaagctgatctggagtaactatggcacaagc
tccaatggagtcatagcagcaggtggagatacaggaaccatcaccctttacaatgcagag
cagattcttgaattgggaagtgatcccatcattggacaaagtgagaagcatgcaggtcct
gttcgaggactggattttaatcctttccagaataatctaatggcttctggagctaatgat
tctgaaatttatatttgggatttaaataatttcaacacaccaatgacaccaggagcaaag
tcccagcaaagagagccttctgaggatatcagctgtgtagcctggaatcgacaggtgcag
cacatcctggcttcagcccatccaagtggcagagctgtggtatgggatctaagaaagaat
gaacctatcatcaaagtcagtgatcacagcagcagaatgcgttgttctggaatggcctgg
aaccctgaagttgcaactcaacttgttcttgcatcagaagatgatcgaatgcctatactg
cagatatgggacttgaggtttgccacgtctcccctcaaggtgttggagaatcataccagg
ggtattctttccatatcgtggtgtcaagccgatgcagagttgctcctaagcagtgcaaaa
gacaataggatcttatgctggaatcccaacactggagaggtggtctacgagctgccaaca
agcagtcagtggtgttttgatgtccagtggtgcccgcggaacccagcagtcctctcagct
gcttcctttgatggacgaatcagtgtttattctgtcatgggagggagtctggaagcacag
aaacaaagccatgttgataaaatttcttcctcattcaacaatctggacccatttggaaca
gggcagactctttctcttctagatatcccacagaaatccgttccacccacagtggtgctt
cctttgaaaaaaccccccaaatggatccgtcgacctgtgggagcatcatttgcttttgga
gggaagctgatcactttttccaacccgaaagcgtctccaccacagatacagcaacctgtt
gcgcgtcaagtgtttgtcagtgtggttactacagagacagagtttttgcaccgttccaac
gaactccagacagctctccggtcagaggcttttgttcagtattgtcagtctaagattaat
actgctcctacagattttgacaagaacatctggaacttcttaaaggtaaactttgaacaa
gaccctcggacaaaatacttgaatttgcttggctacagtaaggaaggattggataagcag
atcgcctcggctctaggtaacagtgcacgattgaaaagtctagaagtggaagctaatgaa
cgagtacagaagacgccaggtgtctctagtcagagttcgagctctgaggagtctgtagct
gcgggggatgcctcaacaacttctgacttctttgacaatattccaggggaaagacctctc
tttgaaatccctgtcacaggagatactgaggggttgatcagccaagccttgctaataggg
aactttgaaggtgctgttgaactttgtctaaaagatgaccatttcgctgatgccatcatt
ctcgctatagctggaggagaagagcttcttgctcaaacacagaaccgatattttgcaaaa
aggaagacaaaaatttcacggctcgtgtcctctgtagtcacccacaactggagggatatt
gttgaatcctgtgacttagataattggaaagaagctttggctgctctcttaacttacgcc
aaacctgaggtgttccctttactatgtgataccctaggatcccgtctagaaatggagaat
gagggaaagctatgcatacaggcatgtctttgctacatctgctccggaaatgttgagaaa
ctggtagaatgttgggttaaaactcatgaaagctcgactccacttgcactcgaggacctc
gtggaaaagattatgatcttacaaaaagcaattgagttactccagggcacagacatggct
gcagagggcccagtctttgcaaagaaactcacgcagtatgccagcttactggccgcacaa
ggaagtttggaagcagcaatgagctacctcccgacaacttcaaatcagtttacagttctc
cagctccgtgatcggctattccatgctcagggagaagctatggcaggtcaacagcctccc
acatttccctttaatcatgttgtaacgaaaagtacacgtccaacttccactcctgcaccc
actccagctcgacaaacaccaccacaaagaccaatacagcaacccgcccagcagactcag
tttcagacctttagttctcagaccccaatctgtccgtcagctccaacagtattcactccc
cagcctaccccagttgcacctccatctgccatccctgttcaaggcatttctgggagtacc
accaacatctactccaaaccaggagcaactcgtcccacctacccacagcatcctaccaca
accactgcaccagccttttcacagttccagaattttggacagccaaaggttcctccaagt
ggactcccagcctatcctcttcagaatcctttgccaggttcagggttgactggcccatct
ctacctacagcctctctgagtggtccaacaattcctggtgtctacatgccagggccatcg
ctaatgacccctgcctctatgccatcctatccatcgtctaatacactgccacccagccac
acagtacaacctgggccactgccaacttacccatctcaccattatcaaccccaacctcct
acatctctaccaggcattcagtccaccttccctcacccctctggaacaggagtccctgga
gctccgtcctccaagcagttcacatctgcggcagttcctcctcctcctcaaacaggattc
cttccatggctacaaaaccgctcttgtgcatcagggttccaggatggatggaatgacccc
ccggcagtacgagcagggcaaaggaagaaaatgctacctgacaactatactcctccagct
cccattactgctcctgttgtgaatttccctgcagatgtccaacagcttccaccccagggc
tttacgcctcaggaaatcagtcaaggacctccaggggcaccaaaggaggccaatttacag
ccactacagcagctgcccacagagaagattgtgaaaaaacaaatcccagaagagcacatg
gtgttgaagacgacctttgatggtctggtacagcgatgccttttagctgctggtgaccct
caaactaagaggaagttggatgatgctgcaaagcgcctggaatacctgtatgataaattg
cgggagcagacgctttctcctcacattctgggtggactgcatgaaattgtgcggaacatc
gaaggatgcaattaccagcaagcgttgatggttcacacgcacgttgtgagcagcagcaat
tttagcgagatctctgcctttatgccggtcctgaaagtggttgtcacgatcgcaaacaaa
ctcaacatctga
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integrated database retrieval system
