Chiloscyllium plagiosum (whitespotted bambooshark): 122541821
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Entry
122541821 CDS
T08871
Symbol
ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
122541821 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122541821 (ercc6)
03400 DNA repair and recombination proteins [BR:
cpla03400
]
122541821 (ercc6)
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
122541821 (ercc6)
DNA repair and recombination proteins [BR:
cpla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
122541821 (ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
Spt5-NGN
AAA_14
Motif
Other DBs
NCBI-GeneID:
122541821
NCBI-ProteinID:
XP_043534775
LinkDB
All DBs
Position
38:complement(11546646..11602060)
Genome browser
AA seq
1546 aa
AA seq
DB search
MTHGLELCDPEVGTLPWCHEQCFCMLFACSKFLTKSIRSVSPMNRLYKMPTAGVPAADDS
AGCCRPGVADSEAHFISAAPQTLQDNGFLASYPDAPADCDTSDSRPSTSTAFHAADTRST
QKIVQIDRQQIQAVDQSAQALELRGLGVDVYDQDVLEQGVLQQVDRAISEASQAAKRADA
EKEYCSVLDDLRSTTICLKQTNKIIEQLTPHAATNKEVRRKLESVKRQKDNKERQLKKIR
AKQKHLQAVLSGADIQKLEAEYESCDEEPGPSSLGSMLMPAQETEWEHLIRTGQMTPFGT
KIPQKETKKEPRKIMLNDASDFEKYLADQAKMAAIRRKSFTKRAKRRKTAVSVQAETETS
DDKTQNPKGGPKKNSTVSRTDRKLKKHLQKLQRKTLEIKFKAGAPIKKNSLQELVGGRED
RGSDSEESLYVPDEELLYPDEFGNSDDEVSDNGTFKKAPKKRQKQSHSDEAFSPSSGEDE
SRRRIKAHKDDGNEELYRKRLRKWKRKRLMEKAEQQANGEGAESDESDAEFDEGFKVPGF
FWRKLYKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYR
YEGLGPVVIVCPATVMHQWVKEFHTWWPPFRVAVLHETGSFTSRKERLIREIAACNGILI
TSYSYVRIMQESIAHYNWHYVILDEGHKIRNPNAAITVACKQFRTPHRIILSGSPMQNNL
KELWSLFDFIFPGKLGTLQVFMEQFSVPITMGGYQNASPVQVQTAYKCACVLRDTINPYL
LRRIKADVKMNLALPDKNEQVLFCRLTEEQREVYQNFIDSKEVYQILNREMQVFSGLIAL
RKICNHPDLFSGGPKILKGVPDEQLTEEEHFGYWKRSGKMIVVDALLKLWYKQGHRVLLF
SQSRQMLDILEVFIRNLGYSYLKMDGTTSVGSRQTLISRYNENSSIFVFLLTTRVGGLGV
NLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTIYRLLTAGSIEEKIYHRQIFKQF
LTNRVLKDPKQRRFFKSNDLTELFTLSSPDGTQGTETSAIFAGTGSDVYAPTRKKTGKSS
SSFRKRNVMLSDQDSSKQVKLPPDLSLQCHSDKSQSGKLSVNPQTELKENSVFGSGGTVT
QVKQEIKSAEFPTVSQSEYRRLDQPTNSAHKETDNNNVESALSNKAGLLDHGHTPGQIIL
NEERKDCTQNSEKLQNISSADLEETGNSHELHHKHQSKTKHQITKSEHDDALSVYKHKHK
KHKRHKDAYFEGERIPHLVKRQKIKKRDHEEEQKEKEVCRQSDDYVLEKLFKKSGIHSVM
KHDVIMESSNPDYVLVEAEANRVAQEALKALKASRQRCLGVSSGVPSRINSSQLSGTAAA
VKPRFGQKKNPLLPTSSPSSKSTPEKCKDAAVIEKDEAAKSHFSGVPSEEEAGRVLPSSS
SLLAKMRARNHLTLSQSLEIDESSEPAAVPPPVPTEHDELLVEMRNFIAFQASTDGQATT
TELLQEFQSKLSPAQTAVFRELLRNLCTFHRNASGDGIWTLKLEFR
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atgacccatggacttgaactttgtgacccagaggtagggacattgccatggtgccatgaa
caatgtttttgtatgttatttgcgtgctcaaagtttttaactaaatccattcgctctgtc
tctccaatgaacagattatataaaatgccgaccgcaggagttcctgcagctgatgattca
gcaggttgctgcagaccaggtgtggctgattctgaagctcacttcatttcggcggctccc
cagactcttcaagataatggattcttggctagttatccggatgctcctgctgactgtgac
acctcggatagcagaccatccacttccactgccttccatgctgccgacacaaggagcact
cagaaaatcgtccagattgatcggcagcagatccaagccgtggaccagagtgcccaggct
ctggagctgcgaggtctcggagttgatgtctacgaccaggatgtattggagcagggggtt
ctccagcaagtggacagagcgattagtgaagccagtcaagccgccaaaagagcagatgca
gagaaagagtactgttctgttttagatgatctgaggtccaccaccatctgtctgaagcaa
acaaataagatcattgagcagttgactcctcatgctgctacaaacaaggaagtaaggaga
aagctggagtctgtgaaaaggcagaaggataacaaggaaagacagttgaaaaagataagg
gccaaacagaaacacctccaggcagtgctcagtggtgctgacattcagaagcttgaagct
gaatacgaatcgtgcgatgaagaaccaggtccttcatcgttaggaagtatgttaatgccg
gcacaggaaacagaatgggagcatctcatccgcaccggacagatgacacccttcggcact
aaaatacctcagaaagaaacaaaaaaggagcctcgcaagatcatgctgaatgacgcatca
gactttgagaagtatctggccgatcaggcaaagatggctgcgattcggaggaagtccttc
acaaaaagagccaagaggagaaaaacagcagtgtctgtgcaggccgaaactgagacatca
gatgacaaaactcaaaatccaaaaggtggccccaagaaaaatagcactgtgtcaagaaca
gaccgcaaactgaaaaagcatttgcagaaactgcagcgcaagactcttgagattaaattt
aaagctggagctccaatcaagaagaactccctgcaagagttggtgggagggcgagaagac
agaggctcagacagtgaagagtcactctatgttcctgatgaggagttactttatccagat
gaatttggtaacagcgatgatgaagtgtccgataatggcacatttaagaaagcaccaaag
aaaaggcaaaagcagagtcactcagatgaagctttctcaccaagctcaggcgaagatgaa
tcgagacgcagaataaaagcacacaaggatgatggaaatgaagagctgtacaggaaaaga
ttgaggaagtggaaaaggaagaggctgatggaaaaggcagagcagcaagctaatggcgaa
ggtgcagagtctgacgaaagcgatgccgaatttgatgaggggttcaaggtgcctggcttc
ttttggagaaagctatacaagtatcagcagacaggtgttcgttggctttgggaattacac
tgccaacaggcaggaggaattttgggggatgaaatgggactgggcaagaccatccagata
attgccttcttggcaggcctgagctacagcaagataaggacacgaggctcaaattacaga
tatgagggcttgggtcctgtggtcattgtttgcccagcaacagtgatgcaccagtgggtg
aaagaattccacacatggtggccaccattcagagtagcagtcctgcatgagacgggttcc
ttcaccagcaggaaggagaggctcattcgagaaattgcggcatgtaatggtattctgatc
acctcgtattcctacgtccgaattatgcaggagtccattgcgcactataactggcattat
gtaattttagatgaagggcacaagatacgaaatccaaacgctgcaattactgttgcgtgt
aaacagtttcgcactccacatcgcattatcctgtctggttcgccgatgcagaataacttg
aaggagctctggtctttatttgacttcatttttccaggaaagctaggaacattgcaagtc
ttcatggaacaattttctgtccctatcacaatgggaggctatcaaaatgcctcacctgtt
caggtgcaaactgcctataagtgtgcttgtgttttacgggacaccataaatccatacttg
ttgcgacgaattaaagccgatgtaaaaatgaatctggcattgccagacaagaatgaacag
gttctattttgtcgcttaacagaagaacaacgtgaagtctaccaaaactttatagattcc
aaggaagtctatcagattctcaacagagaaatgcaggtattctctggcctgatagctctc
agaaagatctgtaatcaccccgacctgttttctggtggccccaagattctgaagggggtg
cctgatgagcagctgacagaagaagagcactttgggtattggaaacgatctggaaagatg
attgtagtcgatgcgttgctaaagctgtggtacaaacaaggacatcgagtacttcttttc
tctcaatcccgacagatgttggacatcttggaggtgttcatacggaatctgggctattca
tatcttaaaatggatggaacaacttcagtaggttctagacagacactcatttctagatac
aatgagaattcctctatatttgtcttcctcctcacaactagagttggtggtttgggagta
aacttgacaggagcaaaccgcgttattatctacgaccctgactggaacccgagtactgac
acacaggcccgagagcgtgcttggaggataggtcaaaagaaacaggttactatttacagg
ttactaacagccggatcaattgaagaaaaaatctaccaccggcaaattttcaagcagttc
ctgactaatcgagtattgaaggacccaaagcagagacggtttttcaaatctaatgatctt
acagagcttttcacgttaagcagtccagatggtactcagggaacagaaacaagtgcaatt
tttgcaggcacaggttcggatgtttacgctcctaccagaaaaaaaactgggaaaagctcc
agttcattcaggaagagaaatgtcatgctatcagatcaggattccagcaagcaagtcaag
ttaccaccggatttgtctctccagtgccattcagacaaaagtcagtcaggaaaactttct
gttaacccacagactgaattaaaagagaatagtgtttttggcagtggtggaactgttact
caggtaaaacaagaaataaaaagtgctgaatttccaactgtttcacagtctgaatatcga
aggcttgatcaaccaaccaattctgcacataaggaaactgacaacaataacgtagaatct
gcactcagcaataaagctggactacttgatcatggccacacaccgggacaaatcattcta
aacgaggagaggaaagattgcactcagaactcagaaaaactgcaaaatataagtagcgct
gacttagaagaaactggcaacagccatgaacttcatcataaacaccaatctaaaacaaaa
catcaaataacgaagagtgagcacgatgatgctctttcagtgtacaaacacaaacacaaa
aaacacaaacgccacaaagatgcatattttgaaggcgagcgtatcccccacttggtaaaa
aggcagaaaatcaaaaagagggatcatgaggaagagcagaaagaaaaggaagtctgcagg
cagagtgatgattatgtcttggaaaagctgttcaaaaaatctggaatccacagtgtgatg
aagcatgatgttattatggagtcatccaatcctgattatgtattagttgaagcagaagct
aatcgagttgctcaggaggctttgaaagctttgaaggcttcgagacagcgttgcctgggt
gtctcttctggtgtgccatccaggatcaatagcagtcagctgtcaggaacagcagctgct
gtaaagccaagatttggtcagaagaaaaatccactgcttccaactagcagtccttcttcc
aaatccactccagaaaaatgcaaggatgctgctgtaattgaaaaggacgaagctgccaaa
tctcacttcagtggcgttccatcagaagaagaggcaggtcgtgtgctcccatcctcttcc
tcgttactggccaaaatgcgagcaaggaatcatttgactttgtctcaaagccttgaaatt
gatgagagctctgagcctgcagcagtgcccccgcctgtaccaaccgagcacgatgagcta
ttggtggaaatgaggaacttcattgcattccaggctagcactgatgggcaagccacaact
actgagttgttacaagagttccagtccaagttatcacctgcacagacagctgttttccga
gaacttcttagaaacttgtgcactttccacagaaacgcatctggggatgggatctggaca
ctgaaactagaattccgatga
DBGET
integrated database retrieval system
