Chiloscyllium plagiosum (whitespotted bambooshark): 122541921
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Entry
122541921 CDS
T08871
Name
(RefSeq) protein transport protein Sec24A-like isoform X1
KO
K14007
protein transport protein SEC24
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122541921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122541921
Membrane trafficking [BR:
cpla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
122541921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Fuz_longin_2
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
122541921
NCBI-ProteinID:
XP_043535078
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All DBs
Position
38:23858607..23913645
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AA seq
781 aa
AA seq
DB search
MDFQSSPAVQDTFCMEQLRESASDLNSQPGHMWPVNLLQQRDVPRAEPSTAPEPSLSTHL
RKLNCCSDVFQCTLVNIPQTLALLKQVKLPLGLIFQPFKDSREPPLLITDVPPRCSSCQT
YINPFTAFIDQQHWKCNVCFSLNDVPGNFLFDPMTGSYCNPRSRPELQHAAVEFMVPLEY
QAKRPRPVTYLFLFDVSYNAVETGYLAIVCKTLLENLDRLPGDSRTRIGFITFDNNVNFY
QLHSNLSRPRMMVFTEINDIFTPNEETLLVNLQQSRQLVVALLEEFPVAFRDTQKTLCAF
GPALQAAQKLLKFSGGRMTVFLTQLPNEGCGSLQPREDPGDSTLGAKHLGPATDFYKVLS
MEFCGQQIGVDLFLLNQQHIDLASLVCLPRYTCGYVYCYPAFHHIHSSALVEKLQEEFRN
HLTRSIGYEGLLRIRYTQGLMLDTFYGNSFLQTTQMLSLPYVRPQAEFAFQMMIDGAVTE
SSLVVFQSSLLYTSCQGERRVRIYTYCLPVVSSLSEVYAGANMAAITGILSKMAVDRSVS
LCLASTRDELIKVLIDALVAYRSSACSPKQSAFTIPRSLQQLPLYILALLKQPAFQTDAA
MSLDERVFTMFQLMIQPLTVVLRMVYPDLYRIDDYLNSEPADNASMEMGKGTMKKPALIQ
LMAENLTLQGAFLIDCGNVLYIWVGRHCNTSFLDGVLGVNNYTSLPGTLTSLPTLQNPAS
KLIQAFLGSLRKERLYHAPCFIIKDDSTSRSVFIKRLVDDRTETAMSYYEFLLHLKERVC
K
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggattttcagagcagcccagcagtgcaggatacgttctgcatggagcagttacgggag
tcagcgtctgacctgaactcccagccaggccacatgtggccagtcaacctccttcagcag
agagatgtcccacgggctgaaccatccacggcacctgagccaagcctcagcacccacctc
cggaaactgaactgctgctcagatgtgtttcagtgtacactggtgaatattccacagact
ctggcactgctgaaacaggtgaaacttcctctgggtctgatcttccaaccgttcaaggat
tccagggagcctccactgctgatcactgatgtcccccctcgctgctcgtcatgtcagacc
tacatcaaccccttcaccgccttcattgatcagcaacactggaaatgcaacgtttgtttc
tcactcaatgatgttcctgggaatttcctctttgatcccatgactggcagctactgtaac
ccacgcagtcgtcctgaactgcagcatgcagctgtggaattcatggtacctctagaatat
caggctaaacgccctcgacctgtaacatacctgtttctgtttgatgtcagctacaatgca
gtggaaactggttacctggcaattgtctgcaaaacgctgctggagaacctggacaggtta
ccaggtgattcacggacccggattgggttcattacatttgacaacaacgtgaacttctac
cagttgcacagcaacctgtctcgaccccgcatgatggtttttactgagattaatgatatc
ttcactccaaatgaagaaacattgttggtgaatcttcaacaaagccgacagcttgttgtc
gctctacttgaggaattcccggttgcgttcagagacactcagaagacattgtgtgcattt
ggacctgcactgcaggctgctcagaaactcctgaagttcagtggtgggcgcatgactgta
tttctcacccagttacccaatgaaggctgtgggtccttgcaaccccgggaggatcctggt
gatagtacactgggagctaagcatcttggtccagctactgatttctataaggtgctgtca
atggagttctgtggccagcagataggagtggacttattcttgttgaatcagcaacacatt
gaccttgcttccttagtttgccttcccaggtacacttgtggctatgtgtattgttaccca
gcattccaccatattcacagctcggctctggttgagaagctccaggaagaattccgaaat
cacctgacccgctccatcggatatgaggggctgctgaggatccgatacacacagggcctc
atgctggacactttctatggcaactcattcctacagacaacacagatgttatccttgccc
tatgttcgtccccaggcggagtttgcctttcagatgatgatcgatggagctgtgactgag
agctcactagtggtcttccagtcctctctactctacacttcatgccaaggtgaacgacgg
gttcgaatctacacttactgccttccggttgtcagctccctcagtgaggtttatgcaggg
gccaatatggctgccatcacaggaattctttcaaaaatggctgtggatcgttcagtgagt
ctctgccttgcttccacccgcgatgagctgattaaagtcctcattgatgctcttgtagct
taccgctcctcggcctgcagcccaaagcagtctgcgttcaccatcccccgtagcctacaa
caactgccactgtacatcctcgcccttttaaagcagcctgcctttcagaccgatgctgcc
atgagcttggatgagcgggttttcaccatgttccagctgatgatacagccactgaccgtt
gtattgaggatggtctaccctgatctgtacaggattgatgattaccttaactccgagcct
gcagataatgcctctatggaaatgggcaaggggacaatgaagaaaccagccttgattcag
ctcatggctgagaatctcacgctgcaaggagccttcttaatcgattgcggtaacgttctg
tacatctgggttggcagacactgtaacaccagcttcttggatggggtgttgggtgtcaac
aactacacctcactcccagggacactgacctcacttcccactctgcagaatcctgcttca
aaactcatccaggcattcctgggatccttaaggaaggagagactttatcatgcaccttgc
ttcatcatcaaggatgacagtacctcacggtccgtgttcattaagcgcctggttgatgac
cgcactgagacagcaatgtcatactatgagtttctgctccatctgaaggaacgggtgtgt
aagtga
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